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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_A03
         (877 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10931| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   2e-06
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.008
SB_39285| Best HMM Match : Proteasome (HMM E-Value=0)                  36   0.033
SB_48652| Best HMM Match : RVT_1 (HMM E-Value=0.0009)                  36   0.043
SB_50062| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.30 
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0)                       29   6.5  
SB_25693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)           29   6.5  
SB_56011| Best HMM Match : Exo_endo_phos (HMM E-Value=0.13)            28   8.6  
SB_55435| Best HMM Match : RVT_1 (HMM E-Value=7.9e-22)                 28   8.6  
SB_46984| Best HMM Match : Exo_endo_phos (HMM E-Value=4.2e-09)         28   8.6  
SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  
SB_43221| Best HMM Match : PHF5 (HMM E-Value=2)                        28   8.6  
SB_41253| Best HMM Match : Exo_endo_phos (HMM E-Value=4.5e-09)         28   8.6  
SB_29894| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  
SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17)                28   8.6  
SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  
SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)         28   8.6  
SB_9246| Best HMM Match : RHS_repeat (HMM E-Value=5.5e-06)             28   8.6  

>SB_10931| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 467

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
 Frame = +2

Query: 275 GTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCG--AGTAADTEMTTQ 448
           GTT +   +  GVI+  D+RAT  + ++ +  +K+  +  N Y  G  AG AAD     +
Sbjct: 28  GTTTLAFKFKHGVIVAVDSRATAGSYIASQTVKKV--IEINPYLLGTMAGGAADCSFWER 85

Query: 449 SVASQLELQRLHTGRTVPVETAATLLKRMLFRYQGHIGAALV 574
            +A Q  +  L     + V  A+ +L  M++ Y+G +G ++V
Sbjct: 86  LLAKQCRIYELRNKERISVAAASKILANMVYYYKG-MGLSMV 126



 Score = 38.3 bits (85), Expect = 0.008
 Identities = 23/69 (33%), Positives = 36/69 (52%)
 Frame = +2

Query: 533 MLFRYQGHIGAALVLGGVDRTGPHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAGWKRD 712
           M F +QG      ++ G D+ GP +Y +   G+       ++GSGS  A  V ++G+K D
Sbjct: 146 MFFTFQG-----TMICGWDKKGPGLYYVDSDGTRLSNQMFSVGSGSTYAYGVMDSGYKYD 200

Query: 713 MNEEEGKKL 739
           M+ EE   L
Sbjct: 201 MSPEEAYDL 209


>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1071

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +2

Query: 722 EEGKKLVRDAIAAGIFNDLG 781
           EE K+LVRD IAAGIFNDLG
Sbjct: 2   EEAKQLVRDGIAAGIFNDLG 21


>SB_39285| Best HMM Match : Proteasome (HMM E-Value=0)
          Length = 215

 Score = 36.3 bits (80), Expect = 0.033
 Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 6/155 (3%)
 Frame = +2

Query: 254 APKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADT 433
           A +A K G+T VG+   + V+LG + +A    +   +  +KI  L  ++    AG  AD 
Sbjct: 24  AQEAVKKGSTAVGVRGNNIVVLGVERKAVAK-LQEPRTVRKICTLDDHVLMAFAGLTADA 82

Query: 434 EMTTQSVASQLELQRLHTGRTVPVETAATLLKRMLFRY-----QGHIGAALVLGGVDRTG 598
            +       + +  +L     V +E     +  +  RY     +   G + ++ G D  G
Sbjct: 83  RILVNKARVECQSHKLTVEDPVTLEYITRFIATLKQRYTQSNGRRPFGISTLIVGFDFDG 142

Query: 599 -PHIYCIYPHGSVDKLPYATMGSGSLAAMAVFEAG 700
            P +Y   P G+         G G    +AV + G
Sbjct: 143 TPRLYQTDPSGTYHAWKVVQSG-GKNIELAVMKKG 176


>SB_48652| Best HMM Match : RVT_1 (HMM E-Value=0.0009)
          Length = 938

 Score = 35.9 bits (79), Expect = 0.043
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +2

Query: 266  TKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAAD 430
            T TGT+++GI +  GV++ ADT  +  ++   +N  ++  +  N     AG  AD
Sbjct: 872  TTTGTSVLGIKFNGGVLMAADTLGSYGSLARYRNISRLMRVNENTIIGAAGDYAD 926


>SB_50062| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 299

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +2

Query: 233 LAQKGFPAPKATKTGTTIVGIIYADGVILGADTRATENTVVSDKNCQ 373
           L + G P P  +  G   VG I A G +L + TRA     V++ NC+
Sbjct: 84  LKRLGIPPPLLSMGGAEFVGAIRARGGLLFSKTRAARGRQVANVNCE 130


>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1670

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +2

Query: 428 DTEMTTQSVASQLELQRLHT--GRTVPVETAATLLKRMLFRYQGH 556
           D +     V S  E+ RLHT  GR+ PVE    LLK+ L + + H
Sbjct: 250 DKKDEDSKVMSSQEVSRLHTPQGRSTPVEPHLQLLKQALKQVKPH 294


>SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4275

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = +2

Query: 95  RGITFKGVRFKLKFQ*NLSNHEMASALVPEIPVPGFSFENFQRNAFLAQKGFPAPKATKT 274
           +G+  KG    L++    SN E  + L   +P+   +FE FQRN F  QK    P     
Sbjct: 729 KGLKRKGSIVLLRYILQDSNFEDLAGLAL-LPLANNTFEVFQRNGFGFQKKVYMPSDQHP 787

Query: 275 GTTIVGI 295
           G+ + G+
Sbjct: 788 GSLLRGL 794


>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1681

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +2

Query: 407 CGAGTAADTEMTTQSVASQLELQR 478
           C  GTAA T +T QSVAS ++++R
Sbjct: 637 CKRGTAALTNVTKQSVASVVDIER 660


>SB_42160| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 1858

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781  TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
            T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 1016 TSLVDYVISSNRVQQK-FQFLKIHPLLPHISDHCH 1049


>SB_25693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)
          Length = 826

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781 TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
           T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 591 TSLVDYVISSNRVQQK-FQFLKIHPLLPHISDHCH 624


>SB_56011| Best HMM Match : Exo_endo_phos (HMM E-Value=0.13)
          Length = 307

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781 TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
           T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 195 TSLVDYVISSNRVRQK-FQFLKIHPLLPHISDHCH 228


>SB_55435| Best HMM Match : RVT_1 (HMM E-Value=7.9e-22)
          Length = 726

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781 TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
           T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 265 TSLVDYAISSNRVRQK-FQFLKIHPLLPHISDHCH 298


>SB_46984| Best HMM Match : Exo_endo_phos (HMM E-Value=4.2e-09)
          Length = 476

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781 TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
           T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 246 TSLVDYVISSNRVRQK-FQFLKIHPLLPHISDHCH 279


>SB_46241| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 625

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781 TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
           T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 451 TSLVDYVISSNRVRQK-FQFLKIHPLLPHISDHCH 484


>SB_43221| Best HMM Match : PHF5 (HMM E-Value=2)
          Length = 361

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781 TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
           T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 102 TSLVDYVISSNRVRQK-FQFLKIHPLLPHISDHCH 135


>SB_41253| Best HMM Match : Exo_endo_phos (HMM E-Value=4.5e-09)
          Length = 404

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781 TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
           T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 246 TSLVDYVISSNRVRQK-FQFLKIHPLLPHISDHCH 279


>SB_29894| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 838

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781 TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
           T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 246 TSLVDYVISSNRVRQK-FQFLKIHPLLPHISDHCH 279


>SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17)
          Length = 1178

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781  TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
            T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 960  TSLVDYVISSNRVRQK-FQFLKIHPLLPHISDHCH 993


>SB_40728| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1317

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781 TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
           T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 719 TSLVDYVISSNRVRQK-FQFLKIHPLLPHISDHCH 752


>SB_24634| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00054)
          Length = 1012

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781 TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
           T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 837 TSLVDYVISSNRVRQK-FQFLKIHPLLPHISDHCH 870


>SB_9246| Best HMM Match : RHS_repeat (HMM E-Value=5.5e-06)
          Length = 530

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 781 TQVIEYT-SSNSISDKLFSFFLIHITFPTCFKHCH 680
           T +++Y  SSN +  K F F  IH   P    HCH
Sbjct: 372 TSLVDYVISSNRVRQK-FQFLKIHPLLPHISDHCH 405


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,738,271
Number of Sequences: 59808
Number of extensions: 498372
Number of successful extensions: 1384
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2490695009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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