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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20029
         (681 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_3102| Best HMM Match : TehB (HMM E-Value=8.1)                       65   6e-11
SB_2673| Best HMM Match : UPF0154 (HMM E-Value=1.9)                    59   4e-09
SB_47292| Best HMM Match : DUF1187 (HMM E-Value=2.9)                   38   0.006
SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12)                     38   0.010
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)                  29   2.6  
SB_12486| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=2.9)             29   3.5  
SB_25366| Best HMM Match : Tctex-1 (HMM E-Value=2.6e-08)               28   6.1  
SB_21466| Best HMM Match : Xlink (HMM E-Value=1.2)                     28   8.0  

>SB_3102| Best HMM Match : TehB (HMM E-Value=8.1)
          Length = 168

 Score = 64.9 bits (151), Expect = 6e-11
 Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
 Frame = +3

Query: 279 CLVPSNYLIWEATRPLANCAYCENVTKPIVLYNVTRHEF-NKYAYSTGPIIVKNAIKSWR 455
           CL P    + +  RP  +C+ C ++ K   + N+T  EF  KYAYS  P+++++ +K+W 
Sbjct: 47  CLFPIPEFVLDRFRPPIDCSICRDIHKVERVSNITPQEFAKKYAYSARPVVIEDGMKNWT 106

Query: 456 ATKEFNYKMFKRLYEETGVAMRA 524
           A++ F++  FK++Y     A+++
Sbjct: 107 ASEHFSFDFFKKVYSPDSPALKS 129



 Score = 35.9 bits (79), Expect = 0.030
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = +2

Query: 503 DWGSYESLDDGCQFLNFKTDLFSLKEVFNMPEERVKNEPGQKPW 634
           D  + +S D  CQF  + T   +LKEVF MPE+  + +   KPW
Sbjct: 123 DSPALKSRDGQCQFFPYNTKFSTLKEVFQMPEKDAQMK--GKPW 164


>SB_2673| Best HMM Match : UPF0154 (HMM E-Value=1.9)
          Length = 322

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
 Frame = +3

Query: 279 CLVPSNYLIWEATRPLANCAY-CENVTKPIVLYNVTRHEF-NKYAYSTGPIIVKNAIKSW 452
           CLV  N L  E TR  ++CA  CE +     +  +TR EF  KYAY   P++V +A ++W
Sbjct: 84  CLVEVNELFGEMTRKPSDCAMMCEGLEAVPKVSGLTREEFIEKYAYKGRPVVVTDAAQNW 143

Query: 453 RATKEFNYKMFKRLYEET 506
            A   FN+   K+LY+ +
Sbjct: 144 SALDTFNFTFLKKLYDSS 161



 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = +2

Query: 512 SYESLDDGCQFLNFKTDLFSLKEVFNMPEERV--KNEPGQKPWGNC 643
           SY+  ++ CQF  +KT+  +LK+ F+MP+ER   K +P    W NC
Sbjct: 164 SYKITEEECQFFPYKTEFLTLKDAFHMPKERAEFKGKPWYIGWSNC 209


>SB_47292| Best HMM Match : DUF1187 (HMM E-Value=2.9)
          Length = 238

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 14/57 (24%), Positives = 30/57 (52%)
 Frame = +3

Query: 342 CENVTKPIVLYNVTRHEFNKYAYSTGPIIVKNAIKSWRATKEFNYKMFKRLYEETGV 512
           C+ +    V+     +E + + +S  P+I+ +A   W+A K+F+ +   +LY E  +
Sbjct: 128 CKELKTIGVIEKTDANEMSDFLFSETPVIINDATDDWQARKDFSIEFLAKLYSENSI 184


>SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12)
          Length = 672

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +3

Query: 321 PLANCAYCENVTKPIVLYNVTRHEF-NKYAYSTGPIIVKNAIKSWRATKEFNYKMFKRLY 497
           PL   A CE +  P      ++ EF NKY + + P+I+ +AIK W A +++  +  +  Y
Sbjct: 292 PLEIGAMCERIAMP------SQEEFLNKYLFRSKPVIITDAIKHWPAIQKWTNEFLRAKY 345

Query: 498 EET 506
             T
Sbjct: 346 SNT 348


>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
          Length = 651

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 324 LANCAYCENVTKPIVLYNVTRHEFNKYAYSTGPIIVKNA 440
           L +   CE V   +V+  V R EF+   YST   IVK A
Sbjct: 507 LVDACECERVVVHLVVEGVLREEFHFTPYSTISYIVKGA 545


>SB_12486| Best HMM Match : 7TMR-DISM_7TM (HMM E-Value=2.9)
          Length = 492

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
 Frame = -2

Query: 506 SLFIQSFKHLIIKFFGCSPAFYGIFNYDWSG*ICILIKFMSSYI-I*HYGFSYIFTIGTI 330
           ++  + F+++   FF C+P F+ +F   +S  +C+   F   Y  +  Y +  +F + T 
Sbjct: 41  AMITRCFRYVYPVFFVCNPVFFAMFTRCFS--LCLPGVFRYDYTGVFRYVYP-VFLLFTR 97

Query: 329 C*WSSCLP 306
           C +S CLP
Sbjct: 98  C-FSLCLP 104


>SB_25366| Best HMM Match : Tctex-1 (HMM E-Value=2.6e-08)
          Length = 556

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +3

Query: 393 FNKYAYSTGPIIVKNAIKSWRATKEFNYKMFKRLYEE 503
           + ++     P+I++NAI  W A K +N +  K+   E
Sbjct: 40  YREWVAPNRPVIIRNAINHWPALKLWNSQYLKKCIGE 76


>SB_21466| Best HMM Match : Xlink (HMM E-Value=1.2)
          Length = 347

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +2

Query: 518 ESL-DDGC--QFLNFKTDLFSLKEVFNMPEE 601
           ESL DD C  +F   K DL+ LKE  N P++
Sbjct: 50  ESLTDDECLSEFRFIKNDLYRLKEALNFPDQ 80


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,533,709
Number of Sequences: 59808
Number of extensions: 309006
Number of successful extensions: 813
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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