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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20018
         (606 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             183   9e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              183   9e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         183   9e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      183   9e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              183   9e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             108   4e-24
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)              96   2e-20
SB_54| Best HMM Match : Actin (HMM E-Value=0)                          80   1e-15
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)                     64   1e-10
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)             62   4e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)                  60   2e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  56   2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)               56   2e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)                 51   6e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   4e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.003
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)                 39   0.004
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)                  37   0.011
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)                      33   0.14 
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.18 
SB_21074| Best HMM Match : NadA (HMM E-Value=2)                        33   0.18 
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)                    33   0.18 
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.18 
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)                       33   0.18 
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.18 
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)                    33   0.24 
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.55 
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)                    31   0.55 
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)                    31   0.72 
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)              31   0.72 
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.72 
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.72 
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)                   31   0.72 
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)                 31   0.72 
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)                 31   0.72 
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)              31   0.72 
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)                    29   2.2  
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)                       29   2.2  
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)                    29   2.2  
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)                   29   2.2  
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)                       29   2.2  
SB_42341| Best HMM Match : DUF701 (HMM E-Value=3)                      29   2.9  
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)                       29   3.9  
SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)                       28   5.1  
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)                 28   5.1  
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)                 28   5.1  
SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0)                       28   5.1  
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.1  
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)             28   6.7  
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.9  
SB_28762| Best HMM Match : RVT_1 (HMM E-Value=3.9e-23)                 27   8.9  

>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  183 bits (446), Expect = 9e-47
 Identities = 83/91 (91%), Positives = 86/91 (94%)
 Frame = +1

Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
           G +  +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49  GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108

Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
           APLNPKANRE MTQIMF TFN+PAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQA 139



 Score =  109 bits (263), Expect = 1e-24
 Identities = 50/53 (94%), Positives = 52/53 (98%)
 Frame = +2

Query: 95  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
           M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1   MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53



 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +3

Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
           +VLSLYASGR TGIV+DSGDGV+HTVPIYEGYA
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  183 bits (446), Expect = 9e-47
 Identities = 83/91 (91%), Positives = 86/91 (94%)
 Frame = +1

Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
           G +  +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48  GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107

Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
           APLNPKANRE MTQIMF TFN+PAMYVAIQA
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQA 138



 Score =  107 bits (256), Expect = 9e-24
 Identities = 48/51 (94%), Positives = 51/51 (100%)
 Frame = +2

Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
           +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2   EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52



 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +3

Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
           +VLSLYASGR TGIV+DSGDGV+HTVPIYEGYA
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 170


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  183 bits (446), Expect = 9e-47
 Identities = 83/91 (91%), Positives = 86/91 (94%)
 Frame = +1

Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
           G +  +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48  GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107

Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
           APLNPKANRE MTQIMF TFN+PAMYVAIQA
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQA 138



 Score =  108 bits (259), Expect = 4e-24
 Identities = 49/51 (96%), Positives = 51/51 (100%)
 Frame = +2

Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
           ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2   EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52



 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +3

Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
           +VLSLYASGR TGIV+DSGDGV+HTVPIYEGYA
Sbjct: 138 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 170


>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  183 bits (446), Expect = 9e-47
 Identities = 83/91 (91%), Positives = 86/91 (94%)
 Frame = +1

Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
           G +  +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49  GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108

Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
           APLNPKANRE MTQIMF TFN+PAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQA 139



 Score =  114 bits (274), Expect = 6e-26
 Identities = 51/53 (96%), Positives = 53/53 (100%)
 Frame = +2

Query: 95  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53



 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +3

Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
           +VLSLYASGR TGIV+DSGDGV+HTVPIYEGYA
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  183 bits (446), Expect = 9e-47
 Identities = 83/91 (91%), Positives = 86/91 (94%)
 Frame = +1

Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
           G +  +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49  GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108

Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
           APLNPKANRE MTQIMF TFN+PAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQA 139



 Score =  109 bits (263), Expect = 1e-24
 Identities = 48/53 (90%), Positives = 52/53 (98%)
 Frame = +2

Query: 95  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
           M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1   MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53



 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 29/35 (82%), Positives = 32/35 (91%), Gaps = 2/35 (5%)
 Frame = +3

Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYE--GYA 605
           +VLSLYASGR TGIV+DSGDGVSHTVPIYE  GY+
Sbjct: 139 AVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  108 bits (259), Expect = 4e-24
 Identities = 48/51 (94%), Positives = 51/51 (100%)
 Frame = +2

Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
           D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2   DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52



 Score = 78.6 bits (185), Expect = 4e-15
 Identities = 35/43 (81%), Positives = 37/43 (86%)
 Frame = +1

Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 366
           G +  +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI   TF
Sbjct: 48  GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90



 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 29/33 (87%), Positives = 32/33 (96%)
 Frame = +3

Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
           +VLSLYASGR TGIV+DSGDGV+HTVPIYEGYA
Sbjct: 101 AVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 133



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 439 NREXMTQIMFXTFNTPAMYVAIQA 510
           N + M +IMF TFN+PAMYVAIQA
Sbjct: 78  NWDDMEKIMFETFNSPAMYVAIQA 101


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score = 95.9 bits (228), Expect = 2e-20
 Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = +1

Query: 217 SGRDGRYGTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 393
           S + G    + L VGDEA   R +L + YP+++GIV NWDDM+ +W +TF  +++ + P 
Sbjct: 44  SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103

Query: 394 EHPVLLTEAPLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
              VLLTE PLNP  NRE M ++MF  +    +Y+AIQA
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQA 142



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 21/33 (63%), Positives = 28/33 (84%)
 Frame = +3

Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
           +VL+LYA G  TG+V+DSGDGV+H  P+YEG+A
Sbjct: 142 AVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFA 174



 Score = 44.4 bits (100), Expect = 7e-05
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = +2

Query: 113 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 211
           + +V DNG+G  K G+AG + P  +FPS+VGRP
Sbjct: 7   SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 36/55 (65%), Positives = 43/55 (78%)
 Frame = +1

Query: 346  KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
            K+W H F ++LRV  E+ PVLLTEAPLNPK NRE M Q+MF +FN P MYVA+QA
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQA 2183



 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = +2

Query: 119  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 220
            +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = +3

Query: 507  SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGY 602
            +V++LYASGR TG V D GDGVSHTVP+Y+GY
Sbjct: 2183 AVMALYASGRTTGTVFDCGDGVSHTVPVYDGY 2214


>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
          Length = 152

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = +3

Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
           +VLSLYASGR TG+V DSGDGVSH VPIYEGYA
Sbjct: 17  AVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYA 49



 Score = 31.1 bits (67), Expect = 0.72
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +1

Query: 460 IMFXTFNTPAMYVAIQA 510
           IMF  FN+PA+YVAIQA
Sbjct: 1   IMFEAFNSPAVYVAIQA 17


>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
          Length = 367

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = +3

Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
           +VLSLYA+GR TG+VLD+GDGVSH+VPIYEG+A
Sbjct: 164 AVLSLYATGRTTGVVLDAGDGVSHSVPIYEGFA 196



 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = +1

Query: 394 EHPVLLTEAPLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
           +HPVLLTEAPLNP+ NRE   ++ F TFN PA+++++QA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQA 164


>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
          Length = 1392

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = +2

Query: 104  EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 220
            E    LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 22/65 (33%), Positives = 40/65 (61%)
 Frame = +1

Query: 304 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQIMFXTFNT 483
           PI+ G++ +WD  EKI  + +   ++     HP+L++EA  N +  RE +T++MF  +N 
Sbjct: 3   PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62

Query: 484 PAMYV 498
           PA ++
Sbjct: 63  PAFFL 67



 Score = 38.3 bits (85), Expect = 0.005
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = +3

Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGY 602
           SVL+ +A+GR  G+V+DSG   +  VP+++GY
Sbjct: 71  SVLTAFANGRSNGLVIDSGATQTSAVPVHDGY 102


>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
          Length = 372

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = +1

Query: 220 GRDGRYGTEGL--FVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 393
           GR  + G E L  F+GDEA  K    T K+PI H IV +WD ME+ W    +  LR  PE
Sbjct: 273 GRSAK-GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPE 330

Query: 394 EHPVLL 411
           +H  LL
Sbjct: 331 DHYFLL 336



 Score = 32.3 bits (70), Expect = 0.31
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 540 TGIVLDSGDGVSHTVPI 590
           TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372


>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
          Length = 921

 Score = 51.2 bits (117), Expect = 6e-07
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +2

Query: 89  FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 235
           FK+      A+V+DNG G+ K GFAGD  PR + P++VG P+   +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741



 Score = 32.7 bits (71), Expect = 0.24
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 513 LSLYASGRXTGIVLDSGDGVSHTVPIYEGY 602
           LSLYASG   G+ L SG   +    IYEG+
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEGH 799


>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 198

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = -3

Query: 217 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 101
           MA  + D GE+G+ SI+S ETGLAHTGAI+  Q  +  V
Sbjct: 1   MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39


>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +1

Query: 220 GRDGRYGTEGLFVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 390
           GR G   + GL VG++  S   I   L+ P +  +VT+++  E++  H F +     P  
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164

Query: 391 EEHPVLLTEAPLNPKANRE 447
             HPV++TE   NP   R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183


>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
          Length = 543

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = +3

Query: 540 TGIVLDSGDGVSHTVPIYEGY 602
           TG V+DSGDGV+H +P+ EGY
Sbjct: 62  TGCVIDSGDGVTHVIPVAEGY 82


>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
          Length = 580

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +1

Query: 250 LFVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 375
           LF+GD+ +  +    L Y  P + G + NWD  ++IW +TF  E
Sbjct: 272 LFIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +2

Query: 107 EVAALVVDNGSGMCKAGFAGDDAPRAV 187
           ++A LV+D G+   K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258


>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
          Length = 272

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259


>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 591

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454


>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
          Length = 358

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317


>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
          Length = 339

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295


>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 181

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 91  LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137


>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 402

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 91  LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137


>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 458

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171


>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
          Length = 570

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ ++LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219


>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 120

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
          Length = 170

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
          Length = 419

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288


>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
          Length = 330

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149


>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2396

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -3

Query: 283  LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
            L C    +++ ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687


>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 859

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715


>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
          Length = 329

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270


>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
          Length = 1492

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -3

Query: 283  LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
            L C    +++ ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125


>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
          Length = 452

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 22  LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68


>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
          Length = 330

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C    +++ ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149


>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -1

Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
           GNT R    PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563


>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
          Length = 209

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
           L C    +++ V+LSH + H L A       +HG R+  SCET L    H  A +  + G
Sbjct: 93  LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151

Query: 112 NFFVAHLE 89
              V  L+
Sbjct: 152 QVDVLLLD 159


>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 522

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
           L C    +++ V+LSH + H L A       +HG R+  SCET L    H  A +  + G
Sbjct: 93  LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151

Query: 112 NFFVAHLE 89
              V  L+
Sbjct: 152 QVDVLLLD 159


>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
          Length = 221

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
           L C    +++ V+LSH + H L A       +HG R+  SCET L    H  A +  + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184

Query: 112 NFFVAHLE 89
              V  L+
Sbjct: 185 QVDVLLLD 192


>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
          Length = 224

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
           L C    +++ V+LSH + H L A       +HG R+  SCET L    H  A +  + G
Sbjct: 43  LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101

Query: 112 NFFVAHLE 89
              V  L+
Sbjct: 102 QVDVLLLD 109


>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1676

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
           L C    +++ V+LSH + H L A       +HG R+  SCET L    H  A +  + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773

Query: 112 NFFVAHLE 89
              V  L+
Sbjct: 774 QVDVLLLD 781


>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 1176

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 113
           L C    +++ V+LSH + H L A       +HG R+  SCET L    H  A +  + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857

Query: 112 NFFVAHLE 89
              V  L+
Sbjct: 858 QVDVLLLD 865


>SB_42341| Best HMM Match : DUF701 (HMM E-Value=3)
          Length = 651

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 19/80 (23%), Positives = 32/80 (40%)
 Frame = +1

Query: 325 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQIMFXTFNTPAMYVAI 504
           TN+ +   +W H    +    P    V L +  + P  N E + ++        A+ V  
Sbjct: 496 TNFSESRCVWLHKEEQQTTHRPSRQVVTLVDYAVCPFVNHEVLVKVHLLFEERCAVLVG- 554

Query: 505 QACSRCTRPVVXPVSCWTPA 564
            +C R  RP   P+   +PA
Sbjct: 555 GSCRRGCRPRRAPLVALSPA 574


>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 885

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = -3

Query: 265 HLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
           H++ + ++SH +HH ++      + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503


>SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 245

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
           L C    +++ ++LSH + H        D  +HG RS  SCET L
Sbjct: 129 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 172


>SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 931

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
           L C    +++ ++LSH + H        D  +HG RS  SCET L
Sbjct: 470 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 513


>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
          Length = 186

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
 Frame = -2

Query: 398 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASS--PTKSPSVPYRPS 225
           CS       +  + C    +  ++V   CS   + V +  ++C+    P +       PS
Sbjct: 88  CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147

Query: 224 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 132
           R D   FP +   R   HH+L +   + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178


>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
          Length = 892

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = -3

Query: 277 CSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNF 107
           C    +++ V+LSH + H L A       +HG R+  SCET L    H  A +  + G  
Sbjct: 465 CLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQV 523

Query: 106 FVAHLE 89
            V  L+
Sbjct: 524 DVLLLD 529


>SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 411

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
           L C    +++ ++LSH + H        D  +HG RS  SCET L
Sbjct: 78  LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 121


>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
           GNT R     AKPAL++P P S T
Sbjct: 40  GNTNRRTRIQAKPALNLPSPPSKT 63


>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 635

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 192 GNTARGASSPAKPALHIPEPLSTT 121
           GNT R    PAKP L IP P + T
Sbjct: 68  GNTNRRTRIPAKPTLTIPSPPTKT 91


>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2529

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 283  LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
            L C    +++ ++LSH + H        D  +HG RS  SCET L
Sbjct: 1196 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1239


>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2124

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 283  LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
            L C    +++ ++LSH + H        D  +HG RS  SCET L
Sbjct: 1860 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1903


>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 788

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
           L C    +++ ++LSH + H        D  +HG RS  SCET L
Sbjct: 180 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 223


>SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 217

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
           L C    +++ ++LSH + H        D  +HG RS  SCET L
Sbjct: 70  LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 113


>SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 295

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
           L C    +++ ++LSH + H        D  +HG RS  SCET L
Sbjct: 148 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 191


>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 888

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
           L C    +++ ++LSH + H        D  +HG RS  SCET L
Sbjct: 209 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 252


>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3142

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -3

Query: 283 LFCSVPHLLQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 140
           L C     ++ ++LSH + H L         +HG R  +SCET L  T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900


>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
          Length = 362

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 317 PCSMGYLRVRIPLLLCASSPTKSPSVPY 234
           P ++ +L    PLL+  +SP  SP++P+
Sbjct: 16  PPTIPFLAATTPLLMVTTSPLTSPTIPF 43



 Score = 27.9 bits (59), Expect = 6.7
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 317 PCSMGYLRVRIPLLLCASSPTKSPSVPY 234
           P ++ +L    PLL+  +SP  SP++P+
Sbjct: 82  PPTIPFLATTTPLLMVTTSPLPSPTIPF 109


>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 285

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 207 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 97
           L  IE +    A++P  P + +P+ +   +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258


>SB_28762| Best HMM Match : RVT_1 (HMM E-Value=3.9e-23)
          Length = 409

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 259 LQRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 149
           ++ ++LSH + H L A       +HG RS  SCET L
Sbjct: 1   MEHIVLSHLNKH-LSAFNILSEMQHGFRSGFSCETQL 36


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,221,024
Number of Sequences: 59808
Number of extensions: 456872
Number of successful extensions: 1455
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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