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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30009X
         (419 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_39888| Best HMM Match : PH (HMM E-Value=3.5e-22)                    29   1.2  
SB_43027| Best HMM Match : U79_P34 (HMM E-Value=0.066)                 29   1.6  
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)                29   2.1  
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)                     28   2.7  
SB_52112| Best HMM Match : PH (HMM E-Value=2.4e-14)                    28   2.7  
SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0)                      28   2.7  
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)               27   4.8  
SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.3  
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.3  
SB_22230| Best HMM Match : CARD (HMM E-Value=3.8e-17)                  27   6.3  
SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)                 27   8.3  
SB_56469| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-12)         27   8.3  
SB_30809| Best HMM Match : Mab-21 (HMM E-Value=0)                      27   8.3  
SB_21614| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-41)             27   8.3  
SB_10953| Best HMM Match : HALZ (HMM E-Value=0.25)                     27   8.3  
SB_40295| Best HMM Match : HALZ (HMM E-Value=0.25)                     27   8.3  
SB_8304| Best HMM Match : PLAT (HMM E-Value=0)                         27   8.3  

>SB_39888| Best HMM Match : PH (HMM E-Value=3.5e-22)
          Length = 1067

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 333 EEDKEKKPGWSKGKPGDQKVKEEE 262
           EED+EK  G    K GD+K+KE E
Sbjct: 628 EEDEEKDEGELDNKYGDEKIKETE 651


>SB_43027| Best HMM Match : U79_P34 (HMM E-Value=0.066)
          Length = 443

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 336 EEEDKEKKPGWSKGKPGDQKVKEE 265
           ++EDK K    SKGK GD+K +E+
Sbjct: 213 KKEDKRKDSAKSKGKDGDRKKRED 236


>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2656

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -1

Query: 233  IIKTFHQLSIIMLCAL*CVCLQRDLNFIYLAA-CAVSMCERARYI 102
            I+  F  LS + LCA+    L   L ++YL A C  ++    RY+
Sbjct: 1838 ILALFVSLSYLCLCAICIFALSVSLRYLYLCAICIFALSVSLRYL 1882


>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
          Length = 2114

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -3

Query: 375  NQLKVVKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEE 265
            ++ K  KKKE   EE+DK+KK    K K  +++ ++E
Sbjct: 1924 DEKKEKKKKEENEEEDDKKKKTKKKKKKEEEEQEEDE 1960



 Score = 26.6 bits (56), Expect = 8.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 366  KVVKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEE 262
            K  KKK+   EEED +KK    K K  +++ +E+E
Sbjct: 1926 KKEKKKKEENEEEDDKKKKTKKKKKKEEEEQEEDE 1960


>SB_52112| Best HMM Match : PH (HMM E-Value=2.4e-14)
          Length = 356

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -3

Query: 333 EEDKEKKPGWSKGKPGDQKVKEEE 262
           EED+EK  G    K GD+K KE E
Sbjct: 144 EEDEEKDEGELDNKYGDEKTKETE 167


>SB_1091| Best HMM Match : Cupin_4 (HMM E-Value=0)
          Length = 584

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -3

Query: 357 KKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEEVEA 253
           KKKE + EEE+K ++   SK K   +K K+E+ E+
Sbjct: 492 KKKEESEEEEEKSEEEKKSKKKTKTKKGKKEKQES 526


>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
          Length = 865

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 333 EEDKEKKPGWSKGKPGDQKVKEEEVEA 253
           + DK+ +  WSK K  D K++E+ + A
Sbjct: 304 DRDKKSRRSWSKSKERDSKLREKTMVA 330


>SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 276

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -3

Query: 378 RNQLKVVKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEEVE 256
           + + K  KKKE   EEE++E++    K +  +++ +EEE E
Sbjct: 181 KKKKKKKKKKEEEEEEEEEEEEEKEEKEEEEEEEEEEEEEE 221


>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1137

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -3

Query: 405  QNKAAEFSFRNQLKVVKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEEVE 256
            + K  E   +++   +++K+   EEE+K++K    + K  D+K KEEE E
Sbjct: 1032 KTKEGEKKMKDEQDEIERKK--AEEEEKKRKEE-EESKKKDEKEKEEEDE 1078


>SB_22230| Best HMM Match : CARD (HMM E-Value=3.8e-17)
          Length = 555

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 411 QLQNKAAEFSFR-NQLKVVKKKEFTLEEEDKEKKPGWSK 298
           Q Q+  +  SF   QLK  +KK+    +E+KE+K G  K
Sbjct: 172 QFQSDFSTMSFEIKQLKEARKKDAKKLKEEKEQKAGLEK 210


>SB_56618| Best HMM Match : DUF1213 (HMM E-Value=0.022)
          Length = 1421

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = -3

Query: 399  KAAEFSFRNQLKVVKKKEFTL--EEEDKEKKPGWSKGKPGDQKVKEEEVEA 253
            +AAE   R +L+V KK+E     EEE +EK+    + K   +K K+E +E+
Sbjct: 1172 RAAEAE-RRRLEVQKKREEKKKREEEMREKEKEMEQNKIDQEKRKQELMES 1221


>SB_56469| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-12)
          Length = 652

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -3

Query: 399 KAAEFSFRNQLKVVKKKEFTLEEEDK 322
           K+ +F F NQ +++KKK  TLE E++
Sbjct: 14  KSMDF-FNNQFELIKKKVTTLERENE 38


>SB_30809| Best HMM Match : Mab-21 (HMM E-Value=0)
          Length = 1710

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 213  TVNNYVMCPIVCLSAKRLKFYLSGCLRC 130
            TV +++  P VC  ++   F LSGC+ C
Sbjct: 1608 TVISFLWRPDVCAISEHKAFILSGCIFC 1635


>SB_21614| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-41)
          Length = 1047

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -3

Query: 399 KAAEFSFRNQLKVVKKKEFTLEEEDK 322
           K+ +F F NQ +++KKK  TLE E++
Sbjct: 14  KSMDF-FNNQFELIKKKVTTLERENE 38


>SB_10953| Best HMM Match : HALZ (HMM E-Value=0.25)
          Length = 319

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -3

Query: 399 KAAEFSFRNQLKVVKKKEFTLEEEDK 322
           K+ +F F NQ +++KKK  TLE E++
Sbjct: 148 KSMDF-FNNQFELIKKKVTTLERENE 172


>SB_40295| Best HMM Match : HALZ (HMM E-Value=0.25)
          Length = 477

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -3

Query: 399 KAAEFSFRNQLKVVKKKEFTLEEEDK 322
           K+ +F F NQ +++KKK  TLE E++
Sbjct: 229 KSMDF-FNNQFELIKKKVTTLERENE 253


>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
          Length = 1182

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -3

Query: 411  QLQNKAAEFSFRNQLKVVKKKEFTLEEEDKEKKPGWSKGKPGDQKVKEEEVE 256
            + Q    E   R + K  +++    EEE++++K   +KGK  +++ KE+E E
Sbjct: 894  EFQRIMTEIKMRAEKKD-EERHLREEEEERQRKEA-AKGKKEEEEKKEKEAE 943


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,040,076
Number of Sequences: 59808
Number of extensions: 224732
Number of successful extensions: 814
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 789494848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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