Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_B02
(889 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 2e-44
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 56 3e-08
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 56 3e-08
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 55 9e-08
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 47 2e-05
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 47 2e-05
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 46 3e-05
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 45 9e-05
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 43 4e-04
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.058
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 36 0.058
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.058
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 31 1.2
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_59661| Best HMM Match : PMP22_Claudin (HMM E-Value=0.26) 31 1.2
SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10) 31 1.2
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 30 2.9
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 29 3.8
SB_10713| Best HMM Match : Peptidase_C32 (HMM E-Value=3.3) 29 3.8
SB_39666| Best HMM Match : Fe-ADH (HMM E-Value=0.59) 29 3.8
SB_5262| Best HMM Match : IncA (HMM E-Value=2.1) 29 3.8
SB_31743| Best HMM Match : IncA (HMM E-Value=1.4) 29 5.0
SB_20223| Best HMM Match : IncA (HMM E-Value=1.4) 29 5.0
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 29 5.0
SB_47226| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056) 29 5.0
SB_17511| Best HMM Match : Flagellin_IN (HMM E-Value=5.6) 29 5.0
SB_58552| Best HMM Match : UbiD (HMM E-Value=1.1) 29 6.6
SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_8101| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_2468| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_45370| Best HMM Match : Flagellin_IN (HMM E-Value=6.9) 29 6.6
SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_19157| Best HMM Match : FLO_LFY (HMM E-Value=0.27) 29 6.6
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 176 bits (429), Expect = 2e-44
Identities = 88/175 (50%), Positives = 111/175 (63%)
Frame = +3
Query: 339 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALKEXXXXXXXXXXPMDLFDMXXXXX 518
KNP+EG++FKQISQAYEVLS+ KR+IYD+GGE A+K PMD+FDM
Sbjct: 96 KNPDEGDRFKQISQAYEVLSDEKKRKIYDEGGEDAIK-GGGEGGGFHSPMDIFDMFFGTG 154
Query: 519 XXXXXXXXXXXXXDVIHQLSVTLEELYCGTVRKLTLQKNVIXXXXXXXXXXXXAVQTCPV 698
D++HQL VTLEELY G R+L LQKNVI V++C
Sbjct: 155 RAAHQGERRGK--DMVHQLRVTLEELYNGATRQLALQKNVICSKCDGRGGKEGCVESCQT 212
Query: 699 CRGSGMQVQIQQLGPGMIQQIQTVCCECRGQKEIVXPKDRCKVCXGRKIVRDRKI 863
C GSGM V+I ++ PGM+QQIQTVC +C G+ E + KDRCK C G+K+VR+RKI
Sbjct: 213 CHGSGMYVRINRIAPGMVQQIQTVCRDCGGKGEKIPEKDRCKNCHGKKVVRERKI 267
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 230 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPXQEPK*G 355
MVKET YYDIL V P T E HP + P G
Sbjct: 60 MVKETAYYDILNVPPTATATEIKKSYRKLALKYHPDKNPDEG 101
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 56.4 bits (130), Expect = 3e-08
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +3
Query: 339 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALKE 452
KNP+ GEKFK I+ AYE+LS+P+KR +YD+ GE+ L+E
Sbjct: 36 KNPDTGEKFKDITFAYEILSDPEKRELYDRYGEKGLRE 73
Score = 49.6 bits (113), Expect = 3e-06
Identities = 17/40 (42%), Positives = 31/40 (77%)
Frame = +3
Query: 678 AVQTCPVCRGSGMQVQIQQLGPGMIQQIQTVCCECRGQKE 797
A++ C C+G G++V I+ +GPGM+QQ+Q++C +C G+ +
Sbjct: 134 AMRPCAGCKGRGVKVTIKPIGPGMVQQMQSMCHDCSGEDD 173
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 56.4 bits (130), Expect = 3e-08
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +3
Query: 339 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALKE 452
KNP+ GEKFK I+ AYE+LS+P+KR +YD+ GE+ L+E
Sbjct: 36 KNPDTGEKFKDITFAYEILSDPEKRELYDRYGEKGLRE 73
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 54.8 bits (126), Expect = 9e-08
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +3
Query: 339 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALK 449
K+P EKFK+IS+AYEVLS+P K+ IYDQ GE+ LK
Sbjct: 37 KSPGAEEKFKEISEAYEVLSDPKKKEIYDQYGEEGLK 73
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +3
Query: 339 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALK 449
K+P EKFK+I++AYEVLS+P KR I+DQ GE+ LK
Sbjct: 37 KDPGAEEKFKEIAEAYEVLSDPQKREIFDQYGEEGLK 73
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 47.2 bits (107), Expect = 2e-05
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +3
Query: 342 NPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALKEXXXXXXXXXXPMDL--FDMXXXX 515
+P EKF I AYEVL++ D+R+IYDQ GE+ LK F
Sbjct: 60 DPKAQEKFHDIGAAYEVLADDDQRKIYDQRGEEGLKNAGHRDHSDPFSSFFGGFGFHFDG 119
Query: 516 XXXXXXXXXXXXXXDVIHQLSVTLEELYCG 605
D+ L VTLEELY G
Sbjct: 120 HNGHSHSQQVPRGSDLTVDLEVTLEELYNG 149
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +3
Query: 339 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALK 449
K + EKF+++++AYEVLS+ +KRR YDQ GE+ LK
Sbjct: 59 KGKDAEEKFREVAEAYEVLSDENKRRQYDQFGEEGLK 95
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/39 (56%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Frame = +3
Query: 339 KNPNEG--EKFKQISQAYEVLSNPDKRRIYDQGGEQALK 449
KN N G EKFK+IS+AY+VL++P +R I+D GE+ LK
Sbjct: 35 KNKNSGAEEKFKEISEAYKVLTDPRQRDIFDMYGEEGLK 73
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 44.8 bits (101), Expect = 9e-05
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +3
Query: 339 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQGGEQALK 449
+ P+ KF+Q ++AY+VLS+P KR IY+Q GE+ LK
Sbjct: 37 QEPSAEVKFRQAAEAYDVLSDPKKRAIYNQFGEEGLK 73
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 42.7 bits (96), Expect = 4e-04
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = +3
Query: 357 EKFKQISQAYEVLSNPDKRRIYDQGGEQAL 446
EKFK++S+AYEVLS+ +KR IYD+ G++ L
Sbjct: 45 EKFKKLSEAYEVLSDKEKRDIYDKYGKEGL 74
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 39.9 bits (89), Expect = 0.003
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +3
Query: 339 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQGGE 437
K+ + EKF+++S+AYEVLS+ KR+ YD G+
Sbjct: 92 KDKSASEKFQEVSEAYEVLSDDGKRKAYDSFGQ 124
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 37.1 bits (82), Expect = 0.019
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +3
Query: 363 FKQISQAYEVLSNPDKRRIYDQGGEQALK 449
F++I QAY+VLS+P +R YD+ EQ L+
Sbjct: 47 FREIQQAYDVLSDPQERAFYDKHREQILR 75
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 35.5 bits (78), Expect = 0.058
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +3
Query: 357 EKFKQISQAYEVLSNPDKRRIYDQG 431
++FK++++AY +LS+P K+R YD G
Sbjct: 204 KQFKEVNEAYSILSDPKKKRRYDSG 228
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 35.5 bits (78), Expect = 0.058
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +3
Query: 357 EKFKQISQAYEVLSNPDKRRIYDQG 431
++FK++++AY +LS+P K+R YD G
Sbjct: 204 KQFKEVNEAYSILSDPKKKRRYDSG 228
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 35.5 bits (78), Expect = 0.058
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 339 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQ 428
KN E FK++S+AYEVL +P +R +D+
Sbjct: 35 KNAGTEENFKEVSEAYEVLCDPQQRERFDK 64
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 239 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHP 334
E+ YY++LGV+ N TTD+ HP
Sbjct: 2 ESNYYEVLGVERNATTDDIRRAYRRLALKYHP 33
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 33.9 bits (74), Expect = 0.18
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +3
Query: 360 KFKQISQAYEVLSNPDKRRIYDQGGE 437
KF+ +S++Y +LS+ +KR IYD+ GE
Sbjct: 58 KFQALSKSYCILSDKEKRAIYDESGE 83
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 357 EKFKQISQAYEVLSNPDKRRIYDQG 431
E F++I++AY VL N + R+ YD+G
Sbjct: 112 EVFQEIAEAYSVLGNLESRKQYDRG 136
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 357 EKFKQISQAYEVLSNPDKRRIYDQG 431
E F++I++AY VL N + R+ YD+G
Sbjct: 112 EVFQEIAEAYSVLGNLESRKQYDRG 136
>SB_59661| Best HMM Match : PMP22_Claudin (HMM E-Value=0.26)
Length = 680
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -3
Query: 326 ILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCLSMFTIKCTNHKIKYRIGCY 159
+++L F RLSL+ W N + + KC++ L+ F C + I Y
Sbjct: 219 VVDLYFSRLSLLESWKNFILQSKCYHRLQVLVILMAEMAFYTFCVQGTLLPNIPLY 274
>SB_36131| Best HMM Match : His_leader (HMM E-Value=2.7e-10)
Length = 416
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Frame = -2
Query: 669 YHHVPHIS-----HRSRSFEASVF*LCHSTTPPMLLIIDELHLCLCVPCGVYLH*IHLQR 505
+HH P S H +S+ + H + +++II H P + IH
Sbjct: 89 HHHHPSSSSIIIIHHHHPSSSSIIIIHHHPSSSIIIIIHHHH-----PSSSSIIIIHHHH 143
Query: 504 TCQRDPLVKKIHHHYHPLPLMLVHHLDHKFAFCQDSRAPHRPEISV*ISHP 352
++ IHHH+HP +++ H H + H P S+ I HP
Sbjct: 144 PSSSSIII--IHHHHHPSSSIIIIHHHHPSSSSIIIIIHHHPS-SIIIHHP 191
Score = 29.1 bits (62), Expect = 5.0
Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 9/109 (8%)
Frame = -2
Query: 651 ISHRSRSFEASVF*LCH-----STTPPMLLIIDELHLCLCVPCGVYLH*IHLQRTCQRDP 487
I H +S+ + H S++ +++II H + +H H +
Sbjct: 248 IHHHHHPSSSSIIIIIHHHHHPSSSSSIIIIIHHHHHPSSSSSIIIIHHHHHPSSSSSII 307
Query: 486 LVKKIHHHYHPLP----LMLVHHLDHKFAFCQDSRAPHRPEISV*ISHP 352
++ IHHH+HP ++++HH H S H P + HP
Sbjct: 308 IIIIIHHHHHPSSSSSIIIIIHH--HHHPSSSSSIIHHHPSSIIIHHHP 354
>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
Length = 237
Score = 29.9 bits (64), Expect = 2.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 474 IHHHYHPLPLMLVHHLDH 421
+HHH+HPL + ++H H
Sbjct: 154 VHHHHHPLSIAIIHRHRH 171
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 573 LSVTLEELYCGTVRKLTLQKNVI 641
L V+LEELY G+VRKL + V+
Sbjct: 107 LPVSLEELYIGSVRKLRINHQVL 129
>SB_10713| Best HMM Match : Peptidase_C32 (HMM E-Value=3.3)
Length = 615
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = -3
Query: 338 VQGGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
++GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 559 LEGGPLKMALTKIEALYICCDIVDRTQCLSLGEPSNVLACL 599
>SB_39666| Best HMM Match : Fe-ADH (HMM E-Value=0.59)
Length = 483
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 323 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 64 LEVTLSKIEAIYIFCDIVDRTKCFALGEPSNVLACL 99
>SB_5262| Best HMM Match : IncA (HMM E-Value=2.1)
Length = 597
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = -3
Query: 338 VQGGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
++GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 279 LEGGPLKMALTKIEALYICCDIVDRTQCLSLGEPSNVLACL 319
>SB_31743| Best HMM Match : IncA (HMM E-Value=1.4)
Length = 330
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 323 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 64 LEVTLSKIEAIYVFCDIVDRTKCFALDEPSNVLACL 99
>SB_20223| Best HMM Match : IncA (HMM E-Value=1.4)
Length = 400
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 323 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 134 LEVTLSKIEAIYVFCDIVDRTKCFALDEPSNVLACL 169
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/22 (63%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = +3
Query: 339 KNPNEGE-KFKQISQAYEVLSN 401
+N E E KFK+IS+AYEVLS+
Sbjct: 37 QNKEEAERKFKEISEAYEVLSD 58
>SB_47226| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 323 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 64 LEVTLSKIEAIYIYCDIVDRTKCFALDEPSNVLACL 99
>SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056)
Length = 219
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 348 NEGEKFKQISQAYEVLSNPDKRRIYD 425
N +KF+ I+ AYE L +P++R YD
Sbjct: 78 NAIKKFQLIATAYETLKDPEQRNDYD 103
>SB_17511| Best HMM Match : Flagellin_IN (HMM E-Value=5.6)
Length = 265
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 323 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 102 LEVTLSKIEAIYIFCDIVDRTKCFALDEPSTVLACL 137
>SB_58552| Best HMM Match : UbiD (HMM E-Value=1.1)
Length = 409
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 323 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 133 LEVTLSKIEAIYIFCDIVDRTKCFALDEPSNVLACL 168
>SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 332 GGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 163 GGALKVALPKIEALYICCDIVDRTQCLSLGEPSNVLACL 201
>SB_8101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 338 VQGGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
V GG L++ ++ ++ +C++V R +C + P L CL
Sbjct: 128 VGGGALKVTLPKIEALYIFCDIVDRSQCLALDEPSNVLACL 168
>SB_2468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -2
Query: 732 VEFVLAYQSHGTLDKFELHPFYHHVPHISHRSRSFEASVF*LCHSTTPPM 583
V VLA + G +D F + F+ + + HRSRSF F C S PP+
Sbjct: 148 VNLVLA-EFKGCID-FRRYCFHRGIEYCQHRSRSFVFPPF--CFSCHPPL 193
>SB_45370| Best HMM Match : Flagellin_IN (HMM E-Value=6.9)
Length = 226
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 323 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 133 LEVTLSKMEAIYIFCDIVDRKKCFALDEPSNVLACL 168
>SB_25594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -3
Query: 332 GGILELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
GG L++ ++ ++ C++V R +C ++ P L CL
Sbjct: 319 GGALKVALPKIEALYICCDIVDRTQCLSLGEPSNVLACL 357
>SB_19157| Best HMM Match : FLO_LFY (HMM E-Value=0.27)
Length = 560
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 323 LELIFDRLSLIHQWCNLVSRPKCHNMWSP*PFLLCL 216
LE+ ++ I+ +C++V R KC + P L CL
Sbjct: 400 LEVTLSKIEAIYIFCDIVDRTKCFALDEPSNVLACL 435
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 363 FKQISQAYEVLSNPDKRRIY 422
F ++ +AYEVLS+P+ + IY
Sbjct: 202 FSKVQKAYEVLSDPETKAIY 221
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,018,240
Number of Sequences: 59808
Number of extensions: 399648
Number of successful extensions: 1048
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2538363813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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