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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C11
         (639 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.085
SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)                        33   0.15 
SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.60 
SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)             31   1.0  
SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.4  
SB_36148| Best HMM Match : Laminin_EGF (HMM E-Value=4.7)               29   4.2  
SB_12584| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.2  
SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)              28   5.6  
SB_25705| Best HMM Match : PH (HMM E-Value=2e-17)                      28   7.4  
SB_26352| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  
SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  

>SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 150

 Score = 34.3 bits (75), Expect = 0.085
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
 Frame = +3

Query: 72  SGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGERNAEYEQ 218
           SG+ + D     Y+ ++ K+K H++  F I D+          K++D  T  E  A ++Q
Sbjct: 4   SGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAIFDQ 63

Query: 219 FLEDLQKGGTGECRYGLFDFEY 284
            LE L      E RY L+D  +
Sbjct: 64  MLEKL---SDSEPRYILYDLNF 82


>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
          Length = 387

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +1

Query: 310 EASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKK 414
           E + + KL L+ WCPD   +   M+ +++F  +KK
Sbjct: 323 EGADRSKLVLIFWCPDNCEIKSRMVSAATFQDVKK 357


>SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 140

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 310 EASKKQKLFLMSWCPDTAXVXXXMLYSSSFDALKK 414
           E +++ KL L+ WCPD   +   M+ +++F  + K
Sbjct: 76  EGAERSKLVLIFWCPDNCGIKNKMVSAATFKEVMK 110


>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
          Length = 151

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
 Frame = +3

Query: 72  SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGERNAEYEQ--FLED 230
           SG+ V D      + +K  K H+Y +F I DE  + V     ++V     E ++  F + 
Sbjct: 4   SGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIFYQM 63

Query: 231 LQKGGTGECRYGLFDFEY 284
           ++K    E RY L+D ++
Sbjct: 64  VEKLSDREPRYILYDMKF 81


>SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 237

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -3

Query: 283 YSKSNRPYLHSPVP-PFCRS--SRNCSYSALRSP 191
           YS  +RPY HSPV  P+C S   R   YS +  P
Sbjct: 112 YSPVDRPYCHSPVDRPYCHSPVDRPYCYSPVDHP 145


>SB_36148| Best HMM Match : Laminin_EGF (HMM E-Value=4.7)
          Length = 540

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = -2

Query: 332 SFCFLLASDVXLALV----RVFKVKQAISAFPGTALLQILEELFVFGVAFANRLDVDLFL 165
           S CFL  + V L L+    R F  +  +  FP     + +    +  + F +R  VD+FL
Sbjct: 441 SMCFLSRAHVDLFLIACSCRCFPSRSHVDVFPIAFSCRCVSHHVLMSMCFPSRAHVDVFL 500

Query: 164 V 162
           +
Sbjct: 501 I 501


>SB_12584| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 692

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/62 (29%), Positives = 23/62 (37%)
 Frame = +1

Query: 409 KKSLXRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARDETEPALRHSCPDDTRP 588
           ++ L   +   P DRP        +   P  RS   S Y   RD    A +  C D  R 
Sbjct: 447 RQKLIHLARKTPRDRPRARAHDTDQPSDPCQRSADQSPYPTQRDSQPGAGKRPCSDAGRH 506

Query: 589 RH 594
           RH
Sbjct: 507 RH 508


>SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)
          Length = 643

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 202 TPNTNSSSRICRRAVPGNADMAC 270
           +P T  SSR C   VPG+AD  C
Sbjct: 14  SPRTGRSSRSCSIPVPGHADHHC 36


>SB_25705| Best HMM Match : PH (HMM E-Value=2e-17)
          Length = 409

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +2

Query: 470 QEAVEEKLRATDRQ*TAFTHEL--ATKPNPLSDTPALTTRGH 589
           +E    K+ AT+    AFTH+L    KP  +SD P +  +G+
Sbjct: 22  EETPPIKIEATNHHAKAFTHDLENLAKPLKVSDVPNVFLQGY 63


>SB_26352| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 283

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +1

Query: 382 LYSSSFDALKKSLXRSSEVHPSDRPLGSVSGG-RRREAPRHRSPINSI--YTRAR 537
           L  + FD + K    S E++P D  + +++    R++A   R  IN++  YT+ R
Sbjct: 66  LKEAGFDEIVKKYRDSKEINPEDLDVQNITSSLTRKQAEAVRRRINTLNEYTKKR 120


>SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 445

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 289 CVYSKSNRPYLHSPVPPFCRSSRNCSYSALRS 194
           CVY     PY+ S +PP   +S   S   LRS
Sbjct: 292 CVYGWVALPYMSSTLPPVAYTSSGLSAGPLRS 323


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,577,778
Number of Sequences: 59808
Number of extensions: 345222
Number of successful extensions: 1083
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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