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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20015
         (619 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)            33   0.25 
SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89)                   31   0.99 
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.99 
SB_4837| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.7  
SB_20482| Best HMM Match : p450 (HMM E-Value=4.6e-28)                  29   2.3  
SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076)              29   4.0  

>SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)
          Length = 872

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +3

Query: 342 GSVYTAANSA-GFYGSGNY-----DLSNLRGRNFQEGTYLDNAHS 458
           G +YT  N A G+Y  GNY     D SN  G N+  G Y D  ++
Sbjct: 214 GGIYTDGNYADGYYAGGNYADGNHDDSNYAGGNYTGGNYADGNYT 258



 Score = 32.3 bits (70), Expect = 0.32
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 351 YTAANSAG-FYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           Y   N AG +Y SGNY   N  G N+ +G Y D  ++
Sbjct: 442 YADGNYAGGYYASGNYADGNYAGGNYADGNYEDGNYA 478



 Score = 31.9 bits (69), Expect = 0.43
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 342 GSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           G  Y   N   G+Y  GNY   N  G N+ +G Y D  ++
Sbjct: 274 GGNYADGNHTDGYYADGNYTDGNYTGGNYADGNYADGYYA 313



 Score = 31.9 bits (69), Expect = 0.43
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 351 YTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           YT  N A G Y  GNY   N  G N+ +G Y D  ++
Sbjct: 722 YTGGNYADGNYADGNYADGNYAGGNYADGNYADGNYA 758



 Score = 31.5 bits (68), Expect = 0.57
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 342 GSVYTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           G  Y   N AG  Y  GNY   N  G N+ +G Y D  ++
Sbjct: 544 GGNYAGGNYAGGNYADGNYTGGNYAGGNYADGNYADGNYT 583



 Score = 31.1 bits (67), Expect = 0.75
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +3

Query: 342 GSVYTAANSAG-FYGSGNYDLSNLRGRNFQEGTY 440
           G  Y   N AG +Y  GNY   N  G N+ +G Y
Sbjct: 479 GGYYADGNYAGGYYAGGNYADGNYAGGNYADGNY 512



 Score = 30.7 bits (66), Expect = 0.99
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 351 YTAANSAGF-YGSGNYDLSNLRGRNFQEGTY 440
           YT  N AG  Y  GNY   N  G N+++G Y
Sbjct: 562 YTGGNYAGGNYADGNYADGNYTGGNYEDGNY 592



 Score = 30.7 bits (66), Expect = 0.99
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = +3

Query: 339 TGSVYTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAH 455
           TG  Y   N AG  Y  GNY   N  G  +  G Y D  H
Sbjct: 678 TGGNYAGGNYAGGNYADGNYTGGNYAGGYYAGGNYADGNH 717



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
 Frame = +3

Query: 342 GSVYTAANSA-GFYGSGNY-----DLSNLRGRNFQEGTYLDNAHS 458
           G  YT  N A G+Y  GNY     D SN  G N+  G Y D  ++
Sbjct: 68  GGNYTDGNYADGYYAGGNYADGNHDDSNYAGGNYTGGNYADGNYT 112



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +3

Query: 342 GSVYTAANSAG-FYGSGNYDLSNLRGRNFQEGTY 440
           G  Y   N AG +Y  GNY   N  G N+ +G Y
Sbjct: 594 GGNYADGNYAGGYYAGGNYADGNYAGGNYADGNY 627



 Score = 30.3 bits (65), Expect = 1.3
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = +3

Query: 342 GSVYTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAH 455
           G  Y   N AG  Y  GNY   N    N+ +G Y D  H
Sbjct: 764 GGNYAGGNYAGGNYAGGNYAGGNYADGNYADGNYADGNH 802



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 351 YTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           Y   N AG  Y  GNY   N  G N+ +G Y D  ++
Sbjct: 762 YAGGNYAGGNYAGGNYAGGNYAGGNYADGNYADGNYA 798



 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +3

Query: 342 GSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTY 440
           G  Y   N A G Y  GNY   N  G N+ +G Y
Sbjct: 489 GGYYAGGNYADGNYAGGNYADGNYAGGNYADGNY 522



 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +3

Query: 339 TGSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           TG  Y   N A G Y  GNY   N    N+  G Y D  ++
Sbjct: 563 TGGNYAGGNYADGNYADGNYTGGNYEDGNYAGGNYADGNYA 603



 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = +3

Query: 342 GSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTY 440
           G  Y   N A G Y  GNY   N  G N+ +G Y
Sbjct: 604 GGYYAGGNYADGNYAGGNYADGNYAGGNYADGNY 637



 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +3

Query: 339 TGSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           TG  Y   N A G Y  GNY   N    N+ +G Y D  ++
Sbjct: 723 TGGNYADGNYADGNYADGNYAGGNYADGNYADGNYADGNYA 763



 Score = 28.7 bits (61), Expect = 4.0
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 342 GSVYTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           G  Y   N AG  Y  GN+   N  G N+ +G Y D  ++
Sbjct: 118 GGYYADGNYAGGNYADGNHIDGNYTGGNYADGNYADGNYT 157



 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 342 GSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           G+     N+ G Y  GNY   N  G N+  G Y D  ++
Sbjct: 355 GNYADGNNADGNYAGGNYAGGNYAGGNYAGGYYADGYYT 393



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +3

Query: 342 GSVYTAANSAG-FYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           G  Y   N AG +Y  GNY   N  G N+    Y D  ++
Sbjct: 163 GGYYADGNYAGGYYADGNYIDGNYTGGNYAGCNYADGYYA 202



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 372 GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           G+Y  GNY   N  G N+  G Y D  ++
Sbjct: 390 GYYTDGNYTDGNYAGGNYAGGYYADGNYA 418



 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +3

Query: 351 YTAANSAG-FYGSGNYDLSNLRGRNFQEGTY 440
           Y   N AG +Y  GNY   N  G N+  G Y
Sbjct: 522 YAGGNYAGGYYTDGNYTDGNYAGGNYAGGNY 552



 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +3

Query: 339 TGSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           TG  Y   N A G+Y  GNY   N     + +G Y D  ++
Sbjct: 298 TGGNYADGNYADGYYADGNYIDGNYTDGYYADGYYADGNYA 338



 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +3

Query: 342 GSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           G  Y + N A G Y  GNY   N    N+  G Y D  ++
Sbjct: 449 GGYYASGNYADGNYAGGNYADGNYEDGNYAGGYYADGNYA 488



 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +3

Query: 351 YTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           Y   N A G Y  GNY   N  G N+  G Y D  ++
Sbjct: 502 YAGGNYADGNYAGGNYADGNYAGGNYAGGYYTDGNYT 538



 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +3

Query: 339 TGSVYTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAHS 458
           TG  Y     AG  Y  GN+   N  G N+ +G Y D  ++
Sbjct: 698 TGGNYAGGYYAGGNYADGNHIDGNYTGGNYADGNYADGNYA 738


>SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89)
          Length = 589

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
 Frame = +1

Query: 214 QRGNMGGNYERAHKWIHLLKDI*AARS-HKLKESWARRDQKPERVACTLLQILRAFMDRE 390
           QRG  GG+ E++ + I + ++    RS  + +E+  +RD  PE  +  L Q + +    E
Sbjct: 260 QRGPQGGSSEQSTREITITRESPERRSGQRTREAVVQRD-GPEETSGQLTQEVISQSPEE 318

Query: 391 IMILVT*GDVIFKKERT*IMRTPHCYPTRNIVRKR 495
           + +  T   +I   ER  + R P   PTR ++++R
Sbjct: 319 LSVQSTRETII---EREELKRYPG-KPTREVIKQR 349


>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3760

 Score = 30.7 bits (66), Expect = 0.99
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
 Frame = +1

Query: 214  QRGNMGGNYERAHKWIHLLKDI*AARS-HKLKESWARRDQKPERVACTLLQILRAFMDRE 390
            QRG  GG+ E++ + I + ++    RS  + +E+  +RD  PE  +  L Q + +    E
Sbjct: 3366 QRGPQGGSSEQSTREITITRESPERRSGQRTREAVVQRD-GPEETSGQLTQEVISQSPEE 3424

Query: 391  IMILVT*GDVIFKKERT*IMRTPHCYPTRNIVRKR 495
            + +  T   +I   ER  + R P   PTR ++++R
Sbjct: 3425 LSVQSTRETII---EREELKRYPG-KPTREVIKQR 3455


>SB_4837| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 121

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
 Frame = -2

Query: 411 LGY*DHNFPIHKSPQNLQQCTRYPFWFLIPPRPT----LLQLVRSRRSNVFEQV-NPFVS 247
           L Y   N+P  KS  ++ +   Y        +P+    L  +VRS    + + + NP+V+
Sbjct: 20  LRYASVNYPFSKSKLSVTRARAYKVARCRTIQPSIGEALSSIVRSSHLPIHQYITNPYVT 79

Query: 246 TFIITPHVSSLRTIKSRLATF 184
               TP V  LR  KS L  +
Sbjct: 80  NTTFTPEVHKLRISKSFLCEY 100


>SB_20482| Best HMM Match : p450 (HMM E-Value=4.6e-28)
          Length = 473

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = -1

Query: 256 ICEHVHNYPPCFLFAHHKIQTCYLRPTNF*NSESLLF-LYKV----QVWPKP 116
           + E +  YPP FL A    + C ++   F    S++  +Y +    ++WP+P
Sbjct: 412 VSETLRMYPPAFLQAREVTEDCVIKDMRFRKGVSIIMDIYSLHHDPELWPEP 463


>SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
          Length = 869

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
 Frame = -1

Query: 325 PSSPNSPSTC-EIAPLKCL 272
           P+SP+SPSTC E+ P+K L
Sbjct: 166 PTSPDSPSTCDEVLPMKFL 184


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,635,194
Number of Sequences: 59808
Number of extensions: 354710
Number of successful extensions: 936
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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