Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30003
(712 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 39 0.003
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 38 0.011
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 37 0.014
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 36 0.025
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 34 0.13
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 34 0.13
SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09) 34 0.13
SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_15403| Best HMM Match : CH (HMM E-Value=0) 31 0.70
SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07) 31 0.92
SB_54416| Best HMM Match : rve (HMM E-Value=1.4e-27) 30 2.1
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 3.7
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 28 6.5
SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004) 28 6.5
SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05) 28 8.6
SB_38061| Best HMM Match : DUF995 (HMM E-Value=4) 28 8.6
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 505
PC V C AG+ C + G A C C+ +CP D + VC + T+ + CE++R
Sbjct: 58 PCSNVFCHAGQEC-VAAKGKASCECLSECP---DHIKPVCGSDGVTYPNHCELHR 108
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGD---AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQD 511
PC C G VC GD C C CP D VC+ FN+ +++ CE+++
Sbjct: 116 PCRDTFCPRGGVCTPYVEGDRSYTTCECPTSCPDLDDP---VCSIFNQEFKNACEMHK-- 170
Query: 512 AYASTTLISAVVRN 553
YA +S ++N
Sbjct: 171 -YACKLQMSMAIKN 183
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 499
PCL V C CE DA C C + CP D VC ET+ + C +
Sbjct: 302 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRL 351
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 499
PCL V C CE DA C C + CP D VC ET+ + C +
Sbjct: 36 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRL 85
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 37.1 bits (82), Expect = 0.014
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQDAYA 520
PC CSA + G+A+C C+ CP D VC + + + + C++ RQ+A
Sbjct: 250 PCQTSPCSAPYAKCLVVQGEAVCTCL-SCPNMLDP---VCGSDGKNYDNVCKL-RQNACK 304
Query: 521 STTLISAVVRNTTTF 565
+ TLI+ + R+ F
Sbjct: 305 TNTLITLISRDACPF 319
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQDAYA 520
PC+ C+A ++ G A+C C+ CP + VC + + + ++CE+ +Q A
Sbjct: 181 PCMTKACTAPYSKCMSVRGKAVCMCM-SCP---KMNKPVCGSNGKDYNNECEL-QQFACK 235
Query: 521 STTLISAVVRN 553
+ T+I+ R+
Sbjct: 236 TNTMITVARRS 246
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
PCL V C CE DA C C + CP D VC ET+ + C
Sbjct: 79 PCLNVTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLC 126
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 341 PCLKVHCSAG-RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 508
PC CSA CE+ ++ +A+C C KDCP E D+ VC +T+ ++C + +Q
Sbjct: 1766 PCQNFICSAPYSSCEVKDN-EAVCECPKDCPKE-DAE--VCGTNWKTYTNECMMRKQ 1818
Score = 34.3 bits (75), Expect = 0.099
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 341 PCLKVHCS-AGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 505
PC + C G VC + C C CP S+R VC + T+ S CE++R
Sbjct: 2977 PCERYKCRYQGEVCVTDSRNVPRCVCPPGCPPAEVSQR-VCASDGLTYPSVCEMHR 3031
Score = 31.1 bits (67), Expect = 0.92
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 341 PCLKVHCSAGRV--CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQDA 514
PC +CS+ C+ + G A C C +DCP + + VC + N + ++C + + A
Sbjct: 1348 PCEGFNCSSPPYSSCQAKD-GKATCECSEDCP---KTLKPVCGSDNNDYDNEC-LMQARA 1402
Query: 515 YASTTLISA 541
A+ I+A
Sbjct: 1403 CATNKTITA 1411
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 341 PCLKVHC-SAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 505
PC++ C S GD+ CI CP ++ +C + N T+ S C + R
Sbjct: 1836 PCVRYDCGSTNPYSTCKPKGDSGFECI--CPTCPKAKDYLCASNNLTYMSKCHLER 1889
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQDAYA 520
PC V C C G A+C C +CP E VC T+ S C + + A
Sbjct: 779 PCKNVECKFKARCVGLPDGSAVCECNTECPSEASP---VCGQDGRTYSSTCAMDARACQA 835
Query: 521 STTL 532
T++
Sbjct: 836 QTSI 839
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
PCLK+ C C + G A C C DC + + VC T+ ++C
Sbjct: 228 PCLKISCKFHSRCVKSSGGSANCVCPSDCSH---TYSPVCGGDKTTYINNC 275
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQDAYA 520
PC ++ CS C + +G A C C + C + VC + + C + R
Sbjct: 709 PCSRISCSHYGRCVVRNNGKAHCVCPRQCQVRF---KPVCGTDGREYLNRCFLRRNACRT 765
Query: 521 STTL 532
T++
Sbjct: 766 QTSI 769
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
PC + C+ C+ DA C C + CP D R C + T+++DC
Sbjct: 151 PCENMQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDC 198
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQDAYA 520
PC V C C++ + G C C C YE VC +T+ + CE+ R A
Sbjct: 1271 PCDNVSCDYYAQCQVEDDGSTSCKCPIFCTYE---YMPVCGTDGKTYGNKCEM-RASACL 1326
Query: 521 STTLIS 538
+T+++
Sbjct: 1327 KSTMVT 1332
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQDAYA 520
PC C G+ C + +G A C C CP D VC + +T+ + C++ DA
Sbjct: 1573 PCEITLCDKGKRCLL-VNGTATCECFSACP---DIYDPVCASNGKTYSNRCDM-DADACI 1627
Query: 521 STTLISAV 544
T ++ V
Sbjct: 1628 RDTKLTVV 1635
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNC-IKDCPYETDSRRMVCTNFNETWQSDC 493
PC + C+ + + G+ MC C + +CP + VC + T+ ++C
Sbjct: 1865 PCGNIKCTHKQQQCVVRSGEPMCECVVNECPKNSSK---VCGSDGWTYDNEC 1913
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
PCL V C CE DA C C CP D VC +T+ + C
Sbjct: 191 PCLNVTCEYFAECEAFAADDAQCVCPSKCPAYID---QVCGTNGQTFDNLC 238
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 499
PC V C C G +C C+ CP + + VC + T++S+CE+
Sbjct: 1407 PCSTVTCLYHSKCFPQADGTGVCICLDQCPPD-NQNASVCGSDLVTYRSECEL 1458
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEV 499
PC C G CEI E G +C C C D VC + +T+ + C +
Sbjct: 1798 PCKSATCQFGGRCEIQEDGTEVCICPTYCRLNYDP---VCGSNRKTYLNFCSL 1847
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 344 CLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ--DAY 517
C + C +C + G C+C CP S + VC + +++ S+CE+ ++ +A
Sbjct: 1659 CGNIRCPRFSMCISAQEGGIKCSCPIYCP---PSGQPVCGSDGKSYGSECELRKEACEAK 1715
Query: 518 ASTTLIS 538
TL+S
Sbjct: 1716 IKLTLVS 1722
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
PC + C + C ++ A C C K CP S +C + +T+ + C
Sbjct: 1337 PCNRTQCPSYSRCVLDSSLQAKCVCTKSCPL---SYEPLCASNGKTFPNQC 1384
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 344 CLKVHCSAGRVCEINEHGDAMCNCIKDCP 430
C KV C C + +G A C+C CP
Sbjct: 1515 CSKVTCHRYAKCNNHYNGTASCSCSSRCP 1543
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYR 505
PC + C G C +G A C C +C T VC + +++ S C + R
Sbjct: 1729 PCDDLQCLHGSTCVRRVNGSASCQC-PEC--RTLKYTPVCGDDGKSYLSTCMLKR 1780
>SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09)
Length = 217
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVY 502
PC K C G +C + G C C CP ++ VC+ + + + CE++
Sbjct: 13 PCSKRVCMWGEMCRADSSGFTYCECPVSCP---NTYEPVCSVYGIQFPNKCELH 63
>SB_30470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 912
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
PC++V C VC+ DA C C +C + R C N T+ ++C
Sbjct: 276 PCIEVTCDFFAVCQAFGPKDARCICPHNCATYENQR---CGEDNVTYTNEC 323
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 341 PCLKVHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
PC KV C+ C G C C + CP S ++VC + + + ++C
Sbjct: 1538 PCSKVKCAFYGQCVWYYDGRTQCECRRTCP---RSDQLVCGSDDRDYANEC 1585
>SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07)
Length = 396
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 353 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC 493
+ C+ C+ DA C C + CP D R C + T+++DC
Sbjct: 1 MQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDC 44
>SB_54416| Best HMM Match : rve (HMM E-Value=1.4e-27)
Length = 1068
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Frame = +3
Query: 363 AQDVSAKSTNTETPCVT--ASRTVPTRQT----PDAWCAQTSTKPGNRIAKY-TARMLMP 521
+++++ +++++E C T + P+R+ A +T G+R + AR L
Sbjct: 918 SEEINRRNSDSEAFCRTDLQEKQEPSREAYVAVDSAMPDETKEMEGDRRPSFHRARSLSV 977
Query: 522 RQL*SVPWSA-IPPRSNRVLRNCREMPDCTESEMSDFPRRMRDWLFNIMRD 671
L P +P +SN ++ C E+E P + W+F + D
Sbjct: 978 SYLNETPSDMELPTQSNSASKSGESRASCMEAETMSLPAEINIWVFYVDTD 1028
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 380 EINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 508
+I EHGD +KDC E ++ ++ C N Q+ C + Q
Sbjct: 2540 DIKEHGDHHTLIVKDCRPE-ETGKLTCKARNSAGQAICSCFVQ 2581
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = -2
Query: 609 QCSQAFLGSSVILDLNVVVLRTTALIRVVEA*ASWRYTSQSDCQVSLKFVH 457
+C Q+ + ++ D+N +L + RVVE S R + C++ + +H
Sbjct: 1507 RCIQSLVHATHCRDINCTMLSCAKMKRVVEHTKSCRKKTSGGCRICQELIH 1557
>SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004)
Length = 445
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 306 KRMKTKKSTWKTLA*KSTAAQDVSAKST-----NTETPCVTASRTVPTRQTPDAWCAQTS 470
K +K KK K LA +S + A + + P TA +T PT TP A T+
Sbjct: 155 KPVKVKKEVNKALAMESAGFMNALATAAVAAPRKRKRPATTAQKT-PTATTPTTPTASTA 213
Query: 471 TKP 479
KP
Sbjct: 214 VKP 216
>SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 933
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +2
Query: 356 HCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDC-EVYRQDA--YAST 526
HC+ ++ E+ +C + +C +C N + ++ DC + Y+ A Y
Sbjct: 516 HCACRNGYQLKENSKYVCEDLNECNVANAGCEHICENTHGSFNCDCRQGYKLKAGGYGCE 575
Query: 527 TLISAVVRN 553
+ +V+N
Sbjct: 576 NINECLVKN 584
>SB_44491| Best HMM Match : Lipase_GDSL (HMM E-Value=4.5e-05)
Length = 720
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +3
Query: 351 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTARM 512
KS ST T +P T T P TP T+TK ++ A + +
Sbjct: 298 KSDQVTTTPKPSTTTTSPTKTTPTTTPPTTTPSTTTTSTTTKQTSKDASLESEL 351
>SB_38061| Best HMM Match : DUF995 (HMM E-Value=4)
Length = 220
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 171 SEQLGRGDISEAEHIEHGMSESLDEKRYMRQK*PELTTFSTRSLMKRMKTKK 326
S G +++E EH E SE D+K + K + + R L KR++ KK
Sbjct: 115 SSDSGNSEVTEQEHDEDANSEENDDKPTRKTKLDK----AQRKLNKRLRQKK 162
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,070,132
Number of Sequences: 59808
Number of extensions: 452165
Number of successful extensions: 1440
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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