Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0017
(669 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011) 37 0.017
SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) 33 0.21
SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 31 1.1
SB_56258| Best HMM Match : MAPEG (HMM E-Value=0.86) 30 2.0
SB_41731| Best HMM Match : bZIP_1 (HMM E-Value=0.014) 30 2.0
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 29 2.6
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 2.6
SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 28 6.0
SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_24737| Best HMM Match : KID (HMM E-Value=0.096) 28 6.0
SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_20518| Best HMM Match : Alpha-2-MRAP_N (HMM E-Value=7.4) 28 6.0
SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1) 28 7.9
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 28 7.9
SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
Length = 299
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 317 IRSEQTNNFIVATKEALDAKMETXEEKREAYINELRSRLKDHLEGVEKTRLTLEQ 481
I EQ +E + KME +EKR++Y+ L++RL + VE+ R T+E+
Sbjct: 189 IAQEQIEQQSKLIEEKIMQKMEMTKEKRDSYMEALKTRLHEKSLDVEQKRQTMEE 243
>SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081)
Length = 524
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +2
Query: 389 EEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIKIR*PQLPTSGDENLKKMIE 568
++K + I E ++R H + +E+ R E++ EV + R L E+L+K E
Sbjct: 153 QQKEKERIEEEKNRAAAHQQELERKRKEREEKQQEVDE----REDHLQKKRSESLRK--E 206
Query: 569 RLREHEXQVSQGPRRQP 619
R++E E ++QG ++P
Sbjct: 207 RMKEAEALIAQGKEQKP 223
>SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 350 ATKEALDAKMETXEEKREAYINELRSRLKDHLEG-VEKTRLTLEQQTAEV 496
A ++AL+A +E R+ + ELR ++ + E +E+ R+ E+Q AE+
Sbjct: 52 AIRDALNAAEAKAQEDRKQALEELRKKMNEEREQCLEQARIRAEEQMAEI 101
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/105 (24%), Positives = 51/105 (48%)
Frame = +2
Query: 350 ATKEALDAKMETXEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIKIR*PQL 529
+ KE +M T +EK + + ++L+D L K++ Q+ +E Y+A+K ++
Sbjct: 423 SNKEKEYKRMATEQEKESKSLRKKNNQLEDELTNQGKSKEQEAQEHSEKYEALK---NEM 479
Query: 530 PTSGDENLKKMIERLREHEXQVSQGPRRQPGEVPAARERPSQEKL 664
G E LK+ E ++ E + + + EV R+ S++ L
Sbjct: 480 QQQGKEWLKQDKESHKQIEEREKE-CKSLRDEVRKLRDNLSKQDL 523
>SB_56258| Best HMM Match : MAPEG (HMM E-Value=0.86)
Length = 193
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -3
Query: 667 LQLLLGWPLSSCWNFSWLPARTLRNLXLMFAQTLDHLLEVLVAACRQLWSSYLDGLVHFR 488
+Q+ LG L WN +W R +R+ +F + H + A + YL L HF+
Sbjct: 126 MQITLGVSLCLLWNITWY-IRRVRDHIHVFPRRFSHSCPICTHAHANTHTIYL-FLTHFQ 183
Query: 487 GL 482
G+
Sbjct: 184 GI 185
>SB_41731| Best HMM Match : bZIP_1 (HMM E-Value=0.014)
Length = 289
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = +2
Query: 356 KEALDAKMETXEEKREAYINELR-SRLKDHLEGVEKTRLTLEQQTAEVYKAIKIR*PQLP 532
KE LD K T + K + E+ SR+++ LE +E + + + ++ +
Sbjct: 66 KEMLDLKPITAKIKAKLQEAEVEISRVQNSLEYLENQSRRNNIRVSGIPESPGESWDDVE 125
Query: 533 TSGDENLKKM----IERLREHEXQVSQGPRRQPGEVPAARERP 649
EN+K+ IE R H + GPRR+ G A+R++P
Sbjct: 126 AKVKENIKQALGLEIEIERAHRVERRPGPRRRDGGRDASRDQP 168
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/77 (25%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +2
Query: 359 EALDAKMETXEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKA---IKIR*PQL 529
EA+ +M E+K + ++ E ++ L++ L ++KT+ L Q+ E+++A I + ++
Sbjct: 2863 EAVKKEMVATEKKVKLFL-EKQNLLEEKLLLLQKTKEELRQKETELHEAREEITVLMNRI 2921
Query: 530 PTSGDENLKKMIERLRE 580
+S D+ +KK+++ + E
Sbjct: 2922 ESSKDKQIKKVMKAVCE 2938
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/80 (22%), Positives = 35/80 (43%)
Frame = +1
Query: 319 PQRADE*LHRRHQGGSRRQDGDPXGKTRGLHQRAALPSQGSS*GR*EDQVDPGTADRGSV 498
PQ ++ R Q + + P K ++A+ ++ S + +D+ D A R +
Sbjct: 556 PQDQEKQATRPRQASRKTKTSKPQDKQAARPKQASRKTKTSKTSKPQDKQDARPASRRTK 615
Query: 499 QGHQDKMTTAADKRRREPQE 558
QDK + + R+PQ+
Sbjct: 616 PQDQDKQDASRKTKTRKPQD 635
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Frame = +2
Query: 311 SRIRSEQTNNFIVATK-EALDAKMETXEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 487
SR+ SE + I K + +A +E ++K + INE R +L++ ++ ++ +
Sbjct: 1455 SRLNSELEDALIDLEKAQTNNANLEKKQKKIDIQINEWRVKLEEVQADLDNSQKEARNYS 1514
Query: 488 AEVYK---AIKIR*PQLPTSGDENLKKMIERLREHEXQVSQGPRRQPGEVPAARERPSQE 658
E+YK A + Q+ EN K + + + Q+ +G + E+ R+R E
Sbjct: 1515 TEMYKIKAAFDEQSEQVEALKREN-KSLASEVNDLADQLGEG-GKSVVELEKLRKRLEME 1572
Query: 659 K 661
K
Sbjct: 1573 K 1573
>SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 504
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 EVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKT--PSVEEIQEKLIAAEE 242
E E TE + ++ G + + LA +GV P ADS E+ P +EK E
Sbjct: 285 EEENSETEEQPRKPVGGPINFAAELASKIGVAPPPAADSDEEAAEPGAWSDEEKKPQQPE 344
Query: 243 RRRS 254
++RS
Sbjct: 345 KQRS 348
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = +1
Query: 286 EDGQDRGGVPHPQRADE*LHRRHQGGSRRQDGDPXGKTRGLHQRAALPSQGSS*GR*EDQ 465
+D D+GG ++ + R+Q RQD + + R Q P + S G D+
Sbjct: 994 KDRSDKGGDRLQEKPSQRKDERYQSDKGRQDRERPERDRRDRQEKERPYKQSGRGERNDR 1053
Query: 466 VDPGTADRGSV-QGHQDKMTTAADKRRREPQEDDRASA 576
DR + +D+ R+R+P + + +A
Sbjct: 1054 RGERYQDRREQREREEDREPRDGKGRQRQPSDSRKPNA 1091
>SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1090
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 69 EVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKT--PSVEEIQEKLIAAEE 242
E E TE + ++ G + + LA +GV P ADS E+ P +EK E
Sbjct: 149 EEENSETEEQPRKPVGGPINFAAELASKIGVAPPPAADSDEEAAEPGAWSDEEKKPQQPE 208
Query: 243 RRRS 254
++RS
Sbjct: 209 KQRS 212
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 28.3 bits (60), Expect = 6.0
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Frame = +2
Query: 356 KEALDAKMETXEEKREAYINELRSRLKDH--LEGV-EKTRLTLEQQTAEVYKAIKIR*PQ 526
K + ++ + K EL+S +K L+GV E+T+L + E+ K K Q
Sbjct: 2110 KNDMRIALQDSQNKLGGLEEELQSEMKQQAQLKGVLEQTKLRNDNLKEEILKLQKKLAEQ 2169
Query: 527 LPTSGDE-----NLKKMIERLREHEXQVSQGPRRQPGEVPAARERPSQEKLQ 667
D+ LK +IERLRE + E+ + R+ + L+
Sbjct: 2170 QKYHEDQIRDFPELKAVIERLREENENLENDNEMMKNELNSLRDEHERVSLE 2221
>SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 308 PPRSWPSSEQWRPSY 264
PP ++PSS+QW P+Y
Sbjct: 508 PPGAYPSSDQWIPAY 522
>SB_24737| Best HMM Match : KID (HMM E-Value=0.096)
Length = 636
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/94 (24%), Positives = 46/94 (48%)
Frame = +2
Query: 374 KMETXEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIKIR*PQLPTSGDENL 553
++++ E RE I++L LKD + + TLEQ A++ + ++ + GD N
Sbjct: 142 ELQSVIEDREKSIDKLEKELKDQEAKHNRQKNTLEQTVAKMKEVMERK------GGDAN- 194
Query: 554 KKMIERLREHEXQVSQGPRRQPGEVPAARERPSQ 655
K+ R+ E E ++ + + V A+ +R +
Sbjct: 195 -KVNARVAELEKELKEKTKSAEKLVKASEKREKE 227
>SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 482 QTAEVYKAIKIR*PQLPTSGDENLKKMIERLREH--EXQVSQGPRRQP 619
Q A Y + L + +ENLKK ++ R H + + SQ P+R P
Sbjct: 287 QMASEYAERDFKSSALSSGNNENLKKQEQQFRAHCKDPKRSQDPKRSP 334
>SB_20518| Best HMM Match : Alpha-2-MRAP_N (HMM E-Value=7.4)
Length = 494
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 443 LEGVEKTRLTLEQQTAEVYKA----IKIR*PQLPTSGDENLKKMIERLREHEXQVSQGPR 610
L G + + L++++ +++ + +R P + + +E K +E + Q PR
Sbjct: 53 LAGDPEDEILLKKKSLQIHAGNWATLLLRPPNVDQNLEEECKNELEEMDVPRPQPIHSPR 112
Query: 611 RQPGEVPAARERP 649
R P +V + RP
Sbjct: 113 RNPADVVPKKRRP 125
>SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1)
Length = 798
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 135 VILAEPVGVPVPRRADSPEKTPSVEEIQEKLIAAEERRRSWK 260
VI PV P PR KT +E L EER++ WK
Sbjct: 662 VIPEAPVFDPKPRTPTVSRKTSMKLTAEEHLQLEEERKKMWK 703
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +2
Query: 362 ALDAKMETXEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIKIR*PQLPTSG 541
A + K E+RE E R++ E E+ R EQ+ V + + P +
Sbjct: 499 AEEEKRRKETEERERQAREEEDRIRREREEAERLRREKEQREQLVPHSDALECAIKPLNL 558
Query: 542 DE---NLKKMIERLREHEXQVSQGPRRQPGEVPAARERPSQEKLQ 667
E +K+ E RE E ++ ++ E+ RE+ +EK Q
Sbjct: 559 LEARIKAQKLEEEQRELERLQAEAELKRKQELERLREKRKEEKAQ 603
>SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +2
Query: 329 QTNNFIVATKEALDAKMETXEEKREAYINELRSRLKDHLEGVEK--TRLTLEQQTAEVYK 502
QT I+ E ME + + E EL +L+ K T+L L Q+TAE YK
Sbjct: 401 QTQILILQVHEDYRKLMEQKQAEEERCRKELEEKLQTLERDSHKYRTKLELAQKTAETYK 460
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,459,737
Number of Sequences: 59808
Number of extensions: 320175
Number of successful extensions: 1270
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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