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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00001
         (615 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.)             116   2e-26
SB_34970| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.015
SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0)                36   0.026
SB_54174| Best HMM Match : EGF (HMM E-Value=0.21)                      32   0.42 
SB_48206| Best HMM Match : LTXXQ (HMM E-Value=3)                       30   1.3  
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16)                  30   1.7  
SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)                30   1.7  
SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.0  
SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3)                 29   3.0  
SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3)                29   3.0  
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 29   3.0  
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)                 29   4.0  
SB_20721| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.0  
SB_36343| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.2  
SB_12036| Best HMM Match : G_glu_transpept (HMM E-Value=0)             28   5.2  
SB_54815| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.9  
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.9  
SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.1  
SB_33909| Best HMM Match : FH2 (HMM E-Value=0)                         27   9.1  
SB_23580| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.1  
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.1  
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.1  
SB_34234| Best HMM Match : Galactosyl_T (HMM E-Value=0.0098)           27   9.1  
SB_24292| Best HMM Match : LTXXQ (HMM E-Value=1.7)                     27   9.1  

>SB_55653| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 390

 Score =  116 bits (278), Expect = 2e-26
 Identities = 59/75 (78%), Positives = 66/75 (88%), Gaps = 1/75 (1%)
 Frame = +2

Query: 356 LNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGN-L*WQGTIDT 532
           LNLEPDNVGVVVFGND+LIKEGDIVKRTGAIVDVPVGE++LGRVVDALGN +  +G    
Sbjct: 3   LNLEPDNVGVVVFGNDRLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNPIDGKGPTG- 61

Query: 533 KSRMRVGIKAPGIIP 577
            +R RVG+KAPGIIP
Sbjct: 62  GTRARVGVKAPGIIP 76


>SB_34970| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 866

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = -1

Query: 327 PPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSRMV 196
           PPSP  G +S+H+ S T+ N+   ++ S S L  AP  +S+ +V
Sbjct: 197 PPSPTHGVASTHSASPTVPNSSPLSLFSTSPLTDAPHHVSNPLV 240


>SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0)
          Length = 448

 Score = 35.9 bits (79), Expect = 0.026
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +2

Query: 383 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGN-L*WQGTIDTKSRMRVGIK 559
           + + G + LI+ G     TG  + +PVG + LGR+++ +G  +  +G ++T  R  +  +
Sbjct: 124 IAMDGTEGLIR-GQKCVDTGGPITIPVGPETLGRIINVIGEPIDERGPVETDKRAAIHAE 182

Query: 560 APGII 574
           AP  +
Sbjct: 183 APEFV 187


>SB_54174| Best HMM Match : EGF (HMM E-Value=0.21)
          Length = 658

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -2

Query: 551 RPSYGISCRLSLAIIGFPKRLLHAQGSALR 462
           R  YG  CR S   IG P R  H QG AL+
Sbjct: 87  RSVYGDYCRTSSPFIGLPPRSPHGQGDALK 116


>SB_48206| Best HMM Match : LTXXQ (HMM E-Value=3)
          Length = 513

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
           RRTPPS  P  S S   SDT    +  +V  R A  A  R+ S +
Sbjct: 261 RRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSAQGRLTSKK 305


>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 799

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
           RRTPPS  P  S S   SDT    +  +V  R A  A  RI + +
Sbjct: 521 RRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSAQGRITTKK 565


>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1880

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = -3

Query: 457 NVYDSTSTLDNISFFDKLVITKYYHTHIVRFQVKAIPLRPEENSTISSAW 308
           ++  S  +L+N+ F  K+   + +  +I R+Q++ +  RP+  +  S AW
Sbjct: 38  HIESSKPSLENLDFEGKVRKLQEHFKNIPRYQIRKVLGRPDVRNNASLAW 87


>SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 308

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -1

Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
           R TPPS  P  S S   SDT  N +  +V  R A  A  R+ +++
Sbjct: 115 RHTPPSFTPRSSISRRRSDTPKNRRRISVPRRRAGSALGRLTTNK 159


>SB_58527| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1659

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 475  DLLSDGNVYDSTSTLDNISFFDKLVITKYYHTHIVRF 365
            D LSDG+    ++T  N  F D+++   + HT+I RF
Sbjct: 1175 DALSDGS---KSNTSGNYGFMDQIMALSWIHTNIARF 1208


>SB_11657| Best HMM Match : bZIP_2 (HMM E-Value=3e-16)
          Length = 298

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 330 TPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSRM 199
           TPPSP P  + S  T      + D+ + S S+ G++ +  S  M
Sbjct: 4   TPPSPSPSSTGSSLTDTESNESNDSGIDSVSSTGSSNKFPSDYM 47


>SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
          Length = 493

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
           RRTPPS  P  S S   SDT    +  +V  R A  A  RI + +
Sbjct: 233 RRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSAQGRITTKK 277


>SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 267

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -1

Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
           RRTPPS  P  S S   SDT    +  +V  R A  A  R+ + +
Sbjct: 90  RRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSAQGRLTTKK 134


>SB_13658| Best HMM Match : MbeD_MobD (HMM E-Value=2.3)
          Length = 529

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -1

Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
           RRTPPS  P  S S   SDT    +  +V  R A  A  R+ + +
Sbjct: 341 RRTPPSFTPRSSISRRRSDTPKKRRRISVPRRRAGSALGRLTTKK 385


>SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3)
          Length = 660

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -1

Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
           RRTPPS  P  S S   SDT    +  +V  R A  A  R+ + +
Sbjct: 472 RRTPPSFTPRSSISRRRSDTPIKQRRISVPRRRAGSALGRLTTKK 516


>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 1507

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 132 PQWPWHLENYMSQPPTKLPRSPPS-SKRGSLEPRP 233
           PQ P H E      PTK P+SP + S   SL P P
Sbjct: 117 PQSPLHPEKSPLLSPTKAPKSPSTQSTLASLAPNP 151


>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1207

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 327 PPSPQPGCSSSHNTSDTITNAQDTTVSSRS 238
           PP+P    ++S NTS TI++   T  SSR+
Sbjct: 849 PPAPTSSLATSGNTSTTISDNTATPTSSRT 878


>SB_20721| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 310

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 23/55 (41%), Positives = 25/55 (45%)
 Frame = -1

Query: 348 P*GLRRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSRMVEISA 184
           P  LRRTPPS  P  S S   SDT T  +      RS      R+L SR    SA
Sbjct: 120 PGQLRRTPPSFTPRLSISRRRSDTPTKRRRMHREYRS----GERVLLSRRRPTSA 170


>SB_36343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 393

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 189 RSPPSSKRGSLEPRPRLI*KRLSCLEHW*WYR 284
           ++PP+S    ++P P LI   + C E+W  YR
Sbjct: 4   KNPPTSPPVEVKPTPILIDDNVKCPEYWINYR 35


>SB_12036| Best HMM Match : G_glu_transpept (HMM E-Value=0)
          Length = 646

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 350 NGLNLEPDN-VGVVVFGNDKLIKEGDIVKR 436
           N LN+   N +G +   N K++ EGDIVKR
Sbjct: 247 NALNITNSNSLGEIFTRNGKMLVEGDIVKR 276


>SB_54815| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 285

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = -3

Query: 565 WRLNTDPHTG-FRVDCPLPS*VSQSVYYTPK 476
           W+L  DP T  FR D  LP+ V+Q V+Y+PK
Sbjct: 204 WKLLRDPITPVFRSD--LPTLVTQLVHYSPK 232


>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 302

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -1

Query: 336 RRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
           RRTP S  P  S S   SDT    +  +VS R A  A  R+ + +
Sbjct: 115 RRTPSSFTPRSSISRRRSDTPKKRRRISVSRRRAGSALGRLTTKK 159


>SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 664

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 19/66 (28%), Positives = 30/66 (45%)
 Frame = +3

Query: 183 LPRSPPSSKRGSLEPRPRLI*KRLSCLEHW*WYRSCYGLKNIQAEEMVEFSSGLKGMALT 362
           LPRSP  S        P+L  KR+  L+   ++ S +G         VE +  L+ + + 
Sbjct: 308 LPRSPKGSPVSKGGNSPKLNRKRMKVLQEAMYHSSEHG--------FVEIAMELRSLGVP 359

Query: 363 WNLTMW 380
           W+L  W
Sbjct: 360 WSLHCW 365


>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
          Length = 1063

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 342 GLRRTPPSPQPGCS 301
           GL   PPSPQPGC+
Sbjct: 724 GLPPPPPSPQPGCA 737


>SB_23580| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 161

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 342 GLRRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSS 205
           G RR     +P   ++  +S     A D T+S RSA    PR LSS
Sbjct: 11  GRRRVVDDSKPLFQTAVESSTVPKTATDVTLSPRSARDMRPRPLSS 56


>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 797

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = -1

Query: 366 SKLRPFP*GLRRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAP 220
           +K +P P G  +    P P  S  HN +       D    S+S+    P
Sbjct: 100 NKNKPQPSGFSQEQSRPSPFASQEHNQTSPFARTMDDNAPSKSSPFVGP 148


>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2749

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -1

Query: 342  GLRRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSS 205
            G RR     +P   ++  +S     A D T+S RSA    PR LSS
Sbjct: 2383 GRRRVVDDSKPLFQTAVESSTVPKTATDVTLSPRSARDMRPRPLSS 2428


>SB_34234| Best HMM Match : Galactosyl_T (HMM E-Value=0.0098)
          Length = 1028

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +2

Query: 380 GVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDAL 499
           G+++FG D +    +IVKR   +   P G+Q +G  ++AL
Sbjct: 207 GLIIFGRDFV---DEIVKRNQTLQCHPFGDQAIGLWINAL 243



 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +2

Query: 380 GVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDAL 499
           G+++FG D +    +IVKR   +   P G+Q +G  ++AL
Sbjct: 488 GLIIFGRDFV---DEIVKRNQTLQCHPFGDQAIGLWINAL 524


>SB_24292| Best HMM Match : LTXXQ (HMM E-Value=1.7)
          Length = 288

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 339 LRRTPPSPQPGCSSSHNTSDTITNAQDTTVSSRSALGAAPRILSSR 202
           L+RTPPS  P  S S   SDT    +  +V  R A G+A   ++++
Sbjct: 121 LQRTPPSFTPRSSISRRRSDTPKGRRRISVPRRRA-GSAQGCITNK 165


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,751,083
Number of Sequences: 59808
Number of extensions: 421132
Number of successful extensions: 1335
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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