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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30015X
         (520 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              185   2e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             183   9e-47
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             182   2e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         182   2e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      181   3e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              180   8e-46
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)                162   1e-40
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)                 65   4e-11
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  61   6e-10
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)              49   3e-06
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)              48   6e-06
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)             34   0.081
SB_46036| Best HMM Match : PSRT (HMM E-Value=1)                        29   3.0  
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)                29   3.0  
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.0  
SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.3  
SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.0  
SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4)                   27   9.3  
SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)                  27   9.3  

>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  185 bits (451), Expect = 2e-47
 Identities = 85/90 (94%), Positives = 89/90 (98%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLYANTVMSGGTTMYPG+ADRMQKEI+ALAPST+KIKIIAPPERKYSVWIGGSI
Sbjct: 260 DVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSI 319

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 320 LASLSTFQQMWISKQEYDESGPAIVHRKCF 349


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  183 bits (445), Expect = 9e-47
 Identities = 84/90 (93%), Positives = 88/90 (97%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLYANTV+SGGTTMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSI
Sbjct: 249 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSI 308

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 309 LASLSTFQQMWISKQEYDESGPAIVHRKCF 338


>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  182 bits (442), Expect = 2e-46
 Identities = 83/90 (92%), Positives = 88/90 (97%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSI
Sbjct: 287 DVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSI 346

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 347 LASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  182 bits (442), Expect = 2e-46
 Identities = 83/90 (92%), Positives = 88/90 (97%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLYANTV+SGG+TMYPGIADRMQKEIT+LAP T+KIKIIAPPERKYSVWIGGSI
Sbjct: 286 DVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSI 345

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 346 LASLSTFQQMWISKQEYDESGPSIVHRKCF 375


>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  181 bits (441), Expect = 3e-46
 Identities = 83/90 (92%), Positives = 88/90 (97%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLYANTV+SGG+TMYPGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSI
Sbjct: 287 DVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSI 346

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 347 LASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  180 bits (437), Expect = 8e-46
 Identities = 82/90 (91%), Positives = 88/90 (97%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLYANTV+SGG+TM+PGIADRMQKEI+ALAP T+KIKIIAPPERKYSVWIGGSI
Sbjct: 286 DVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSI 345

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 346 LASLSTFQQMWISKQEYDESGPSIVHRKCF 375


>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
          Length = 149

 Score =  162 bits (394), Expect = 1e-40
 Identities = 73/90 (81%), Positives = 83/90 (92%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSI 341
           DVDIRKDLY+N V+SGG+TM+PGIADRMQKEI  LA +++K+K+IAPPERKYSVWIGGSI
Sbjct: 60  DVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSI 119

Query: 340 LASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           LASLSTFQQMWI+KEEY E GP IVHRKCF
Sbjct: 120 LASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149


>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
          Length = 543

 Score = 64.9 bits (151), Expect = 4e-11
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
 Frame = -1

Query: 517 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITA----------------LAPSTIKIKII 386
           +D+R+ LY N V+SGG+TM+     R+Q++I                  + P  I+ ++I
Sbjct: 236 IDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVI 295

Query: 385 APPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 251
           +   ++Y+VW GGS+LAS   F  +  +K +YDE GP I     F
Sbjct: 296 SHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 25/67 (37%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKII---APPERKYSVWIG 350
           D+DIR  L+ + +++GG T+  G  +R+ +E+ +  P ++++K+I   +  E++++ WIG
Sbjct: 164 DIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIG 223

Query: 349 GSILASL 329
           GSILASL
Sbjct: 224 GSILASL 230


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 29/110 (26%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL---------------------APST 404
           D+D R + Y + V+SGG+TMYPG+  R+++EI  L                      P T
Sbjct: 290 DIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTSKLSSGMGMEQIPLT 349

Query: 403 I-----KIKI-IAPP-ERKYSVWIGGSILAS-LSTFQQMWISKEEYDESG 278
                 K KI I  P  RK+ V++GG++LA  +      W++++EY+E G
Sbjct: 350 ADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399


>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 245

 Score = 47.6 bits (108), Expect = 6e-06
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
 Frame = -1

Query: 517 VDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPST-------IK-IKIIAPP-ERKY 365
           +D RK L  N V+ GGT M PG   R+ +EI  L  S        IK +K+  PP     
Sbjct: 71  IDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANI 130

Query: 364 SVWIGGSILASLSTFQQMWISKEEYDE 284
           + W+GG+I  SL        ++E Y +
Sbjct: 131 TAWLGGAIFGSLEVLADRSTTRERYQQ 157


>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
          Length = 367

 Score = 33.9 bits (74), Expect = 0.081
 Identities = 12/23 (52%), Positives = 20/23 (86%)
 Frame = -1

Query: 520 DVDIRKDLYANTVMSGGTTMYPG 452
           D+D+R+ LY+N V+SGG+T++ G
Sbjct: 269 DLDLRRVLYSNIVLSGGSTLFKG 291


>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
          Length = 878

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 452 YRRQDAEGDHRPRALDHQDQDHRSPREE 369
           +RRQDA  DHR +  DH  QD   PR++
Sbjct: 664 HRRQDA--DHRRQDADHHRQDVVHPRQD 689


>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
          Length = 1973

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 342 MDPPIHTEYFLSGGAMILILMVEGARAVISFCILSAIPGYMV-VPPD 479
           +DPP+  +Y L+GG  ++   ++       FCI     G++V  PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCIFQ---GFVVPTPPE 801


>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 205

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 490 NTVMSGGTTMYPGIADRMQKEITALAP 410
           N  ++GG TMY     R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158


>SB_10094| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 178

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -1

Query: 493 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 374
           AN V+     +   + +R+ KE+  L     +K KIIAPPE
Sbjct: 44  ANPVIHPARKVPVSLGERLDKELNRLTELGIVKEKIIAPPE 84


>SB_20153| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 178

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -1

Query: 493 ANTVMSGGTTMYPGIADRMQKEITALAP-STIKIKIIAPPE 374
           AN V+     +   + +R+ KE+  L     +K KIIAPPE
Sbjct: 44  ANPVIHPARKVPVSLGERLDKELNHLTELGIVKEKIIAPPE 84


>SB_34211| Best HMM Match : DUF1103 (HMM E-Value=6.4)
          Length = 126

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 449 RRQDAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFP 330
           RRQ     HR R  D +D+D R      L  DR+ +  +P
Sbjct: 4   RRQGTATIHRYRQSDLRDRDRRRVLPRFLEQDRFDNSDYP 43


>SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)
          Length = 352

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 155 SGITRYNVLTVAFRTRTSTTPHSTGVT 235
           +GIT  N++T A  T TSTT  +  VT
Sbjct: 294 NGITNTNIITTATTTTTSTTISTITVT 320


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,245,764
Number of Sequences: 59808
Number of extensions: 288671
Number of successful extensions: 943
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1160542895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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