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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a11r
         (726 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)                  37   0.014
SB_2237| Best HMM Match : Vicilin_N (HMM E-Value=2.5)                  35   0.058
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.13 
SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.)               34   0.13 
SB_67| Best HMM Match : Ribosomal_S13_N (HMM E-Value=5.2)              33   0.18 
SB_10204| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.31 
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)                  32   0.41 
SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.54 
SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0)                 32   0.54 
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)                 31   0.72 
SB_40942| Best HMM Match : 7tm_1 (HMM E-Value=1.4013e-45)              31   0.95 
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)                    31   0.95 
SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.3  
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.3  
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_32678| Best HMM Match : HEAT (HMM E-Value=9.6e-18)                  30   1.7  
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)                   30   1.7  
SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.7  
SB_51014| Best HMM Match : DUF963 (HMM E-Value=4.7e-07)                30   2.2  
SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.2  
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)    30   2.2  
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.2  
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)                     29   3.8  
SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4)                      29   3.8  
SB_44100| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.1  
SB_41617| Best HMM Match : RVT_1 (HMM E-Value=0)                       29   5.1  
SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9)              28   6.7  
SB_43321| Best HMM Match : Laminin_A (HMM E-Value=0.76)                28   6.7  
SB_29860| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  
SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)            28   6.7  
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)           28   6.7  
SB_57555| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.9  
SB_47440| Best HMM Match : SURF6 (HMM E-Value=0.96)                    28   8.9  
SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07)                   28   8.9  

>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
          Length = 2072

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
 Frame = -1

Query: 639  NQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSK-KFQ 463
            N+ TE     S + E  KM+NS + +  +L S      +E  TK K   S+K + K ++ 
Sbjct: 1020 NERTELEK--SFRQERTKMKNSHDKEMVQLESREDQLTKEMDTKLKKLTSEKNSIKAEYV 1077

Query: 462  SKRTKLNTETEEWNDSSHLLWQN 394
            SK  +L +E EE N  S L  +N
Sbjct: 1078 SKIARLQSELEESNQRSRLDIEN 1100


>SB_2237| Best HMM Match : Vicilin_N (HMM E-Value=2.5)
          Length = 127

 Score = 35.1 bits (77), Expect = 0.058
 Identities = 23/99 (23%), Positives = 44/99 (44%)
 Frame = -1

Query: 618 NYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNT 439
           NY S++ E++  R  +  ++ K P      ++   T++    ++KE   K    RT   T
Sbjct: 25  NYGSNRKEEIPKRTMAPTERRKYPKELWLQQKGGNTQNNYGSNRKEEIPK----RTMAPT 80

Query: 438 ETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQ 322
           E  ++     L  +  N+ K + +   EE+P T  V  +
Sbjct: 81  ERRKYPKELWLQQKGGNTQKNYGSNRKEEIPKTTIVPTE 119


>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2208

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
 Frame = -1

Query: 609  SHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETE 430
            +H+  + K+   +        +  +   R++  +  ++  K + SKK QSK  +L TE  
Sbjct: 1062 THEAANSKLSEDNERLTNNAAAKAQNIERDAIIQQLMD-EKSQMSKKLQSKEDELATEKA 1120

Query: 429  EWNDSSHLLWQNRNSNKR-HANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTM 256
                 +  L   R   K  H N+   E   T       A    S +   H +  N+Q +
Sbjct: 1121 NSQKHTETLSSQRAKEKELHTNIKELEAKITTLTEESQAKLKASSY-EKHQLVKNIQLL 1178


>SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 322

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 24/101 (23%), Positives = 46/101 (45%)
 Frame = -1

Query: 492 SKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMAS 313
           S +E   + +S+   LN    E NDS + + + +   K   NL+ E         N    
Sbjct: 159 SSEEEDGEIESEDNSLNNSHSE-NDSKNRVSEKKYEEKTGENLVTETYQEQKSYQNSDYE 217

Query: 312 QYQSEFLNSHLVTSNVQTMGHNVDRTLASFSGTSRANFNLS 190
           + +S+   +   +S + +   N D +  +F+G+SR  ++LS
Sbjct: 218 RQKSDRERTEAESSQITS--RNTDESKETFAGSSRLPYDLS 256


>SB_67| Best HMM Match : Ribosomal_S13_N (HMM E-Value=5.2)
          Length = 243

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
 Frame = -1

Query: 582 RNSSNYQQEKLPS-NYKTSRRESATKHKL-----ECSKKETSKKFQSKRT-KLNTET-EE 427
           R       E++P  N  + RR+     K      + S KE ++K   +R  +L  E   +
Sbjct: 122 RRKGELMPERMPDWNKMSDRRKGELMPKRMPDWNKMSDKEIAEKMSDRRKGELMPERMPD 181

Query: 426 WNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSE 298
           WN  S      R  ++R   LMPE +P  N +S++   +   E
Sbjct: 182 WNKMSDRRKDERQRDRRKGELMPERMPDWNKMSDRRKGELMPE 224



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 2/117 (1%)
 Frame = -1

Query: 582 RNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTK--LNTETEEWNDSSH 409
           R       E++P   K S R    K +L   +     K   +R    +     +WN  S 
Sbjct: 103 RRKGELMPERMPDWNKMSDRR---KGELMPERMPDWNKMSDRRKGELMPKRMPDWNKMSD 159

Query: 408 LLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMGHNVDR 238
                + S++R   LMPE +P  N +S++   + Q +     L+   +       DR
Sbjct: 160 KEIAEKMSDRRKGELMPERMPDWNKMSDRRKDERQRDRRKGELMPERMPDWNKMSDR 216



 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = -1

Query: 459 KRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSE 298
           K+  +     +WN  S      + S++R   LMPE +P  N +S++   +   E
Sbjct: 20  KKALMPEHMPDWNKMSDKEIVEKMSDRRKGELMPERMPDWNKMSDRRKGELMPE 73


>SB_10204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 415

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
 Frame = -1

Query: 708 QNSGNLMTGNY---ASGPFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNY 538
           +N  N  T NY   A+  +    I+    T   NY++   E+   + + NY   K   NY
Sbjct: 129 ENYSNKATENYSNKATENYSTKAIENYSTTAIENYSTKATENYSTKATENY-STKATENY 187

Query: 537 KTSRRESATKHKLECSKKETSKKFQSKRTK-LNTE-TEEWNDSSHLLWQNRN-SNKRHAN 367
            T   E+ +    E    + ++ + +K T+  +T+ TE ++  +   +   N S K   N
Sbjct: 188 STKATENYSTKAAENYSTKATENYSTKATENYSTKATENYSTKATENYTTENYSTKATEN 247

Query: 366 LMPEELPFTNYVSNQMASQYQSEFLNSH--LVTSNVQTMGHNVDRTLASFSGTSRANFNL 193
              + +   NY S +    Y ++ + ++    T N  T         A+ + +++A  N 
Sbjct: 248 YSTKAI--ENY-STKATENYSTKAIKNYSTKATKNYSTKATENYSNKATKNYSTKATENY 304

Query: 192 ST 187
           ST
Sbjct: 305 ST 306


>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
          Length = 462

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
 Frame = -1

Query: 597 EDLKMRNSSNYQQEKLPS------NYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTE 436
           E+ K RN+   Q++KLP       + K +R E+  + + + + +E   +   K+ +    
Sbjct: 73  EEGKNRNTRRRQEQKLPEEGKNKKHQKRARTETTRRGQEQKTPEEGKNRNHQKKARTENT 132

Query: 435 TEEWNDSSHLLWQNRNSNKRHANLMPEE 352
                +      +NRN+ KR     PEE
Sbjct: 133 RRRQGEKPPEEGKNRNTRKRQEQKTPEE 160


>SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 808

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
 Frame = -1

Query: 588 KMRNSSNYQQEKLPSNYKTSRRESATK--HKLECSKKETSKKFQSKRTKLNTETEEWNDS 415
           K  N    + +K+  NY+   +ES  K   +L+ +K    K FQS   + +  ++   D 
Sbjct: 537 KSVNGLEKEIKKMEQNYELKSKESDEKFHRELQNTKDRLQKDFQSFHQRTSENSQSMQDR 596

Query: 414 SHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTS 271
              L + RNS +   + +  EL  +   +++     +++     LV S
Sbjct: 597 ILKLEEERNSLEVEVSRLRSELVSSKLKADEDLMNAKTKLKQEELVRS 644


>SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0)
          Length = 2376

 Score = 31.9 bits (69), Expect = 0.54
 Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 9/149 (6%)
 Frame = -1

Query: 651  FIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSR---RESATKHKLECSKKE 481
            F+    PT  HN   ++Y  +  +  SN     L       R     S +++   CSK +
Sbjct: 1921 FVPSADPTSIHNLWRYRYHTICTKRQSNQYSRPLAGECDIVRLVDLSSCSEYVSHCSKHQ 1980

Query: 480  TSKKFQSKR-TKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVS--NQMASQ 310
               +   ++ T L+  T   + S   + Q+R+    H +  P++   T   S    M   
Sbjct: 1981 PIGESDPRQATPLHAPTPRLDMSRSGIGQSRSEMGLHTSKQPQKQTKTRTKSAVKFMGET 2040

Query: 309  YQSEFLNSHLVT---SNVQTMGHNVDRTL 232
            +++  +   ++T   ++V   G +VD+ L
Sbjct: 2041 HKAPVIKGSVITPGRAHVTHTGSDVDQGL 2069


>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
          Length = 1555

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 21/91 (23%), Positives = 43/91 (47%)
 Frame = -1

Query: 639  NQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQS 460
            ++P++ ++  +  YE  +   S  Y++  +      +R+    +HK    K+  +K   S
Sbjct: 1378 DEPSDGYHGDNKDYEGWRSPRSG-YRRSGISGESHENRKNKKKEHK----KRMHAKIKHS 1432

Query: 459  KRTKLNTETEEWNDSSHLLWQNRNSNKRHAN 367
            KR     +  +W D + L + N+N+N  H N
Sbjct: 1433 KRMFEVPDQLDWRDYALLRYVNKNNNDTHYN 1463


>SB_40942| Best HMM Match : 7tm_1 (HMM E-Value=1.4013e-45)
          Length = 358

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 21/77 (27%), Positives = 35/77 (45%)
 Frame = -1

Query: 516 ATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTN 337
           A KH L C+   T +       +++ E      S+ +    RNS ++  +    EL   +
Sbjct: 285 AFKHILCCNLVATGRAMDQFIARVSGEASNGVSSNEMALAMRNSGQQQIS----ELRCAS 340

Query: 336 YVSNQMASQYQSEFLNS 286
           Y+SNQM S  Q +  N+
Sbjct: 341 YMSNQMTSDKQCKLTNA 357


>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
          Length = 847

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = -1

Query: 561 QEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLL 403
           QEKL    K S +      KLE   KE   K    +++L     E   ++HLL
Sbjct: 736 QEKLEGVSKASEQSKTHAQKLESLNKEQENKLVDAQSRLEESEAEGRKTAHLL 788


>SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 320

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 33/149 (22%), Positives = 61/149 (40%)
 Frame = -1

Query: 633 PTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKR 454
           P+E   Y++   E+   + + NY   K   NY T   E+ +    E    + ++K+ +K 
Sbjct: 8   PSEYITYSTKATENYSTKATENY-STKASENYSTKATENYSTKASENYSTKATEKYSTKA 66

Query: 453 TKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVT 274
            + N  T+   + S    +N  S K   N   +    T   S +    Y ++  + +  T
Sbjct: 67  AE-NYSTKATENYSTKATEN-YSTKAAENYSTKA---TENYSTKATENYSTK-ASENYTT 120

Query: 273 SNVQTMGHNVDRTLASFSGTSRANFNLST 187
            N  T       T A+ + +++A  N ST
Sbjct: 121 ENYSTKAAEKYSTKATENYSTKATENYST 149


>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 932

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
 Frame = -1

Query: 525 RESATKHKLECSKKETSKKFQSKRTKLNTET--EEWNDSSHLLWQNRNSNKRHANLMPEE 352
           ++  T  K + +K E+  +   K     T+   E+  DS  L+  +  + K+ ANL  EE
Sbjct: 264 KKQLTDVKNQLAKSESQLQAAEKDLAFKTQELKEKVQDSEELIKASNENIKKAANLS-EE 322

Query: 351 LPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMGHNVDRTL 232
           L  T  + +Q+ +Q +S       +   +    HN D  +
Sbjct: 323 LMKTKSLLDQVKAQLESSEAKCKQLGKEMDCQKHNFDSVI 362


>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1560

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 20/64 (31%), Positives = 33/64 (51%)
 Frame = -1

Query: 549 PSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHA 370
           P+    S  ++  K   +  KKE   K Q K+T LNT  E+  DS  L   +R+S+ + +
Sbjct: 722 PATPSLSVLKAGMKVTFDDKKKEDDSKKQ-KKTDLNTVLEDDEDSVSLSSSHRSSSSQSS 780

Query: 369 NLMP 358
           + +P
Sbjct: 781 SPVP 784


>SB_32678| Best HMM Match : HEAT (HMM E-Value=9.6e-18)
          Length = 844

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -1

Query: 621 HNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETS-KKFQSKRTKL 445
           H++    Y +LK+R SS+Y  + L     T  +      +L   K ++S +KF S     
Sbjct: 543 HDFDYDDYHELKLRRSSSYDDDLLLDGMVTPHQIGVLLRRLHGCKDDSSVRKFVSDIIIK 602

Query: 444 NTETEEW 424
              +++W
Sbjct: 603 FAHSQQW 609


>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
          Length = 144

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 28/128 (21%), Positives = 55/128 (42%)
 Frame = -1

Query: 579 NSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLW 400
           NS N   + L S+   S   ++     + S  +  K   S   KLN+   + N+S+    
Sbjct: 19  NSDNLNSDNLNSDKLKSDNSNSDNSNSDNSNSDKLKSDNSNSEKLNSNNSDSNNSNSDNS 78

Query: 399 QNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMGHNVDRTLASFS 220
            + NSN  ++N   ++L   N   +   S  + + +NS+  +  + +   N D + +  S
Sbjct: 79  NSDNSNSDNSN--SDKLKLVNSNPDNSNSD-KLKLVNSN--SDKLNSDNSNSDNSNSDNS 133

Query: 219 GTSRANFN 196
            +  +N N
Sbjct: 134 NSDNSNSN 141


>SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1311

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
 Frame = -1

Query: 576  SSNYQQEKLPSN--YKTSRRESATKHKLECSKKETSKKFQ-SKRTKLNTETEEWNDSSHL 406
            SSN + E  P N     + + S+ K KL+   KE  K  Q S R K N    E +  SH 
Sbjct: 977  SSNSRIEDNPCNEGIDNNGKISSGKSKLKRISKEDGKHSQMSHRHKENNGKSEVDTDSHK 1036

Query: 405  LWQNRNSNKRHANLMPEELP 346
               NR+ +++H     E+ P
Sbjct: 1037 EDINRDRDRQHRRSKAEKKP 1056


>SB_51014| Best HMM Match : DUF963 (HMM E-Value=4.7e-07)
          Length = 206

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
 Frame = -1

Query: 546 SNYKTSRRESATKH-KLECSKKETSKKF-QSKRTKLNTETEEWNDSSHLLWQNRNSNKRH 373
           +N K++   +AT++   + +   T+ ++  +K T LNT TE  N  S LL    +     
Sbjct: 89  TNTKSTLLNTATEYTNTKSTLLNTATEYTNTKSTLLNTATEYTNTKSTLLNTATDYTNTE 148

Query: 372 ANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMGHNVDRTLASFS 220
           + L+     +TN  S  + +   +E+ N+     N+ T   N   TL + +
Sbjct: 149 STLLNTATEYTNTKSTLLNT--ATEYTNTKSTLMNIVTEYTNTKITLMNIA 197



 Score = 27.9 bits (59), Expect = 8.9
 Identities = 23/77 (29%), Positives = 31/77 (40%)
 Frame = -1

Query: 462 SKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSH 283
           +K T LNT TE  N  S LL          + LM     +TN  S  +     +E+ N+ 
Sbjct: 7   TKSTLLNTATEYTNTKSTLLNTATEYTNTKSTLMNIATEYTNTKSTLL--NIATEYTNTK 64

Query: 282 LVTSNVQTMGHNVDRTL 232
               N+ T   N   TL
Sbjct: 65  STLMNIATEYTNTKITL 81


>SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2671

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -1

Query: 531 SRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSS 412
           S +ES+T  K +CSK++ S K  +K   L  +  +W DS+
Sbjct: 528 SSKESSTSCK-KCSKEQMSNKENTKCVDLPLQNIQWEDST 566


>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
          Length = 4160

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
 Frame = -1

Query: 597  EDLKMRNSSNYQQEKLPSN------YKTSRRESATKHKLECSKKETSKKFQSKRTKLNTE 436
            EDLK R     +QEK   +      Y+  +++S  + +L  S+ E  + F+SK   +  E
Sbjct: 3600 EDLKHRLLRETEQEKKLHDGLKKDLYEAEKQKSDLQRELNQSRYEI-ESFKSKVELIEIE 3658

Query: 435  TEEWNDSSHLLWQNRNSNKRHANLMPEEL 349
              +W +    L +  N   +    + EEL
Sbjct: 3659 NRKWEEERRKLKEEANYANKELRSIQEEL 3687


>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1711

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 31/128 (24%), Positives = 58/128 (45%)
 Frame = -1

Query: 618  NYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNT 439
            N  + + E +++  S+NY   K    Y+T  +       L  S++E SKK+     K   
Sbjct: 1278 NELAEQAERIRVFESNNYGDAK--ELYETCNKLENEIGTLRESREELSKKYTQSVAK--- 1332

Query: 438  ETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQT 259
            E E     +HL+ +   SNK+   L+ EE+   + +  +  ++ QSE         +  +
Sbjct: 1333 EKE----LTHLV-ETLRSNKKQLELLVEEMKNESMLVEEQLNESQSEL---ETTRESCTS 1384

Query: 258  MGHNVDRT 235
            M  +++RT
Sbjct: 1385 MNSDLERT 1392


>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1266

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = -1

Query: 657 GDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATK-HKLECSKKE 481
           G +I     T   NY+   Y     R SS     +  +N   SRR ++ K  K + S   
Sbjct: 379 GSYITIRNWTRWSNYSGGGYSISNSRPSSRRNPRETKTNTPRSRRSNSRKTPKSKKSNLS 438

Query: 480 TSKKFQSKRTK 448
           T+   QS+R+K
Sbjct: 439 TAASDQSERSK 449


>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3760

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -1

Query: 504  KLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKR 376
            K+E  K++   + ++++ KLNT  EE +D+   L   + SN++
Sbjct: 1475 KIEAEKEQLLSELKTQKEKLNTVIEELDDTKSTLEIIKESNEK 1517


>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
          Length = 2478

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = -1

Query: 510  KHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYV 331
            K KLE    +  K  + K  K++ E +   D++  L  +++S     N M  E+   +  
Sbjct: 1206 KQKLE----QEMKAMEGKIKKMDAELQSVKDANRNLTSSKDSMLAEKNAMKSEIMRWSTK 1261

Query: 330  SNQMASQYQS 301
            +NQ+  QY++
Sbjct: 1262 TNQLMEQYRN 1271


>SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4)
          Length = 573

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
 Frame = -1

Query: 621 HNYTSHKYEDLKMRNSSNYQQEKLPS-----NYKTSRRESATKHKLECSKKETSKKFQ-- 463
           H       E+L  ++ +     ++PS     N +T  R +A   K++  K+ T    +  
Sbjct: 321 HQKVDPSQEELVAKSVTKPGTARMPSTARQRNQQTQSRATAGGIKMDTPKENTPAVMEQP 380

Query: 462 SK---RTKLNTETEEWNDSSHLLWQNRNSNKRHANLMP 358
           SK   R K+NT+ E+  +   L  QN +   +H NL P
Sbjct: 381 SKTLAREKVNTQKEKQQNHVFLEAQNADWAAKHENLSP 418


>SB_44100| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 341

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -1

Query: 708 QNSGNLMTGNYASGPFPGD--FIDYNQPTECHNYTSH 604
           +++ N+ T    S   P D  F  YNQ TE HN+T++
Sbjct: 250 ESTTNVATNTTTSLKLPEDIEFCIYNQETELHNFTAY 286


>SB_41617| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 675

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 14/62 (22%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -1

Query: 432 EEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQ-MASQYQSEFLNSHLVTSNVQTM 256
           E W    H + + R   +RH  L+P ++ + +Y+SN+ +  +   + + + L  + ++ +
Sbjct: 523 ETWTVYQHEVRELRTLQQRHLRLIP-QIKWDDYISNEDVLRRANVDDIETKLARNRLRWL 581

Query: 255 GH 250
           GH
Sbjct: 582 GH 583


>SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9)
          Length = 264

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = -1

Query: 687 TGNYASGPFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQ 562
           T N    PFPG+   Y QPT     T   Y   + R  + YQ
Sbjct: 182 TNNPMFRPFPGNPQGYQQPTTNQLPTDQAYRYRRPRGGARYQ 223


>SB_43321| Best HMM Match : Laminin_A (HMM E-Value=0.76)
          Length = 353

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -1

Query: 459 KRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQ 322
           K+  +     +WN  S      + S++R   LMPE +P  N +S +
Sbjct: 145 KKALMPEHMPDWNKMSDKEIVEKMSDRRKGELMPERMPDWNKISEK 190


>SB_29860| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 82

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/43 (27%), Positives = 26/43 (60%)
 Frame = -1

Query: 540 YKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSS 412
           ++  RR+++ KH  E +K+E    F++  T+L+T+ +   + S
Sbjct: 21  HQNHRRKNSEKHTQEENKRERGGYFETLVTRLHTQVDSQQNRS 63


>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2806

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 16/64 (25%), Positives = 31/64 (48%)
 Frame = -1

Query: 537  KTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMP 358
            K   RES   ++L    ++   K    RTK+N   ++ ND+  +  +     K++   +P
Sbjct: 1272 KRLNRESVASYELNVVVQDKRTKRTLDRTKVNITVDDSNDNRPIFLK-----KKYLKTIP 1326

Query: 357  EELP 346
            E++P
Sbjct: 1327 EDIP 1330


>SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)
          Length = 872

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -1

Query: 726 FYSNFMQNSGNLMTGNYASGPFPGDFIDYNQPTECHNYTSHKY 598
           +Y+      GN   GNYA G + G         +C NYT   Y
Sbjct: 641 YYAGGYYTDGNYTDGNYAGGNYAGGNYAGGNYADC-NYTGGNY 682


>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
          Length = 1806

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = -1

Query: 417  SSHLLWQNRNSNK-RH----ANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMG 253
            SS+    NRN  + RH      L   ++P +  V+NQMAS     + ++     +  T  
Sbjct: 1693 SSYSFTTNRNHTQGRHPCAQGPLSTGQIPLSVSVTNQMASPDSCMYSSNATPYMSYNTNA 1752

Query: 252  HNVDRTLASFSGTSRA 205
            +  DR L   SGT  A
Sbjct: 1753 YTQDRPLMPHSGTGLA 1768


>SB_57555| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 323

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = -1

Query: 606 HKYEDLKMRNSSNYQQEKLPSNYKTSRRESATK--HKLECSKKETSKKFQSKRTKLNTET 433
           H+   ++ RN +  Q  +  +  K    +S+ K  H L   KK++     SK    N + 
Sbjct: 147 HRLSKVEFRNPNIEQSSEFMAEIKEEENDSSEKDKHNLGLKKKDSRPSVVSKDHVSNLDN 206

Query: 432 EEWNDSSH 409
              ND  H
Sbjct: 207 GRDNDQVH 214


>SB_47440| Best HMM Match : SURF6 (HMM E-Value=0.96)
          Length = 279

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -1

Query: 531 SRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWN--DSSHLLWQNRNSNKRHANLMP 358
           SR+++A   K E  + +  +  + K  K N+  +E     ++   ++NR S KR  + + 
Sbjct: 6   SRKQAAALKKKEIKRAKRQRLLREKSRKENSSGQEKEILQNTGERFKNRTSKKRVTDKVK 65

Query: 357 EELPFT 340
           ++LP T
Sbjct: 66  DKLPQT 71


>SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07)
          Length = 711

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 15/67 (22%), Positives = 31/67 (46%)
 Frame = -1

Query: 648 IDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKK 469
           +D N+  ECHN  + + + L    S +  ++   +       E  +KH+++ S  +   +
Sbjct: 308 VDNNRGVECHNQETVQRKGLTNEESLDCSKKLQDNTAVNDESECFSKHQVQSSGYDCRNE 367

Query: 468 FQSKRTK 448
             S+ TK
Sbjct: 368 QCSENTK 374


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,464,610
Number of Sequences: 59808
Number of extensions: 438195
Number of successful extensions: 1447
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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