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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0026
         (629 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)                        52   3e-07
SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   1e-06
SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)            47   1e-05
SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)             37   0.016
SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.036
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.58 
SB_58318| Best HMM Match : K-box (HMM E-Value=5.6)                     31   1.0  
SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61)                  30   1.3  
SB_14686| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_56973| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)                   28   5.4  
SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)              28   5.4  
SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)           27   9.5  
SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  
SB_44857| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  
SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  
SB_31032| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.5  

>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
          Length = 387

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 22/62 (35%), Positives = 40/62 (64%)
 Frame = +1

Query: 283 EASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 462
           E + + KL L+ WCPD  ++K +M+ +++F  +KK   G  K ++  + SE S EA++E+
Sbjct: 323 EGADRSKLVLIFWCPDNCEIKSRMVSAATFQDVKKKCPGGAKCLEIQERSELSFEALKEE 382

Query: 463 LR 468
           L+
Sbjct: 383 LK 384


>SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 140

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 22/62 (35%), Positives = 38/62 (61%)
 Frame = +1

Query: 283 EASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 462
           E +++ KL L+ WCPD   +K KM+ +++F  + K   G  K ++  D  + S EA++EK
Sbjct: 76  EGAERSKLVLIFWCPDNCGIKNKMVSAATFKEVMKKCPGGAKCLEIQDRFDLSFEALKEK 135

Query: 463 LR 468
           L+
Sbjct: 136 LK 137


>SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)
          Length = 310

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 22/58 (37%), Positives = 33/58 (56%)
 Frame = +1

Query: 262 HQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSE 435
           H+ Q    A      FL   C D A +KKKML  S+++ LKK   G++KY +A+++ E
Sbjct: 241 HKTQDHRSALSDLVFFLFDRCSDEAPIKKKMLAGSTWEYLKKKFDGLKKYFEASEICE 298


>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
          Length = 151

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +1

Query: 304 LFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRAT 474
           L  +SWC D A ++KKM  +S+ D ++K        + A D  +   + +  K   T
Sbjct: 93  LVFISWCSDKAPIEKKMKLASTQDYVRKKFSEATTSVNANDFDDLDYDEIAAKAEKT 149



 Score = 29.1 bits (62), Expect = 3.1
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
 Frame = +2

Query: 47  SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGERNAEYEQ--FLED 205
           SG+ V D      + +K  K H+Y +F I DE  + V     ++V     E ++  F + 
Sbjct: 4   SGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIFYQM 63

Query: 206 LQKGGTGECRYGLFD 250
           ++K    E RY L+D
Sbjct: 64  VEKLSDREPRYILYD 78


>SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 150

 Score = 35.5 bits (78), Expect = 0.036
 Identities = 16/53 (30%), Positives = 31/53 (58%)
 Frame = +1

Query: 304 LFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEK 462
           L  + WC D A +KK+M+ +++ + LK   V V+K  Q  D ++ + + + +K
Sbjct: 93  LVYIFWCSDNAPIKKRMVSAATNELLKTKFV-VKKVFQINDRADLNYDDIADK 144



 Score = 33.5 bits (73), Expect = 0.14
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
 Frame = +2

Query: 47  SGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGERNAEYEQ 193
           SG+ + D     Y+ ++ K+K H++  F I D+          K++D  T  E  A ++Q
Sbjct: 4   SGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAIFDQ 63

Query: 194 FLEDLQKGGTGECRYGLFDFD 256
            LE L      E RY L+D +
Sbjct: 64  MLEKL---SDSEPRYILYDLN 81


>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 302

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = +3

Query: 396 RSSEVHPSDRP-LGSVSGGRRREAPRHRSPINS-IYTRARTKPNPLSDTPALTTRGHDTT 569
           RSS + P  R  LGS++   R   PR RS + S   +R RT   P + +   ++R     
Sbjct: 183 RSSSISPGMRSSLGSIAPPPRTSTPRSRSTLRSRAGSRIRTPSTPTTTSSRASSRESARG 242

Query: 570 SRLVLITKE 596
           +R    TK+
Sbjct: 243 TRTTTTTKK 251


>SB_58318| Best HMM Match : K-box (HMM E-Value=5.6)
          Length = 584

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 447 GRRREAPRHRSPINSIYTRARTKPNPLSDTPALTTRGHDTTS 572
           GRR++ P    P NS+++  R +P+   +  A T RG D ++
Sbjct: 65  GRRQKGPESLDPENSLFSLRRRRPSSFPNVDA-TLRGQDISA 105


>SB_27884| Best HMM Match : Pox_A32 (HMM E-Value=0.61)
          Length = 1226

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/52 (34%), Positives = 21/52 (40%)
 Frame = -2

Query: 472  WRGASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTT 317
            W G + R PP      RS+  TS L   TF ERR           W  P T+
Sbjct: 855  WGGTAERPPPRQSAPSRSMAITSLLCGSTF-ERRTTVLSMGVVSDWSIPATS 905


>SB_14686| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 316

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 28/113 (24%), Positives = 47/113 (41%)
 Frame = -1

Query: 626 VKSIILILFVFLCN*Y*AASGVVAACRQGRSVGERVRFRPSSCVNAVYWRSVARSFSSTA 447
           V ++ILI+ ++ CN     S ++        +G  +  +P +    V     + SF S  
Sbjct: 48  VSNLILIIAIWSCNSMRTPSNIIICSLACSDIGVGLLAQPLAVAKTVIEAKASSSFDSFC 107

Query: 446 S*DASERSVAWMYF*TPTRDFFRASNELEYNIFFLTLAVSGHHDIRKSFCFLL 288
           S   S R V+ +YF   +   F A +  +Y +  L L        R+   FLL
Sbjct: 108 SIHKSSR-VSSVYFCVVSFVCFTAVSLDKYLMVLLHLRYHELVTTRRVIVFLL 159


>SB_56973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 628

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = -2

Query: 334 RCPGTTTSG-RASVSC*PPTCPGTGACIK 251
           +CP T + G R  V C P  CP T  C K
Sbjct: 484 QCPKTLSCGHRCGVECHPGACPDTLVCSK 512


>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2480

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 19/56 (33%), Positives = 22/56 (39%)
 Frame = -2

Query: 466 GASLRRPPETLPRGRSLGCTSELRQGTFSERRXXXXXXXXX*PWRCPGTTTSGRAS 299
           G + R PP      R +  TS L   TF ERR           W  P T  +G AS
Sbjct: 651 GTAERLPPRQSAPSRFMAITSLLCGSTF-ERRTTVLSMGVVSDWSVPATRCAGTAS 705


>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
          Length = 1514

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 396  RSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARTKPNPLSDTPALTT 551
            R     PS   LGS++   R   PR RS   S  +R+RT+      TP+ T+
Sbjct: 1344 RQQRRRPSPSSLGSLAPPSRTSTPRSRSTPRS-RSRSRTRTPSTPFTPSTTS 1394


>SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)
          Length = 643

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 177 TPNTNSSSRICRRAVPGNADMAC 245
           +P T  SSR C   VPG+AD  C
Sbjct: 14  SPRTGRSSRSCSIPVPGHADHHC 36


>SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1690

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/60 (31%), Positives = 31/60 (51%)
 Frame = +1

Query: 373 DALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ*TAFTHELGRNRTRSPTLLP*RH 552
           D LKK +  +QK     +L +AS E  EEK +  +   + F H++  N+  +   +P RH
Sbjct: 403 DGLKKRMEQIQK-----ELQQASSELEEEKKKTENLLSSIFPHDVA-NKLINKQPIPARH 456


>SB_58198| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)
          Length = 816

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +3

Query: 171 NATPNTNSSSRICRRAVPGNADMACL--TLIHAPVPGHVGG*QETEALPDVVVPGH 332
           N   NT+++SR    AV G  D  CL  T++H   P  V     T++L DVV+  H
Sbjct: 137 NMDMNTDTNSRGPHPAVTGFCDQFCLTNTIVH---PTRVA--SSTKSLLDVVLVSH 187


>SB_57558| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 733

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 23/71 (32%), Positives = 28/71 (39%)
 Frame = +3

Query: 372 RRSEKVPCRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSIYTRARTKPNPLSDTPALTT 551
           RRS + PCR S    +D  LG     R     R  SP  S  T    + +      AL  
Sbjct: 238 RRSSEAPCRQSRRSSNDARLGQFVEKRNFHGNRFVSPKKSKKTEVNREDSIEQYLEALQQ 297

Query: 552 RGHDTTSRLVL 584
               +TSRL L
Sbjct: 298 EA--STSRLKL 306


>SB_44857| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 160

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = -3

Query: 492 CCLLAIGGAELLFDGLLRRFREVGRLDVLLNSDKGLFQS---VERARVQHLLLNLGG 331
           CC+L +   E L    +     +GR D   + + G F     +   R +HL+  +GG
Sbjct: 85  CCILRMSMTEALAGATINAAASLGRADTHGSLEVGKFADMVVINAERWEHLIYQIGG 141


>SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 625

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -3

Query: 498 CKCCLLAIGGAELLFDGLLRRFREVGRLDVLLNSDKGLFQS 376
           C  CLL  G  + L DGL RR    G ++VLL  D G  +S
Sbjct: 348 CIACLLFGGSRKRLPDGLTRR----GDINVLLLGDPGTAKS 384


>SB_31032| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1008

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 567 WCRGRVSSGQECRRAGSVS 511
           W RGR SS  +CRR  S S
Sbjct: 888 WPRGRASSKNDCRRCSSCS 906


>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4865

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -2

Query: 262  ACIKVKQAISAFPGTALLQILEELFVFGVAFANRLDVDLFLVTDV 128
            ACIK     +      +LQ +E  F+  + F+ + + D+F+V D+
Sbjct: 4146 ACIKKDAVRNVLRELEILQTIEHPFIVNLWFSFQDEEDIFMVVDL 4190


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,202,874
Number of Sequences: 59808
Number of extensions: 367475
Number of successful extensions: 1317
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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