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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS30041
         (311 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15577| Best HMM Match : Ribosomal_L28e (HMM E-Value=0.00022)        55   1e-08
SB_25068| Best HMM Match : PI-PLC-X (HMM E-Value=0)                    31   0.14 
SB_46512| Best HMM Match : TIL (HMM E-Value=1.3)                       27   2.3  
SB_45094| Best HMM Match : DUF1090 (HMM E-Value=1.6)                   27   2.3  
SB_184| Best HMM Match : PAN (HMM E-Value=4.1e-09)                     27   2.3  
SB_56125| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.1  
SB_41690| Best HMM Match : DSL (HMM E-Value=0)                         26   5.4  
SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0)                 26   5.4  
SB_10156| Best HMM Match : DSL (HMM E-Value=3.3e-35)                   26   5.4  
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.2  
SB_38679| Best HMM Match : Herpes_BLRF2 (HMM E-Value=2.6)              26   7.2  
SB_37763| Best HMM Match : rve (HMM E-Value=4.2e-27)                   26   7.2  
SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18)                       26   7.2  
SB_28225| Best HMM Match : YL1 (HMM E-Value=2.1)                       26   7.2  
SB_25066| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.2  
SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   9.5  
SB_39148| Best HMM Match : OEP (HMM E-Value=0.33)                      25   9.5  

>SB_15577| Best HMM Match : Ribosomal_L28e (HMM E-Value=0.00022)
          Length = 90

 Score = 54.8 bits (126), Expect = 1e-08
 Identities = 27/69 (39%), Positives = 39/69 (56%)
 Frame = +2

Query: 8   PDRKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRA 187
           P  KG  +  +K KA  KP K + +      +RR+L  ++ +   N+YR DL    +RRA
Sbjct: 8   PSGKGVVITTRKNKAANKPGKIMNKITISRDSRRTLKTIEGVCDKNYYRMDLKDPAMRRA 67

Query: 188 SAILRSQRP 214
            AILRSQ+P
Sbjct: 68  CAILRSQKP 76


>SB_25068| Best HMM Match : PI-PLC-X (HMM E-Value=0)
          Length = 219

 Score = 31.5 bits (68), Expect = 0.14
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 265 LQIIRLGCGCLSLFCFDGPLG 203
           ++ +R+GC CL L C+DGP G
Sbjct: 90  VRCLRMGCRCLELDCWDGPDG 110


>SB_46512| Best HMM Match : TIL (HMM E-Value=1.3)
          Length = 382

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +2

Query: 35  YKKAKATRKPAK---NLIRRPFK-AGARRSLYKVK-RLLKANHYRTDLCKATLRRASA 193
           YK AKA  KPAK    L +  +K A A+  L K K +L KA H    L KA  + A A
Sbjct: 278 YKLAKAKYKPAKAKYKLAKAKYKLAKAKYKLAKAKHKLAKAKH---KLAKAKYKLAKA 332


>SB_45094| Best HMM Match : DUF1090 (HMM E-Value=1.6)
          Length = 169

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +2

Query: 35  YKKAKATRKPAK---NLIRRPFK-AGARRSLYKVK-RLLKANHYRTDLCKATLRRASA 193
           YK AKA  KPAK    L +  +K A A+  L K K +L KA H    L KA  + A A
Sbjct: 65  YKLAKAKYKPAKAKYKLAKAKYKLAKAKYKLAKAKHKLAKAKH---KLAKAKYKLAKA 119


>SB_184| Best HMM Match : PAN (HMM E-Value=4.1e-09)
          Length = 720

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 52  YQKAR*KLNPPSIQGWCQEVTV 117
           YQK    LNP S  GWC+ V V
Sbjct: 451 YQKDPCVLNPCSSHGWCEAVNV 472


>SB_56125| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 235

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +1

Query: 133 VKG*PLPHR----PMQGYPSSCFSHPPLPEAHQSKKG 231
           V+G P P +    P QGYP+    +PP  + +Q+  G
Sbjct: 38  VQGYPPPQQGYPPPQQGYPAQQQGYPPAQQGYQTTGG 74


>SB_41690| Best HMM Match : DSL (HMM E-Value=0)
          Length = 2798

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 144  TTTAQTYARLPFVVLQPSSAP 206
            TTT  +Y+++P  V+ PS++P
Sbjct: 2413 TTTYSSYSKIPSTVILPSASP 2433


>SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
          Length = 943

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 138  RLTTTAQTYARLPFVVLQPSSAPRGPSKQKRLRQPQPSRIICKR 269
            + T  A  Y   P     P +AP  P+ +K + QP+P  +  K+
Sbjct: 873  KTTLHANLYIPKP-TTTPPPTAPPEPATKKHVSQPKPKHVAKKK 915


>SB_10156| Best HMM Match : DSL (HMM E-Value=3.3e-35)
          Length = 681

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 144 TTTAQTYARLPFVVLQPSSAP 206
           TTT  +Y+++P  V+ PS++P
Sbjct: 404 TTTYSSYSKIPSTVILPSASP 424


>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 931

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 154 HRPMQGYPSSCFSHPPLPEAH 216
           H P+ G P++  S PP+P  H
Sbjct: 242 HPPISGPPTTSMSGPPIPVHH 262


>SB_38679| Best HMM Match : Herpes_BLRF2 (HMM E-Value=2.6)
          Length = 147

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 174 PFVVLQPSSAPRGPSKQKRLRQPQPS 251
           P VV +P  +P+ P+K K     +PS
Sbjct: 56  PLVVDEPKPSPKSPTKSKSQTDSRPS 81


>SB_37763| Best HMM Match : rve (HMM E-Value=4.2e-27)
          Length = 510

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +1

Query: 13  QEGIHSSVQESKGYQKAR*KLNPPSIQGWCQEVTV---QSEEVVKG 141
           Q+ +HSS + ++   K   K NPPS     ++V V   Q++++VKG
Sbjct: 398 QKALHSSNESARRMVKRELKRNPPSRYFVGEKVLVRLPQTKKLVKG 443


>SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18)
          Length = 521

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 155 CGSG*PLTTSSLCTVTSWH 99
           C S  P+ T S C+V +WH
Sbjct: 206 CCSAFPIRTPSTCSVCTWH 224


>SB_28225| Best HMM Match : YL1 (HMM E-Value=2.1)
          Length = 331

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +1

Query: 13  QEGIHSSVQESKGYQKAR*KLNPPSIQGWCQEVTV---QSEEVVKG 141
           Q+ +HSS + ++   K   K NPPS     ++V V   Q++++VKG
Sbjct: 58  QKALHSSNESARRMVKRELKRNPPSRYFVGEKVLVRLPQTKKLVKG 103


>SB_25066| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1167

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +1

Query: 13  QEGIHSSVQESKGYQKAR*KLNPPSIQGWCQEVTV---QSEEVVKG 141
           Q+ +HSS + ++   K   K NPPS     ++V V   Q++++VKG
Sbjct: 661 QKALHSSNESARRMVKRELKRNPPSRYFVGEKVLVRLPQTKKLVKG 706


>SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 586

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +2

Query: 44  AKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 199
           AK TRK  +  + +P KAG    L++ K+     H   D+ K     ++AIL
Sbjct: 529 AKETRKCKRKALGKPLKAG----LFEDKKQGVGTHSMVDVLKDLQSLSAAIL 576


>SB_39148| Best HMM Match : OEP (HMM E-Value=0.33)
          Length = 208

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = +2

Query: 35  YKKAKATRKPAK---NLIRRPFK-AGARRSLYKVK-RLLKANH 148
           YK AKA  KPAK    L +  +K A A+  L K K +L KA +
Sbjct: 101 YKLAKAKYKPAKATYKLAKAKYKLANAKNKLAKAKYKLAKAKY 143


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,696,187
Number of Sequences: 59808
Number of extensions: 162106
Number of successful extensions: 463
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 387973711
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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