Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00028
(846 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 124 1e-28
SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027) 39 0.006
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 36 0.031
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_33196| Best HMM Match : Toxin_9 (HMM E-Value=8.6) 33 0.22
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_12537| Best HMM Match : DSPc (HMM E-Value=1.3e-09) 32 0.51
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 32 0.51
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.67
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_35352| Best HMM Match : zf-C2H2 (HMM E-Value=0.0016) 29 3.6
SB_44566| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_9715| Best HMM Match : F5_F8_type_C (HMM E-Value=2.4e-22) 29 3.6
SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51) 29 3.6
SB_58528| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1) 29 4.7
SB_49765| Best HMM Match : EGF (HMM E-Value=0) 29 6.3
SB_11608| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 124 bits (298), Expect = 1e-28
Identities = 45/84 (53%), Positives = 63/84 (75%)
Frame = +1
Query: 511 LGCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPYEIPPCEHHVPGNRMPCSGDTKTPKC 690
+GC+GG P AW++WK GLV+GG Y+S +GC+PY+I C+HHV G PC GD+ TPKC
Sbjct: 152 MGCNGGYPESAWDHWKSKGLVTGGQYDSHKGCQPYKIAACDHHVVGKLKPCKGDSPTPKC 211
Query: 691 TKKCESGYDVNYKQDKQYGKHVYT 762
+KCE+GY+V+Y DK +G+ Y+
Sbjct: 212 ERKCEAGYNVSYSDDKHFGQSAYS 235
Score = 112 bits (269), Expect = 4e-25
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +2
Query: 272 LPIKTHNFDLIASLPENFDPRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSN 451
LP++ + +P++FD R++WP CPT+ EVRDQG+CGSCWAFGAVEAM+DR C +S
Sbjct: 72 LPLRKKLLISMDDVPDHFDSREQWPHCPTIKEVRDQGACGSCWAFGAVEAMSDRYCIHSE 131
Query: 452 GTKHFHFSAEDLLSCCPIC 508
G H SAEDLLSCC C
Sbjct: 132 GKVMPHISAEDLLSCCETC 150
Score = 36.3 bits (80), Expect = 0.031
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 771 DEDHIRAELFKNGPVEGAFTVYSD 842
D I+ E+ NGPVEGAFTVY+D
Sbjct: 239 DPAEIQKEIMTNGPVEGAFTVYAD 262
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 132 HPLSDEFINTINLKQNSWKAGRNFPRDTSFAHLKKIMG 245
+PLS E I+ IN +WKAG+NF + +K++ G
Sbjct: 28 NPLSMEAIDFINSLHTTWKAGKNFAEVYTIEDVKRLCG 65
>SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027)
Length = 295
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +2
Query: 281 KTHNFDLIASLPENFDPRDKWPD--CPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNG 454
+ H + +A LP +FD RD T CGSCWA G AM DR+ G
Sbjct: 41 RPHEYLNMAKLPTSFDWRDVNGTNYASTTRNQHIPQYCGSCWAHGTTSAMADRINILRKG 100
Query: 455 TKH 463
H
Sbjct: 101 KWH 103
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 36.3 bits (80), Expect = 0.031
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Frame = +2
Query: 326 DPRDKWPDCPTLNEVRDQGSCGSCWAF---GAVEA---MTDRVCTYSNGT 457
D D+ P +N + QG+CGSCWAF GAVEA + + C SN T
Sbjct: 133 DEEDE-PSDGAVNPAKGQGTCGSCWAFATAGAVEAAHFIQEGFCKTSNLT 181
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 329 PRDKWPDCPTLNEVRDQGSCGSCWAFGAVEAM 424
P W +N V+ QG CGSC+AF A+
Sbjct: 501 PHVDWRKAGAVNSVKSQGICGSCYAFAVAGAL 532
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +2
Query: 341 WPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSC 496
W + V++QG CGSCWAF A+ + + K S ++L+ C
Sbjct: 121 WRSKGYVTPVKNQGQCGSCWAFSTTGALEGQ--HFRKTGKLVSLSEQNLVDC 170
>SB_33196| Best HMM Match : Toxin_9 (HMM E-Value=8.6)
Length = 265
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 688 CTKKCESGYDVNYKQDKQYGKHVYTCPETKTTSARNCSRMVPSKVLSQYIQIC 846
C KC+SGYD Y++ ++ HV C T T+S NC S ++ ++ C
Sbjct: 13 CLAKCQSGYDTLYRE--KFWLHVIPCNTTLTSS--NCEGDYVSGRFARRLENC 61
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 368 VRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSC 496
V++QG CGSCWAF ++ + + K S ++L+ C
Sbjct: 348 VKNQGQCGSCWAFSTTGSLEGQ--NFKKTGKLVSLSEQNLVDC 388
>SB_12537| Best HMM Match : DSPc (HMM E-Value=1.3e-09)
Length = 195
Score = 32.3 bits (70), Expect = 0.51
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 719 LITNKTNNTENMYILVRRRRPHPRGIVQEWSRRRCFH 829
L+ N N E ++ ++ +RPH R Q+WS + FH
Sbjct: 150 LMKNMALNPEEAHLFIKSKRPHIRLASQQWSAVQQFH 186
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +2
Query: 341 WPDCPTLNEVRDQGSCGSCWAF---GAVE 418
W + V++QG CGSCWAF G+VE
Sbjct: 49 WSQKGYVTGVKNQGQCGSCWAFSTTGSVE 77
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 341 WPDCPTLNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHF-HFSAEDLLSC 496
W + V+DQ CGSCW+FG + T TK+ S ++L+ C
Sbjct: 646 WVIRGAVTPVKDQAVCGSCWSFGTTGTIEG---TLFLKTKYLTRLSQQNLMDC 695
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 359 LNEVRDQGSCGSCWAFGAVEAMTDRVCTYSNGTKHFHFSAEDLLSC 496
++ VR QG CGSC+A AV A+ + K SA+ ++ C
Sbjct: 324 VSPVRGQGICGSCYALAAVGAVEGAYFMKTGKLK--ELSAQQVIDC 367
>SB_35352| Best HMM Match : zf-C2H2 (HMM E-Value=0.0016)
Length = 221
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +1
Query: 565 GLVSGGSYNSSQGCRPYEIPPCEHHVPGNRMPCSGDTKTPKCTKKCESGYDVNYKQDKQY 744
G+ + ++S P +P H N +GD K +C KC+ + + + + +
Sbjct: 144 GVEAKPKHDSPMDGNPSPLPQGAHPADSNSTDGAGDLKILRC-NKCDKIFSSSSELVRHF 202
Query: 745 GKH--VYTCPETKTTSAR 792
H VY C + T AR
Sbjct: 203 HHHMDVYQCTKCDKTFAR 220
>SB_44566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = +2
Query: 416 EAMTDRVCT--YSNGTKHFHFSAEDLLSCCPICDWDAAEECR----D*LGNIGSTSV*YQ 577
E+ ++C Y+ K S E + C P+ +W A E+ R D LG++ S V
Sbjct: 115 ESYNAKICNFNYAQAVKESDSSGEPISHCEPLYEWMAPEQLRGKPADKLGDVYSFGVMVW 174
Query: 578 EVVT 589
E VT
Sbjct: 175 ECVT 178
>SB_9715| Best HMM Match : F5_F8_type_C (HMM E-Value=2.4e-22)
Length = 431
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 659 PVAVTRRLQNAQKNANLDTTLITNKTNNTENM 754
PVA TRR++ A N D T+IT+ T M
Sbjct: 286 PVASTRRIKEAYANEAYDMTIITHSHTTTVTM 317
>SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51)
Length = 604
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 715 DVNYKQDKQYGKHVYTCPETKTTSARNCSRMVPSK 819
DV+ K+ K H P+T+TT A+N + V +K
Sbjct: 541 DVHNKKTKNAANHNLVLPKTRTTLAKNSFKFVAAK 575
>SB_58528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = +2
Query: 281 KTHNFDLIASLPEN----FDPRDKW-PDCPTLN-EVRD 376
+ HN D+IAS+P N F+PR+ W P C L EV D
Sbjct: 328 RKHNDDVIASIPTNQLLVFNPREGWVPLCAFLEVEVPD 365
>SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1)
Length = 1139
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 581 VVTIPVKVADLTRS-LRVNITYPATGCPVAVTRRLQNAQKNANLDTTLITNKTNNTENMY 757
+ T P+ +T + + IT C + L + ++ A + TT+ ++ N N
Sbjct: 213 ITTTPITTTPITTTPITTTITNHRLNCHTSSVI-LSSRKRPAPITTTITNHRLNCQTNSV 271
Query: 758 ILVRRRRPHP 787
IL R+RP P
Sbjct: 272 ILSSRKRPAP 281
>SB_49765| Best HMM Match : EGF (HMM E-Value=0)
Length = 508
Score = 28.7 bits (61), Expect = 6.3
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 574 SGGSYNSSQGCRPYEIPPCEHHVPGNRMPCSGDTKTPK-C-TKKCESGYDVNYKQDKQYG 747
+GG N++Q + Y C G C DT PK C + C +G N QD G
Sbjct: 169 NGGVCNNTQDGKNYTCT-CSPGYTGRH--C--DTVIPKPCDSSPCNNGSVCNNTQD---G 220
Query: 748 KHVYTCPETKTTSARNCSRMVPSKVLS 828
K+ YTC + + R+C ++P +S
Sbjct: 221 KN-YTCTCSPGYTGRHCDTVIPKACVS 246
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 670 DTKTPKCTKK-CESGYDVNYKQDKQYGKHVYTCPETKTTSARNCSRMVPSK 819
DT T C C +G N QD GK+ YTC + + R+C ++P K
Sbjct: 114 DTVTRPCVSSPCSNGSVCNNTQD---GKN-YTCTCSPGYTGRHCDTVIPLK 160
>SB_11608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 854
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +1
Query: 511 LGCSGGMPRLAWEYWKHFGLVSGGSYNSSQGCRPYEIPPCEHHVPGNRMPCSGDTKTPKC 690
+GCS EY + +GG+ N C+ H N +PC+ + T K
Sbjct: 288 IGCSLKPKYCVIEYNGNRTCFAGGTLNPGNPCQQCNSNDKFHWTNNNHLPCNDNNSTTK- 346
Query: 691 TKKCESG 711
C++G
Sbjct: 347 NDYCDNG 353
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,991,836
Number of Sequences: 59808
Number of extensions: 613445
Number of successful extensions: 1788
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1788
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2395401800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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