Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30011
(901 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 131 6e-31
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 104 9e-23
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 70 2e-12
SB_8629| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) 39 0.006
SB_8625| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0) 38 0.011
SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0) 36 0.059
SB_59449| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_58579| Best HMM Match : DMP1 (HMM E-Value=2.3) 35 0.10
SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64) 32 0.73
SB_48655| Best HMM Match : BAG (HMM E-Value=6.2) 31 0.96
SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013) 31 1.3
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 31 1.3
SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32) 31 1.7
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 30 2.2
SB_44038| Best HMM Match : DUF1168 (HMM E-Value=1.5) 30 2.9
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_38025| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_21869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 29 5.1
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2) 29 6.8
SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022) 29 6.8
SB_19136| Best HMM Match : Pyridox_oxidase (HMM E-Value=8.9) 29 6.8
SB_7642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_43296| Best HMM Match : DUF957 (HMM E-Value=4.3) 29 6.8
SB_37206| Best HMM Match : MFS_1 (HMM E-Value=3.4e-17) 29 6.8
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 6.8
SB_20213| Best HMM Match : MFS_1 (HMM E-Value=0.023) 28 8.9
SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 28 8.9
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 131 bits (317), Expect = 6e-31
Identities = 89/290 (30%), Positives = 141/290 (48%)
Frame = +3
Query: 6 RQYIIAGVANIGTIALGFALGWTSPVNLKLLDPNDTPLSRPVTNEEISWIGSLLSVGAMF 185
R + +A +G ++ GF LG++S L+ ++ S +T + SW SL+++GA+
Sbjct: 43 RMVLATFIAALGPLSFGFCLGYSSSALEDLIA--ESKESVKLTVSQGSWFSSLVTLGAIL 100
Query: 186 GPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYTVLP 365
G +GG+ GR+ +I+ +VP VG++L+ + M+Y GR GLAVGM+ +P
Sbjct: 101 GAPLGGWTLEYFGRKGTIMACAVPFEVGWMLIAYANSHYMLYIGRFITGLAVGMVSLTVP 160
Query: 366 MYCAEIATDDTRGAXXXXXXXXXXXXXXXXXXXXXXXPYFTLQYVGIXXXXXXXXXXXXM 545
+Y AEI++ RG + L G +
Sbjct: 161 VYIAEISSPSLRGMLGSVNQLAVTMGLLLAYSMGVVLKWRWLACSGAIFPALLVVLMFFV 220
Query: 546 PETPMYYLNQDDVDSAAKCLQIIRGKSRAGVQAELDKMAAEVKAANEKTANLSDVFRGAN 725
PETP + L+ A + RG A V+ E ++ A + N ++ + ++ R A
Sbjct: 221 PETPRWSLSHKRRRDALDAMMWFRG-PEADVEEECYRIEATMD--NTQSMSCAEFCRPAI 277
Query: 726 FKAFYISCALVAAQQLCGINAVLFYMATIFETAGASLDSAIATIIIGAVQ 875
K +IS AL+ QQ CGINA+LF A+IF AG DS ++IIGAVQ
Sbjct: 278 MKPLFISIALMFFQQFCGINAILFNSASIFHQAGFQ-DSKAVSVIIGAVQ 326
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 104 bits (250), Expect = 9e-23
Identities = 67/226 (29%), Positives = 108/226 (47%)
Frame = +3
Query: 3 WRQYIIAGVANIGTIALGFALGWTSPVNLKLLDPNDTPLSRPVTNEEISWIGSLLSVGAM 182
W ++ +A +G ++ G+ +G++S +L + N T L + +EI+W GSLL++GAM
Sbjct: 38 WAVWMATFIAALGPLSFGYCMGYSSAATTQLENKNATDLY--LNADEITWFGSLLNIGAM 95
Query: 183 FGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYTVL 362
G I GFL IGR+++++L+SVP G++L+ +N AM+ AGR GL VGM +
Sbjct: 96 LGGPIQGFLIDLIGRKFALILTSVPFCSGWLLIGFGKNAAMLNAGRFMSGLGVGMASLNV 155
Query: 363 PMYCAEIATDDTRGAXXXXXXXXXXXXXXXXXXXXXXXPYFTLQYVGIXXXXXXXXXXXX 542
P+Y +E A+ RGA + G
Sbjct: 156 PVYISETASFSNRGAMGSINQLGITAGILISYAIGYAFDWRWSAVAGSFPAALLVVLMAF 215
Query: 543 MPETPMYYLNQDDVDSAAKCLQIIRGKSRAGVQAELDKMAAEVKAA 680
MPET + + + A K L +RG ++DK E+KA+
Sbjct: 216 MPETARWLIAKKKETRARKTLLWLRGP-----DYDIDKELCEIKAS 256
Score = 48.8 bits (111), Expect = 6e-06
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +3
Query: 729 KAFYISCALVAAQQLCGINAVLFYMATIFETAGASLDSAIATIIIGAVQVGASAVT 896
+ F IS +L QQ GINA +FY ATIF+ AG D I+IGAVQ ASA++
Sbjct: 340 RPFLISMSLHFFQQFSGINAFMFYCATIFQKAGFK-DPTGVPILIGAVQFVASAIS 394
>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 493
Score = 70.1 bits (164), Expect = 2e-12
Identities = 60/248 (24%), Positives = 98/248 (39%), Gaps = 8/248 (3%)
Frame = +3
Query: 177 AMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFWGLAVGMLYT 356
A+ G +GG L +GR+ ++L S G V++ ++ GR+ GL +G
Sbjct: 100 AIVGAVLGGILNDSLGRKPVLVLCSGVFTAGAVVMGVAGTKHVLLVGRLVIGLGIGGASM 159
Query: 357 VLPMYCAEIATDDTRGAXXXXXXXXXXXXXXXXXXXXXXXPY-------FTLQYVGIXXX 515
+P+Y AE A RG Y F L +
Sbjct: 160 TVPIYVAEAAPSSMRGKLVTLNNLFITGGQFIASVVDGIFAYDRQNGWRFMLGLAAVPSI 219
Query: 516 XXXXXXXXXMPETPMYYLNQDDVDSAAKCLQIIRGKSRAGVQAELDKMAAEVKAANEKTA 695
+PE+P + +++ A L IRG++ + E + +V+
Sbjct: 220 IMFFGCVI-LPESPRWLISKCKYAEARAALCKIRGRTDVDRELEAVRRTCKVERKERSGQ 278
Query: 696 NLSDVFRGANFK-AFYISCALVAAQQLCGINAVLFYMATIFETAGASLDSAIATIIIGAV 872
L + R N + A + C L A QQLCGIN V++Y ATI +G +S + + A+
Sbjct: 279 VLIRILRFPNTRRALLVGCMLQAIQQLCGINTVMYYSATIILMSGIG-NSKTSIWLAAAI 337
Query: 873 QVGASAVT 896
G + T
Sbjct: 338 AFGNTLFT 345
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 150 WIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYAGRVFW 329
W+ + ++ G +G FL +IGRR +L S +I+ L+ +AM + +V
Sbjct: 332 WLAAAIAFGNTLFTIVGIFLVERIGRRKLLLGSLAGVILSLFLLGGAFYLAMQHNPKVST 391
Query: 330 GLAVGMLYT 356
+ ++T
Sbjct: 392 AETINPVFT 400
>SB_8629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 132 TNEEISWIGSL-LSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMI 308
T+ S+ G++ L+ MFGPF GG L + G R + SS+ I+G V V N+ ++
Sbjct: 81 THNSPSFPGAIALAFSGMFGPF-GGHLTDRFGCRVVFMSSSLITIIGLVSSSFVSNIVLL 139
Query: 309 YAGRVFW-GLAVGMLY 353
Y F G+ ++Y
Sbjct: 140 YFTYGFMNGIGSNLIY 155
>SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)
Length = 201
Score = 38.7 bits (86), Expect = 0.006
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +3
Query: 180 MFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVA---VQNVAMIYAGRVFWGLAVGML 350
M G G A++ GR+ S+L ++ IVG +L+ + ++ GR G+ GM
Sbjct: 1 MIGALAGPLFANRFGRKRSLLANNGLAIVGALLMFLSYFAKTSPLLTVGRFVIGINCGMN 60
Query: 351 YTVLPMYCAEIATDDTRGA 407
+ P+Y +E+A RG+
Sbjct: 61 TAIAPIYLSELAPIHLRGS 79
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 777 GINAVLFYMATIFETAGASLDSAIATIIIGAVQVGASAV 893
G+ VL+Y +IFE G +S +AT IG V + +A+
Sbjct: 99 GLKQVLYYSTSIFEKVGVP-ESRVATTGIGVVALVFTAI 136
>SB_8625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 38.3 bits (85), Expect = 0.008
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 126 PVTNEEISWIGSL-LSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVA 302
PV + ++ G++ L+ MFGPF GG L + G R + SS+ I+G V V N+
Sbjct: 260 PVYQADAAFPGAIALAFSGMFGPF-GGHLTDRYGCRVVFMSSSLITIIGLVSSSFVPNIV 318
Query: 303 MIY 311
++Y
Sbjct: 319 LLY 321
>SB_16012| Best HMM Match : Glyco_hydro_20 (HMM E-Value=0)
Length = 1788
Score = 37.9 bits (84), Expect = 0.011
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -1
Query: 883 APTCTAPI-MIVAMAESRLAPAVSKMVAM*NSTALMPQSCWAATRAHEM*NALKLAPRNT 707
AP C AP M A+ S PA+ KM A +T + P SCW R N ++A R
Sbjct: 21 APNCEAPSRMDTALLLSN--PALLKMDAQLKTTTMAPHSCWKTIRPTPTINGFRMAGRRN 78
Query: 706 SDKLAVFSFAALTSA 662
S ++ FS+ + S+
Sbjct: 79 SLNVS-FSWVSAKSS 92
>SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0)
Length = 839
Score = 35.5 bits (78), Expect = 0.059
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Frame = +3
Query: 3 WRQYIIAGVANIGTIA-LGFALGWTSPVNLKLLDPNDTPLSRPVTNEEISWIGSLLSVGA 179
W +++ A+I TI LGF+ + + + L ND+ ++I+W+GS+
Sbjct: 406 WWSFLVCVSASISTIIILGFSHCFAVVMPVLLNYFNDS-------RQKIAWVGSITQCLT 458
Query: 180 MFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQ-NVAMIYAGRVFWGLAVGMLY 353
F + G L K+ R + +L S+ + VL + ++ + ++ V +GL + Y
Sbjct: 459 FFASPLAGLLIGKLSFRVTAVLGSLTCCISLVLTSFTKASLHIFFSYSVLYGLGSCLFY 517
>SB_59449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 35.1 bits (77), Expect = 0.078
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 1/150 (0%)
Frame = -1
Query: 853 VAMAESRLAPAVSKMVAM*NSTALMPQSCWAAT-RAHEM*NALKLAPRNTSDKLAVFSFA 677
VA+A R S V +S++L S A + +AH ++ P++++ +AV
Sbjct: 5 VAVAARRSLSTASSSVL--HSSSLAKSSTVAVSAQAHSQYCTVQALPKSSTVAVAVQRSL 62
Query: 676 ALTSAAILSNSACTPARDFPLMICRHLAAESTSSWFK*YIGVSGMKKNSTQKTATTAIPT 497
+ S+++L +S + + R L S+S + + K+ST + P
Sbjct: 63 STASSSVLHSSCLAKSSTVAVAARRSLRTASSS-----VLHSLSLAKSSTVAVSAQPHPQ 117
Query: 496 YCSVK*GTNGPTPYTSRKPSTTNS*RNDPR 407
YC+V+ G + ++ P T+ R PR
Sbjct: 118 YCTVQAGPSPARSQSAPVPDPTDGQRPSPR 147
>SB_58579| Best HMM Match : DMP1 (HMM E-Value=2.3)
Length = 682
Score = 34.7 bits (76), Expect = 0.10
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -3
Query: 593 SRVYVVLVQIIHRGFRHEEEQHAEDCDYSYPNILQREIGDERSHSVHQQEAKHYEQLKE- 417
S + V+ ++ R E A D + + ++++GD SH V +H EQ K+
Sbjct: 462 SESHDVIYHVLENPQRKGSEDFAVSLDST--EVTRKDLGDSESHDVIYHVLEHQEQEKDS 519
Query: 416 -RSQGTARVVRGDLG 375
R + V++GDLG
Sbjct: 520 TRCLHSTEVIKGDLG 534
>SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64)
Length = 520
Score = 31.9 bits (69), Expect = 0.73
Identities = 15/79 (18%), Positives = 46/79 (58%)
Frame = -3
Query: 560 HRGFRHEEEQHAEDCDYSYPNILQREIGDERSHSVHQQEAKHYEQLKERSQGTARVVRGD 381
H+ + E+E +D ++ + L +++ + R+ ++ ++E + ++++KE++ +A+
Sbjct: 189 HQLAKEEQEDRCDDEEFQEIDSLNQQLTERRARALEKKENELFKEIKEQAHLSAKEA-DR 247
Query: 380 LGAVHRQNRIQHTDCQTPE 324
L + H+++ Q+ D + E
Sbjct: 248 LMSKHKEDLDQYADKKARE 266
>SB_48655| Best HMM Match : BAG (HMM E-Value=6.2)
Length = 190
Score = 31.5 bits (68), Expect = 0.96
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 521 DC--DYSYPNILQREIGDERSHSVHQQEAKHYEQLKERSQGTARVVRGDLG 375
DC DYS I+ E+G +HS A ++ E GTAR+VRGD+G
Sbjct: 111 DCIDDYSR-RIMWLEVGRTNNHS--GVVASYFLDCVESVGGTARIVRGDMG 158
>SB_38173| Best HMM Match : PAN (HMM E-Value=0.0013)
Length = 340
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -2
Query: 471 TVPLRTPAGSQALRTAEGTIPGHRACRPWRSRRSTSAKPYTAYRLPDPRTLCRRKSL 301
T P ++ ++ + + T P ++ +P +S + T +KP LPD R CR S+
Sbjct: 180 TKPTKSTKPTKPTKPTKSTKPT-KSTKPTKSTKPTESKPTAPTSLPDQRPNCRLPSM 235
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/85 (21%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = -3
Query: 542 EEEQHAEDCDYSYPNILQREIGDERSHSVHQQEAKHYEQLKERSQGTA---RVVRGDLGA 372
+++Q +D + P+ Q + E+ + ++E + EQ K + T + + D +
Sbjct: 891 DKDQEKQDHEQEKPDKDQEKQDREQEKTDKEREQPYQEQDKPDQENTEPGPKQIGPDESS 950
Query: 371 VHRQNRIQHTDCQTPEHSAGVNHCN 297
++R+ + DCQ A N+C+
Sbjct: 951 LNRERDTKRADCQQKNTPANPNYCD 975
>SB_3066| Best HMM Match : dsrm (HMM E-Value=2.2e-32)
Length = 429
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 233 PSTTDF*SQETSDEWTEHSSDGEKGSDP 150
P+ DF + T + +TE+S +G+K SDP
Sbjct: 132 PTNEDFTADATGNSFTENSENGQKTSDP 159
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +3
Query: 144 ISWI-GSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIYA-G 317
+SW S++ G +FG + G L+ K GRR + +SS ++ + +YA
Sbjct: 92 LSWATNSIMFTGWLFGNIVFGILSDKYGRRKVLFISSC-MVCWVAFASSFVPYYWLYAVF 150
Query: 318 RVFWGLAVGMLYTVLPMYCAEIATDDTR 401
R F G +G +L + E R
Sbjct: 151 RFFIGFGLGGSIVILFIMATEFVGPQKR 178
>SB_44038| Best HMM Match : DUF1168 (HMM E-Value=1.5)
Length = 149
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -2
Query: 396 CRPWRSRRSTSAKPYTAYRL--PDPRTLCRRKSLQHFERPP 280
C +++R+ + Y A RL P PR + + LQH E+PP
Sbjct: 9 CIQAQTKRTPHTRQYLAARLAYPQPRGNRQAQQLQHVEKPP 49
>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 675 AANEKTANLSDVFRGANFKAFYISCALVAAQQLCGI 782
AA EKT+NL D +A Y LVAA +CG+
Sbjct: 738 AAVEKTSNLFDAESPVFQQAIYTCLGLVAALTICGL 773
>SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +3
Query: 549 ETPMYYLNQDDVDSAAKCLQIIRGKSRAGVQAELDKMAAEVKAANEKTANLSD 707
+ P + D D + ++ RG+S +GV KMAA++K +N +++ +D
Sbjct: 210 DVPCSSSDDSDRDRSPAPERMTRGRSGSGVVLSESKMAADMKNSNAESSGSND 262
>SB_38025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 162 LLSVGAMFGPFIGGFLASKIGRR-WSILLSSVPLIVGFVLVVAVQNV 299
++++ + G + GF+ ++GR + LSS +++G L+ VQN+
Sbjct: 446 VIAIPLILGTPVSGFIFDRLGRYDVAFYLSSAAVVIGICLMFVVQNL 492
>SB_21869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1123
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -1
Query: 541 KKNSTQKTATTAIPTYCSVK*GTNGPTPYTSRKPSTTN 428
K+ +TQK TT PTY ++ N T TS +P+TT+
Sbjct: 622 KRPATQKALTTLPPTYTTL----NPATDQTSAQPTTTH 655
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 458 VHQQEAKHYEQLKERSQGTARVVRGDLGAVHRQNRIQHTDCQT 330
+ +Q+ ++YE K +G V+RG+ + RQ R H +T
Sbjct: 331 ITRQQRRYYEATKTLLRGNKDVLRGNKDVITRQQRRYHEATKT 373
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 136 TKKYHGSDPFSPSELCSVHSSEVSWLQKSVVDG 234
+K H S+P S EL HS+ +W +S V G
Sbjct: 1557 SKTSHHSEPDSRPELSHKHSARTTWSSRSPVTG 1589
>SB_38717| Best HMM Match : Cornifin (HMM E-Value=7.2)
Length = 318
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 214 EARKPPMNGPNIAPTERRDPIHDISSLVTGR 122
++R P+ GP +PTER PI D + TG+
Sbjct: 47 DSRHRPVGGPAYSPTERAYPITDRAYSPTGQ 77
>SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022)
Length = 453
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 153 IGSLLSVGAMFGPFIGGFLASKIGRRWSILL-SSVPLIVGF 272
+ S G + G +GG+ + + GRR +L+ S++ LI+ F
Sbjct: 118 VQSCFFAGMLVGSMVGGWASDRFGRRLCLLVGSAIMLILSF 158
>SB_19136| Best HMM Match : Pyridox_oxidase (HMM E-Value=8.9)
Length = 312
Score = 28.7 bits (61), Expect = 6.8
Identities = 29/101 (28%), Positives = 43/101 (42%)
Frame = -3
Query: 821 RFEDGRHVEQHCVDAAELLGGHEGARDVERLEVGAAEHVR*VSSFLVCSFDFSGHLV*LS 642
RF G V Q+ A + +G V GA+ H S LV + S + +
Sbjct: 137 RFTTGGPVVQY---ARQRMGQLTTGGPVYSSAYGASHHRW--PSMLVSVWGVSPQVAQYA 191
Query: 641 LHTSARFSSDDLQTFSSRVYVVLVQIIHRGFRHEEEQHAED 519
+ ++ RFSSDD R+ ++ +G R E EQ ED
Sbjct: 192 VRSATRFSSDDEIVVPVRINAPVIS--SQGTRQEREQRLED 230
>SB_7642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 349 CIRFCRC-TAPRSPRTTRAVPWDRSFSCS*CLASCWCTEWDRSSPISRC 492
C+ RC T R P TR + R + + CL C R ++RC
Sbjct: 56 CLTMTRCLTMTRCPTITRCLTITRCLTMTRCLTMTRCLTMTRCLTMTRC 104
>SB_43296| Best HMM Match : DUF957 (HMM E-Value=4.3)
Length = 447
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 188 SIHRRFPGFKNRSSMEYSSVICSTHSRFCFGGGRSKCCN 304
++H+ PGF SS +CST C G C N
Sbjct: 107 ALHQALPGFPLYSSKALDGFVCSTDEEKCMTGLCRDCPN 145
>SB_37206| Best HMM Match : MFS_1 (HMM E-Value=3.4e-17)
Length = 1088
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/80 (21%), Positives = 38/80 (47%)
Frame = +3
Query: 120 SRPVTNEEISWIGSLLSVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNV 299
SRPV + + WI ++ A+FG I G +A + +++ + + ++
Sbjct: 633 SRPVNS--MGWIFFSQALSALFGSSISGIMADRYDCNIILVVCVACVAISLTVIPLCSQF 690
Query: 300 AMIYAGRVFWGLAVGMLYTV 359
++ + F G+ +G++ TV
Sbjct: 691 QLMLSVFAFLGVNMGIIDTV 710
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Frame = -3
Query: 554 GFRHE-EEQHAEDCDYSYPNILQREIGDERSHSVHQ-QEAKHYEQLK----ERSQGTARV 393
G RH+ ++ +D D + N + D+ H+ H Q++KH+ + Q T+
Sbjct: 630 GLRHDLHNKNYDDGDDNIDNDGDVNVNDDSRHNYHYTQKSKHHHEKNIDDSNEKQSTSEK 689
Query: 392 VRGDLGAVHRQNRIQHTDCQTPEHSAGVNHCNILNGHHQNKTD 264
+ ++ ++ + + V H N HHQN D
Sbjct: 690 DKFSDNGDDNDDK-ENDESHAKDEDERVRHAGKDNEHHQNNYD 731
>SB_20213| Best HMM Match : MFS_1 (HMM E-Value=0.023)
Length = 247
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 147 SWIGSLL-SVGAMFGPFIGGFLASKIGRRWSILLSSVPLIVGFVLVVAVQNVAMIY-AGR 320
+W+GSL ++ F P F+ + G R L+ + +G + + + ++Y
Sbjct: 76 AWVGSLAIALSMTFSPIAAKFI-ERFGPRLVSLIGGIVAALGLFITSQISTIDIMYLTYS 134
Query: 321 VFWGLAVGMLYT 356
V +G LYT
Sbjct: 135 VVFGFGSSCLYT 146
>SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 599
Score = 28.3 bits (60), Expect = 8.9
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 551 FRHEEEQHAEDCDYSYPNILQREI-GDE--RSHSVHQQEAKHYEQLKE 417
F EE + E+ D S + + E G+E +SH HQQ K E+ KE
Sbjct: 465 FASEESERKENDDQSEADFEKNEEEGEENTKSHEEHQQRTKEREKPKE 512
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,777,387
Number of Sequences: 59808
Number of extensions: 714922
Number of successful extensions: 2528
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2516
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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