Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_A12
(525 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 6e-37
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 6e-37
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 150 6e-37
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 150 6e-37
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 127 6e-30
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 124 6e-29
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 123 8e-29
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 59 2e-09
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 45 4e-05
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 41 5e-04
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 38 0.004
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.027
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.14
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.25
SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07) 32 0.33
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 31 0.77
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 2.3
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 29 3.1
SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 28 4.1
SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 28 5.4
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 27 9.5
SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07) 27 9.5
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 517 IQKESTLHLVLRLRGG 532
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 365 IQKESTLHLVLRLRGG 380
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 150 bits (364), Expect = 6e-37
Identities = 73/76 (96%), Positives = 74/76 (97%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 221 IQKESTLHLVLRLXGG 268
IQKESTLHLVLRL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 82.6 bits (195), Expect = 2e-16
Identities = 41/71 (57%), Positives = 55/71 (77%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QI VK KT TL+VEASDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYN
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYN 135
Query: 221 IQKESTLHLVL 253
I++ S LHL L
Sbjct: 136 IKQGSILHLFL 146
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 127 bits (306), Expect = 6e-30
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+QIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 138
Query: 221 IQK 229
IQK
Sbjct: 139 IQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 124 bits (298), Expect = 6e-29
Identities = 58/62 (93%), Positives = 58/62 (93%)
Frame = +2
Query: 146 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLXGGTIEPSLRILAMKYNCXKMI 325
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL GG IEPSLRILA KYNC KMI
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMI 61
Query: 326 CR 331
CR
Sbjct: 62 CR 63
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 123 bits (297), Expect = 8e-29
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = +2
Query: 230 ESTLHLVLRLXGGTIEPSLRILAMKYNCXKMICRKCYARLHPRATNCRKTKCGHTNNLRP 409
ESTLHLVLRL GG IEPSLRILA KYNC KMICRKCYARLHPRATNCRK KCGH+NNLRP
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHSNNLRP 73
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = +2
Query: 230 ESTLHLVLRLXGGTIEPSLRILAMKYNCXKMICR 331
ESTLHLVLRL GG IEPSLRILA KYNC KMICR
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICR 47
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 59.3 bits (137), Expect = 2e-09
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 47 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 223
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 224 QKESTLHLVLRLXGGTIEPSLRI 292
+TLHL++RL GG P+ R+
Sbjct: 133 FAGATLHLIVRLLGGEC-PTYRL 154
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +2
Query: 26 IGATQLQIFVKTLTGKTITLEVEASDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLED 196
I + + I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D
Sbjct: 62 IKSVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILND 121
Query: 197 GRTLSDYNIQKES 235
L +YNI ++S
Sbjct: 122 DNPLKEYNIDEKS 134
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 41.1 bits (92), Expect = 5e-04
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 26 IGATQLQIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 202
+G Q+F T TL +D + +K++I+ K GIP D QRL F K+L D
Sbjct: 1 MGEETFQVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDA 60
Query: 203 TLSDYNIQK 229
TL+ N+++
Sbjct: 61 TLAKVNLKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 217
+++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 218 NIQKESTLHLVLR 256
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +2
Query: 65 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 244
+G L++ + TIE ++ ++ DK G PP QR I K + +L +++
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRETGFTA 103
Query: 245 LVLRLXGGTIE 277
+ L G +E
Sbjct: 104 YLYLLSGRNVE 114
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 35.5 bits (78), Expect = 0.027
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 137 KEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
+EGIP ++QRLIF GK L+D + L +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 142
+ ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 143 GIPPDQQRLIFAGKQLEDGRTLSDYN 220
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 47 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-NI 223
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + + ++
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 224 QKESTLHLVLRLXGGTIEPSLR 289
QK + + V L ++ LR
Sbjct: 245 QKATFVVAVNPLWEHFVDACLR 266
>SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07)
Length = 642
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 439 GYYLILDXLFGSQIVSVSALCLATVGSTRMKTGIAFTANHF 317
G +++ L G+ V +S+LC A GS KTG ++T +F
Sbjct: 19 GPAIVISLLIGAIPVCLSSLCYAEFGSRISKTGSSYTYTYF 59
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 104 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 247
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 30.7 bits (66), Expect = 0.77
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 50 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 229
FV G+ ITL + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 230 ESTLHLVLR 256
+TL + L+
Sbjct: 229 GATLQIELQ 237
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 53 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--NIQ 226
+K G+ ++ + +D ENV I+ PD ++ I G L+DG+T+ D + +
Sbjct: 510 LKGKLGRNLSRCILGNDETENV-GNIESS----PDSKKNILEGLDLQDGKTVEDLLSDYR 564
Query: 227 KESTLHLVLRLXGGTI 274
+E L+ ++ GT+
Sbjct: 565 RELELYRQIKDENGTV 580
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 68 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 196
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/62 (24%), Positives = 35/62 (56%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
LQ ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T ++
Sbjct: 714 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDTEEK 773
Query: 221 IQ 226
+Q
Sbjct: 774 LQ 775
>SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 165 VSSLPGNN*KMAALFQTITSRKNPHFTWF 251
+ ++ N K+AA+ I+S NP FTWF
Sbjct: 8 IGAIASNAEKVAAVAGAISSLDNPGFTWF 36
>SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 44 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYN 220
+I V+ TGK+I + E I++ K+Q + + Q F G ++ + RTL+ +
Sbjct: 439 KILVRGKTGKSIVDDKEMDKEIDSFDRKVQIERSV----QETDFRGSKVSNNNRTLAGQD 494
Query: 221 IQKESTLHLVLRLXGGTIEP 280
K HL + G + P
Sbjct: 495 TPKSLDDHLSVASLGQKLSP 514
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +2
Query: 41 LQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 220
LQ ++T GKTI L E + ++ + ++K+G+ + + L + ++L+ T ++
Sbjct: 10 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDTEEK 69
Query: 221 IQ 226
+Q
Sbjct: 70 LQ 71
>SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -3
Query: 163 LLVWRNT-FLVLDFSFDIFDSVGSFHLQCNGLPRKGFDEYLQLCCSYEK---RAWK 8
L +W T FL+ F + +LQ G +GF +L CC E+ R WK
Sbjct: 820 LRIWGTTRFLLYAFGDTTHNETWMVYLQGIGDSGQGFANFLLFCCLTERFKTRLWK 875
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 62 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 193
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 356 EDEDGHSIYGKSFXHSYTSWRECEGKV 276
++E I SF T WR CEG++
Sbjct: 775 DEEMNQVIISSSFSAKLTKWRVCEGQI 801
>SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07)
Length = 503
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 308 NCXKMICRKCYARLHPRATNCRKTKCGHTNNLRP 409
N ++CR C R +P KC +T N RP
Sbjct: 347 NADYVLCRYCQRRFNPTVAERHIPKCANTTN-RP 379
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,004,368
Number of Sequences: 59808
Number of extensions: 341801
Number of successful extensions: 864
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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