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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0002
         (847 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_24749| Best HMM Match : Adap_comp_sub (HMM E-Value=2.24208e-44)    181   7e-46
SB_19443| Best HMM Match : Adap_comp_sub (HMM E-Value=2.2e-20)         72   5e-13
SB_32450| Best HMM Match : No HMM Matches (HMM E-Value=.)              47   2e-05
SB_29556| Best HMM Match : Ion_trans (HMM E-Value=0)                   31   1.2  
SB_59294| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.20004e-41)    31   1.2  
SB_41497| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_26838| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0)                   28   8.3  
SB_24482| Best HMM Match : KID (HMM E-Value=0.045)                     28   8.3  

>SB_24749| Best HMM Match : Adap_comp_sub (HMM E-Value=2.24208e-44)
          Length = 331

 Score =  181 bits (440), Expect = 7e-46
 Identities = 83/120 (69%), Positives = 101/120 (84%)
 Frame = +1

Query: 256 HARQQVRSPVTNIARTSFFHIKRANIWLAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKIS 435
           HAR Q+RSPVTNIARTSFFHI++ N+W+AAVT+QNVNAAMVFEFL + +D+M SYFGK++
Sbjct: 38  HARGQIRSPVTNIARTSFFHIRQGNVWIAAVTRQNVNAAMVFEFLFRTVDIMMSYFGKVT 97

Query: 436 EENIKNNFVLIYELLDEILDFGYPRILILGS*RHSSLQQGIKSASKEEQAQITSQVTGQI 615
           EE IKNNFVLIYELLDEI D+GYP+       +    QQG+K+ ++EEQAQITSQVTGQI
Sbjct: 98  EEGIKNNFVLIYELLDEIADYGYPQKTDTAILKTFITQQGVKTQTREEQAQITSQVTGQI 157



 Score = 74.9 bits (176), Expect = 7e-14
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = +2

Query: 146 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNV 253
           MIGG F+YNHKGEVLISRVYRDDIGRN VDAFRVNV
Sbjct: 1   MIGGFFIYNHKGEVLISRVYRDDIGRNTVDAFRVNV 36



 Score = 37.9 bits (84), Expect = 0.010
 Identities = 23/59 (38%), Positives = 34/59 (57%)
 Frame = +2

Query: 611 RLXWRREGIKYRRNELFP*CTXVCQLXDVTARSKCSLXHVGWEKWVMKVIIVPGLPECQ 787
           ++ WRR+GIKYRRNELF        L  ++ + +    HV   + VMK  +  G+PEC+
Sbjct: 156 QIGWRRDGIKYRRNELFLDVLESVNLL-MSPQGQVLSAHVS-GRVVMKSFL-SGMPECK 211


>SB_19443| Best HMM Match : Adap_comp_sub (HMM E-Value=2.2e-20)
          Length = 216

 Score = 72.1 bits (169), Expect = 5e-13
 Identities = 28/58 (48%), Positives = 45/58 (77%)
 Frame = +1

Query: 337 LAAVTKQNVNAAMVFEFLLKIIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPR 510
           +   TK+N N A++F FL +++ V   YF ++ EE+I++NFV+IYEL+DE++DFGYP+
Sbjct: 12  VVCTTKKNANVALIFVFLHRMVHVFIDYFKELEEESIRDNFVIIYELMDELVDFGYPQ 69


>SB_32450| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 570

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 21/36 (58%), Positives = 27/36 (75%)
 Frame = +1

Query: 397 IIDVMQSYFGKISEENIKNNFVLIYELLDEILDFGY 504
           + ++ + Y G I+EE IK N  LIYELLDE+LDFGY
Sbjct: 18  VCNLCKDYCGIINEEAIKCNLPLIYELLDEVLDFGY 53


>SB_29556| Best HMM Match : Ion_trans (HMM E-Value=0)
          Length = 712

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
 Frame = +1

Query: 346 VTKQNVNAAMVFEFLLKIIDVMQSY--FGKISE-ENIKNNFVLIYELLDEILDFGYPRIL 516
           VT +  N   V  F+L++I  + S+   G +S+ +NI + FV++  + + +L+ GY R+ 
Sbjct: 227 VTLEKTNIVFVTIFVLEMIINVISFGIMGYLSQLQNIFDGFVVVLSVTELLLENGYARLS 286

Query: 517 ILGS*R 534
           +  S R
Sbjct: 287 VFRSIR 292


>SB_59294| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.20004e-41)
          Length = 851

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = -2

Query: 522 QYQNSRVTKVQDLIKQLIDQNKVILDVLFRN 430
           Q++N+ V + QDLIKQL ++ ++ L V F N
Sbjct: 135 QHENTEVLRCQDLIKQLAEKYELPLKVGFNN 165


>SB_41497| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 792

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -2

Query: 429 LAKIRLHHINDLQQEL-KYHGRVHILLCDCCQ 337
           +A+I+ + I D Q++  KY G  H+L+ DCC+
Sbjct: 732 IARIKRYAIQDRQKDRPKYTGFHHMLMYDCCR 763


>SB_26838| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 325

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -2

Query: 429 LAKIRLHHINDLQQEL-KYHGRVHILLCDCCQ 337
           +A+I+ + I D Q++  KY G  H+L+ DCC+
Sbjct: 280 IARIKRYAIQDRQKDRPKYTGFHHMLMYDCCR 311


>SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0)
          Length = 1457

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
 Frame = +1

Query: 346 VTKQNVNAAMVFEFLLKIIDVMQSY--FGKISE-ENIKNNFVLIYELLDEILDFGYPRIL 516
           VT +  N   V  F+L++I  + S+   G +S+ +NI + FV+   + + +L+ GY R+ 
Sbjct: 484 VTLEKTNIVFVTIFVLEMIINVISFGIMGYLSQLQNIFDGFVVGLSVTELLLENGYARLS 543

Query: 517 ILGS*R 534
           +  S R
Sbjct: 544 VFRSIR 549


>SB_24482| Best HMM Match : KID (HMM E-Value=0.045)
          Length = 1714

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/34 (44%), Positives = 26/34 (76%), Gaps = 2/34 (5%)
 Frame = -2

Query: 513  NSRVTKVQDLIKQLIDQNKVI-LDVL-FRNLAKI 418
            NS++ +V++ +K +ID+NKV  ++VL  R LAK+
Sbjct: 1307 NSQLMEVRNKLKGVIDENKVFRMEVLRLRQLAKV 1340


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,615,068
Number of Sequences: 59808
Number of extensions: 552168
Number of successful extensions: 2033
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2026
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2395401800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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