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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_C03
         (651 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_32980| Best HMM Match : DEAD (HMM E-Value=0)                       136   2e-32
SB_17563| Best HMM Match : DEAD (HMM E-Value=0)                        86   3e-17
SB_2247| Best HMM Match : DEAD (HMM E-Value=0)                         86   3e-17
SB_52320| Best HMM Match : DEAD (HMM E-Value=0)                        72   5e-13
SB_9558| Best HMM Match : DEAD (HMM E-Value=0)                         66   2e-11
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)              63   2e-10
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)                    62   3e-10
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)              62   3e-10
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)              56   2e-08
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)              54   1e-07
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)              51   9e-07
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)              51   9e-07
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)                  50   2e-06
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)              50   2e-06
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)                   50   2e-06
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)              48   9e-06
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   8e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   8e-05
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)               43   2e-04
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)                  41   0.001
SB_37351| Best HMM Match : DEAD (HMM E-Value=0)                        41   0.001
SB_43842| Best HMM Match : RNB (HMM E-Value=0)                         40   0.002
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)                36   0.038
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.12 
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)                  33   0.15 
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)                   31   1.1  
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)                  29   4.3  
SB_1095| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.3  
SB_54877| Best HMM Match : NAD_binding_4 (HMM E-Value=0)               28   5.7  
SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2)                     28   5.7  
SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)              28   5.7  
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)                   28   7.6  

>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 985

 Score =  136 bits (328), Expect = 2e-32
 Identities = 70/132 (53%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
 Frame = +2

Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
           RT DV I E + F S+LLS   L GL  +GF+KPSPIQL  +PLG+CG DL+ +AKSGTG
Sbjct: 3   RTTDVLIEEQIDFHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTG 62

Query: 437 KTVVFSIIALEK-LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSV 613
           KT VFS+IALE  +  +N +Q++ILTPTREI   + DVI  IG H+ GL  +  +GG+S+
Sbjct: 63  KTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISL 122

Query: 614 NEXIXKFXKKVH 649
            E   K  K  H
Sbjct: 123 EED-KKALKSCH 133


>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 85.8 bits (203), Expect = 3e-17
 Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
 Frame = +2

Query: 248 NSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 427
           N  +T DV   +   F    L    L G+   GF KPSPIQ   +P+   G D+L  AK+
Sbjct: 34  NRFKTSDVTATKGNEFEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKN 93

Query: 428 GTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
           GTGKT  + +  LE+ +   N +Q ++L PTRE+      +  ++G  H G  V    GG
Sbjct: 94  GTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGK-HMGAQVMVTTGG 152

Query: 605 LSVNEXIXKFXKK 643
            S+ + I +   K
Sbjct: 153 TSLKDDILRLYNK 165


>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 85.8 bits (203), Expect = 3e-17
 Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
 Frame = +2

Query: 248 NSTRTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 427
           N  +T DV   +   F    L    L G+   GF KPSPIQ   +P+   G D+L  AK+
Sbjct: 34  NRFKTSDVTATKGNEFEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKN 93

Query: 428 GTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
           GTGKT  + +  LE+ +   N +Q ++L PTRE+      +  ++G  H G  V    GG
Sbjct: 94  GTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGK-HMGAQVMVTTGG 152

Query: 605 LSVNEXIXKFXKK 643
            S+ + I +   K
Sbjct: 153 TSLKDDILRLYNK 165


>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 340

 Score = 71.7 bits (168), Expect = 5e-13
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
 Frame = +2

Query: 257 RTRDVQIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 436
           R +++   E   F+   +S+ TL GL+ +GF  P+ IQ  G+P+   G D+L  AK+G+G
Sbjct: 40  RCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSG 99

Query: 437 KTVVFSIIALE-----KLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMG 601
           KT+ F I  +E     K    +GL  ++++PTRE+     +V+ +IG+ H  L+   ++G
Sbjct: 100 KTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKH-DLSAGLIIG 158

Query: 602 G 604
           G
Sbjct: 159 G 159


>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 436

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
 Frame = +2

Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
           +F  + L+++ ++  ++ G +KP+ IQL+ VP    G D +  AK+G+GKT  F++  L+
Sbjct: 8   SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67

Query: 470 KL-NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
           KL +   G+  ++LTPTRE+   I D  K +G    GL    ++GGL + +       K 
Sbjct: 68  KLCDDPYGIFAVVLTPTRELAFQIADQFKVLG-RPIGLKEAVIVGGLDMMKQALSLANKP 126

Query: 647 H 649
           H
Sbjct: 127 H 127


>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 370

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 338 SSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILT 511
           + GF+KPS IQ   + P+ K G D++ +A+SGTGKT  FSI  L+ ++      Q ++L+
Sbjct: 14  TEGFEKPSAIQQRAIKPILK-GRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLS 72

Query: 512 PTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
           PTRE+   I  V+  +G  +  +     +GG ++ E I K     H
Sbjct: 73  PTRELANQIQKVVLALGD-YMSVQCHACIGGTNIGEDIRKLDYGQH 117


>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
          Length = 475

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
 Frame = +2

Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
           F   LL    L  ++  GF+ PS +Q   +P    G D++ +AKSG GKT VF +  L++
Sbjct: 49  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108

Query: 473 LNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
           L   +G + V+++  TRE+   I    ++   +   + +    GG+++ +
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKK 158


>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 208

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
 Frame = +2

Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
           F   LL    L  ++  GF+ PS +Q   +P    G D++ +AKSG GKT VF +  L++
Sbjct: 49  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108

Query: 473 LNLNNG-LQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNE 619
           L   +G + V+++  TRE+   I    ++   +   + +    GG+++ +
Sbjct: 109 LEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKK 158


>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1448

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
 Frame = +2

Query: 308 LSEFTLAGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVFSIIALEKL--- 475
           +SE TL G+   GF   + IQ   + PL K G DLL  AK+G+GKT+ F +  +E L   
Sbjct: 579 VSEKTLQGIKDMGFTTMTEIQHKSIAPLLK-GRDLLGAAKTGSGKTLAFLVPVVELLYKL 637

Query: 476 --NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
                NG  V+I++PTRE+      V + +  HH       +MGG++      +  K V+
Sbjct: 638 QFKTRNGTGVIIISPTRELSLQTYGVARDLLKHH-NFTYGIIMGGVNRKAEAERLQKGVN 696


>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 478

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 29/155 (18%)
 Frame = +2

Query: 272 QIVENVTFTSMLLSEFTLAGLISSGFQKPSPIQLHGV--------PLGKC---------- 397
           ++VE+  F  M L E  L G+ + GF+KPS IQ   +        P   C          
Sbjct: 60  EVVES--FDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQLNLTKNH 117

Query: 398 ----GFDLLLEAKSGTGKTVVFSIIALEKLNLN----NG---LQVMILTPTREIXAXICD 544
                 D++ +A+SGTGKT  F+I  L++++ N    NG    Q ++L PTRE+   I  
Sbjct: 118 YVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQK 177

Query: 545 VIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
           V+  +G  +  +     +GG +V E   K  + VH
Sbjct: 178 VVLALGD-YMHVKCHACIGGTNVREDRMKLEEGVH 211


>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 797

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
 Frame = +2

Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
           +F  +   E  +A +  +G+++P+P+Q   +P+   G DL+  A++G+GKT  + +  L 
Sbjct: 480 SFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPVLT 539

Query: 470 KLNLNNGLQ-------VMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIX 628
            L +  GL         + + PTRE+   I    ++  S H  + V    GG+SV     
Sbjct: 540 SL-IKQGLNAPPRSPLALCVAPTRELAKQIYIEARKF-SDHTPIKVCVCYGGVSVPYQAS 597

Query: 629 KFXKKVH 649
           +  +  H
Sbjct: 598 QLERGCH 604


>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1039

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
 Frame = +2

Query: 380 VPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIXAXICDVI 550
           +PL   G D++  A++G+GKT  F I   EKL  +    G++ +IL+PTRE+       I
Sbjct: 312 LPLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQTQKFI 371

Query: 551 KQIGSHHKGLNVEXVMGGLSV 613
           K++G    GL    ++GG SV
Sbjct: 372 KELG-RFTGLKSSVILGGDSV 391


>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
          Length = 428

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
 Frame = +2

Query: 344 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS------IIALEKLNLNN----GL 493
           G++ P+PIQ   +P+G    D++  A++G+GKT  F+      I+ L K+  +N    G 
Sbjct: 120 GYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGP 179

Query: 494 QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
             +IL PTRE+   I + I + G    G+    V+GG
Sbjct: 180 YALILAPTRELAQQIEEEILKFG-RPLGIRTVSVIGG 215


>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
          Length = 490

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
 Frame = +2

Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 463
           +F  + LS     G+   GF KPS IQ   +P  L     +++ +++SGTGKT  F +  
Sbjct: 104 SFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLTM 163

Query: 464 LEKLNLNNGL-QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
           L +++      QV+ L+PT E+      V + +G H   + +   + G
Sbjct: 164 LSRVDATKPYPQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRG 211


>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
          Length = 96

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
 Frame = +2

Query: 344 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----NLNNGLQVMILT 511
           GF  P+PIQ   +P+   G D+   A +GTGKT  F +  LE+L      +  ++V+++T
Sbjct: 29  GFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAIRVLVIT 88

Query: 512 PTREI 526
           PTRE+
Sbjct: 89  PTREL 93


>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 790

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
 Frame = +2

Query: 287 VTFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF----- 451
           ++F      E  +A +    + +P+ IQ   +P+   G D++  AK+G+GKT  F     
Sbjct: 517 ISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPAL 576

Query: 452 -SIIALEKLNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGG 604
             I+   +L + +G  V+I  PTRE+   I    ++ G  +  ++V  V GG
Sbjct: 577 VHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAY-NIHVVAVFGG 627


>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1375

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 21/61 (34%), Positives = 37/61 (60%)
 Frame = +2

Query: 293  FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
            F  + L E  L  +  +G++KP+P+Q + +P+ K   DL+  A++G+GKT  F I  L +
Sbjct: 877  FEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPILSR 936

Query: 473  L 475
            +
Sbjct: 937  I 937


>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1170

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
 Frame = +2

Query: 290  TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 469
            +F    L E  L  +  + ++KP+P+Q + +P+   G D++  A++G+GKT  F +  + 
Sbjct: 712  SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPVMT 771

Query: 470  KLNLNNGL-----------QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVN 616
             + +N GL           Q M + PTRE+   I    ++  +H   L      GG+SV+
Sbjct: 772  SM-MNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKF-AHGTMLRPVVCYGGVSVS 829

Query: 617  EXI 625
              +
Sbjct: 830  HQL 832


>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
          Length = 238

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +2

Query: 404 DLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIXAXICDVIKQIGSHHKGL 580
           D++  A++G+GKT  F++  L+ L  N   L  +ILTPTRE+   I +  + +GS   G+
Sbjct: 3   DVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQISEQCEALGS-GIGV 61

Query: 581 NVEXVMGGLSVNEXIXKFXKKVH 649
               ++GG+ +        KK H
Sbjct: 62  KCAVIVGGIDMMSQALMLAKKPH 84


>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
          Length = 559

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
 Frame = +2

Query: 344 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 523
           G  KP PIQ   +P       LL+++++GTGK++VF + +++  +   G   +I+ PTRE
Sbjct: 179 GITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSVQ--DPGRGYGTIIVVPTRE 236

Query: 524 IXA-XICDVIKQIGSHHKGLNVEXVMG-GLSVNEXIXK 631
           + +  + +V + +G   K +    V G  LS  E + K
Sbjct: 237 LASQMLYEVSRLLGD--KSIVASFVSGVDLSRQEKLLK 272


>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 688

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
 Frame = +2

Query: 293 FTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 472
           F+   +S+ T+  L   G     PIQ         G D++ +A++GTGKT+ F++  +EK
Sbjct: 75  FSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEK 134

Query: 473 L-------NLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGL 607
           L             +V+++ PTRE+   + +  + + S+   L V  + GG+
Sbjct: 135 LQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENLKSN---LEVYCIYGGM 183


>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
          Length = 1238

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
 Frame = +2

Query: 332 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI----IALEKLNLNNG--L 493
           L    FQ P+PIQ+  +     G D++  A++G+GKT+ +S+    +   K   N G   
Sbjct: 87  LAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTP 146

Query: 494 QVMILTPTREI 526
             +ILTPTRE+
Sbjct: 147 VALILTPTREL 157


>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
          Length = 185

 Score = 35.5 bits (78), Expect = 0.038
 Identities = 16/51 (31%), Positives = 31/51 (60%)
 Frame = +2

Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 442
           +F    L E  L  +  + ++KP+P+Q + +P+   G D++  A++G+GKT
Sbjct: 135 SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185


>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 697

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 323 LAGLISSGFQKPSPIQLHGVPLGKCGF-DLLLEAKSGTGKTVVFSIIALEKL 475
           L  L   GF KP+PIQ   +P       D++  A++G+GKT+ F I  ++ +
Sbjct: 142 LRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHI 193


>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
          Length = 500

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 20/65 (30%), Positives = 36/65 (55%)
 Frame = +2

Query: 332 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILT 511
           L + G+  P+PIQ+  +P+   G D+++ A +G+GK +  S           G+QV++ T
Sbjct: 211 LSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGKLLPSS--------PEMGVQVIVAT 262

Query: 512 PTREI 526
           P R +
Sbjct: 263 PGRMV 267


>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
          Length = 120

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +2

Query: 494 QVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKVH 649
           Q ++L+PTRE+   I  V+  +G  +  +     +GG ++ E I K     H
Sbjct: 5   QALVLSPTRELANQIQKVVLALGD-YMSVQCHACIGGTNIGEDIRKLDYGQH 55


>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
          Length = 690

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +2

Query: 473 LNLNNGLQVMILTPTREIXAXICDVIKQIGSHHKGLNVEXVMGGLSVNEXIXKFXKKV 646
           L   +G  V++L PTRE+   + +V   +G H K L    + GG      I +  + V
Sbjct: 127 LQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCK-LRSTCIYGGAPKGPQIRELERGV 183


>SB_1095| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 98

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +2

Query: 290 TFTSMLLSEFTLAGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 418
           TFT++ +S   +A LISS     +P+   G+P GK  + + LE
Sbjct: 6   TFTALCISVLIVAILISSARASKNPVP--GIPFGKRSYLVRLE 46


>SB_54877| Best HMM Match : NAD_binding_4 (HMM E-Value=0)
          Length = 373

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = +2

Query: 218 AVMSLAHDIRNSTRTRDVQIVENVTF--TSMLLSEFTLAGLISSGFQKPSPIQLHGVPLG 391
           A+     D R +T T    + E+V     S L        +I + F++P P+   G+P+ 
Sbjct: 174 AITPYVIDQRPNTYTFTKSLAEHVLLQEASGLPVSIFRPSIIGASFKEPLPVPSDGIPVY 233

Query: 392 KCGFDLL 412
            CG  +L
Sbjct: 234 NCGTGVL 240


>SB_18731| Best HMM Match : DUF1309 (HMM E-Value=2)
          Length = 356

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 134 RPAVLFHFPTFVHFHRY*TVNKPPLLHS 51
           RPA+++H P  V FH+   V   P+LHS
Sbjct: 196 RPAIIYHQPPIV-FHQPPPVVNQPILHS 222


>SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)
          Length = 1099

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = -2

Query: 185 LIRFKISVDFMEDPEKL-RPAVLFHFPTFVHFHRY*TVNKPPLLHS 51
           ++ ++  + + + P  + RPA+++H P+ V FH+   V   P++HS
Sbjct: 702 IVLYRAPIIYHQPPVVVHRPAIVYHQPSIV-FHQPPPVVNQPIMHS 746


>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
          Length = 705

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 274 NSGKCYVHFHASFRIYTSRIDIIGVPKTISNSTS 375
           N+GKC    HA F +       +G PKT ++ T+
Sbjct: 277 NTGKCLDPTHADFLLREPTYQGVGAPKTTASPTT 310


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,160,332
Number of Sequences: 59808
Number of extensions: 364783
Number of successful extensions: 981
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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