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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0013
         (769 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)              72   4e-13
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)              49   5e-06
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)                 45   6e-05
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)                     44   2e-04
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)                       43   3e-04
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)               42   5e-04
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)                   39   0.004
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)                 36   0.048
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)                  35   0.083
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)                       34   0.11 
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)                       33   0.25 
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)                32   0.44 
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)                 32   0.59 
SB_38710| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-09)                 32   0.59 
SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69)                    32   0.59 
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)                 32   0.59 
SB_10830| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.77 
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.0  
SB_51024| Best HMM Match : 7tm_1 (HMM E-Value=5.8e-08)                 31   1.4  
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.4  
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)                   30   2.4  
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.4  
SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.1  
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)                 29   4.1  
SB_23686| Best HMM Match : NHL (HMM E-Value=2.7e-07)                   29   4.1  
SB_20194| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_16980| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.5  
SB_29494| Best HMM Match : Mpp10 (HMM E-Value=0.62)                    28   7.2  
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)                 28   7.2  
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)                      28   7.2  
SB_28489| Best HMM Match : SAB (HMM E-Value=6)                         28   7.2  
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)             28   9.5  
SB_15552| Best HMM Match : SCP (HMM E-Value=3.6)                       28   9.5  
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  

>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 435

 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 35/82 (42%), Positives = 48/82 (58%)
 Frame = +1

Query: 517 QVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
           +VK D  T  S+GFGF++F + E     L   H I GR C+VR+P  K+      +K+FV
Sbjct: 145 EVKLDPNTRRSRGFGFVRFKKDEDAKNVLSTSHRIQGRLCEVRLPRPKE-ELNVPKKLFV 203

Query: 697 GRCTENITAEDLREYFGSFGQV 762
           GR  E+ T + L EYF  FG+V
Sbjct: 204 GRLPESTTEKTLMEYFAQFGEV 225



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 15/26 (57%), Positives = 22/26 (84%)
 Frame = +2

Query: 431 DLIVLGLPWKTTEEAVRDYFSSFGDL 508
           DLIVLGLP+ TTE  +++YF+ FG++
Sbjct: 116 DLIVLGLPYATTESEMKEYFTRFGEI 141



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
 Frame = +3

Query: 168 MTE-YVPVSEGEQ--DEPIELPTEEDGSLLLS 254
           MT+ YV V + E   D+ IE+  EEDG+LLLS
Sbjct: 1   MTQIYVRVVDDETCPDQAIEIEAEEDGTLLLS 32


>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 299

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
 Frame = +1

Query: 529 DTRTGLSKGFGFIKFAEYEAQLRALGRR-----HMIDGRWCDVR--IPNGKDGSSTAH-- 681
           D+ T  S+GFG++ FA+Y+     L  +     H IDG+  +V+  IP   D S+T+H  
Sbjct: 48  DSATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPR-DDNSATSHEK 106

Query: 682 -RKVFVGRCTENITAEDLRE 738
            +K+FVG   E+ T ED++E
Sbjct: 107 TKKIFVGGLPEDATKEDIQE 126



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 395 RAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
           R E+    PR   L V GL  +TT E +R+YF ++G+L
Sbjct: 4   RQENTNNDPRAK-LFVGGLNRETTNETLREYFEAYGEL 40



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 685 KVFVGRCTENITAEDLREYFGSFGQV 762
           K+FVG      T E LREYF ++G++
Sbjct: 15  KLFVGGLNRETTNETLREYFEAYGEL 40


>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
          Length = 496

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
 Frame = +1

Query: 535 RTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVR--IPNGKDGSSTAH---RKVFV 696
           R G S+GFGF+ +   ++    L ++ H++D R  + +  +P  + G+  A    RK+FV
Sbjct: 84  RDGRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFV 143

Query: 697 GRCTENITAEDLREYFGS 750
           G        ED++EYF S
Sbjct: 144 GGLASTTVEEDIKEYFNS 161



 Score = 34.7 bits (76), Expect = 0.083
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +2

Query: 350 PAEGWPAYRYWCAFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
           P + + A R +   P   S   + R   + + GL W TTEE ++DYFS +G +
Sbjct: 26  PFQCFSASRPFALLPSKMSESEKLR--KIFIGGLNWNTTEEGLKDYFSQWGTI 76



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 658 KDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
           K   S   RK+F+G    N T E L++YF  +G +
Sbjct: 42  KMSESEKLRKIFIGGLNWNTTEEGLKDYFSQWGTI 76


>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
          Length = 145

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +1

Query: 532 TRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRW 633
           T+TG SKGFG++ +   E+  RAL   H+IDG+W
Sbjct: 97  TQTGKSKGFGYVTYENAESAQRALAGTHIIDGKW 130


>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
          Length = 420

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 25/84 (29%), Positives = 43/84 (51%)
 Frame = +1

Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSSTAHRKVF 693
           V++ R T  G S+ +GF+ F +       L + H+I+G+  DV       G S   R ++
Sbjct: 109 VRIMR-TFLGYSRNYGFVLFKDDGPSKEVLKKSHVINGKTVDV-------GKSRNFRVIY 160

Query: 694 VGRCTENITAEDLREYFGSFGQVQ 765
           VG    + T + +RE+F  FG ++
Sbjct: 161 VGGLPSHFTEQTVREHFKKFGVIE 184



 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 646 IPNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
           +P+ KD    + R VFVG        E L++YF  FG+V+
Sbjct: 69  LPSPKDIEKNS-RSVFVGGLASGTDEEGLKDYFEQFGEVE 107



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +2

Query: 365 PAYRYWCAFPRAESPPPRPR-----CSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
           PA +   A  R  S  P P+        + V GL   T EE ++DYF  FG++
Sbjct: 54  PASKPLVAVSRYNSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEV 106


>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
 Frame = +1

Query: 529 DTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGRWCDVR--IPNG-----KDGS----- 669
           + R  + KGFGF+ F +       L ++ H++DG+  D +  +P G     + G+     
Sbjct: 135 ERRARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVMGGP 194

Query: 670 ---STAHRKVFVGRCTENITAEDLREYFGSFGQVQM 768
              S    KVF+G      T EDL+EYF ++G V++
Sbjct: 195 QRGSANDGKVFIGGLAFGTTEEDLKEYFSTYGMVEV 230



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +2

Query: 410 PPRPRCSD--LIVLGLPWKTTEEAVRDYFSSFG 502
           P R   +D  + + GL + TTEE +++YFS++G
Sbjct: 194 PQRGSANDGKVFIGGLAFGTTEEDLKEYFSTYG 226


>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
          Length = 842

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +1

Query: 520 VKRDTRTGLSKGFGFIKFAEYEAQLRALGR-RHMIDGRWCDVRIPNGKDGSSTAHRKVFV 696
           V RD  T  S+GFGF+ F + +A    L      +DG+              T  +K+F+
Sbjct: 139 VMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK-----------KMVTTTKKIFI 187

Query: 697 GRCTENITAEDLREYFGSFGQV 762
           G  + N + ED+++YF  FG+V
Sbjct: 188 GGLSTNTSEEDMKKYFSQFGKV 209


>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
          Length = 343

 Score = 35.5 bits (78), Expect = 0.048
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +1

Query: 532 TRTGLSKGFGFIKFAEYEAQLRALGR-RHMIDGRWCDVRIPNGKDGSSTAHRKVFVGRCT 708
           T +G SKGF F++  + EA    LGR  H+ID    DV +          +RKV +    
Sbjct: 77  TLSGKSKGFAFVRLRKKEAVESVLGRDDHVIDN--SDVSME-----KQDTYRKVILKNIP 129

Query: 709 ENITAEDLREYFGSFGQV 762
            +I    + E+F S G++
Sbjct: 130 SSIGESQILEHFSSSGEI 147


>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
          Length = 328

 Score = 34.7 bits (76), Expect = 0.083
 Identities = 27/100 (27%), Positives = 44/100 (44%)
 Frame = +1

Query: 448 LTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDG 627
           L+ E  + S           V V +K D  TG  +GF F++F +++++  A+  +     
Sbjct: 36  LSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQF-KHQSEADAIDPKPAA-- 92

Query: 628 RWCDVRIPNGKDGSSTAHRKVFVGRCTENITAEDLREYFG 747
                  P GK       +K+FVG      + E +REYFG
Sbjct: 93  -------PIGKPPHLRV-KKIFVGGLKPETSDEKIREYFG 124



 Score = 32.3 bits (70), Expect = 0.44
 Identities = 12/25 (48%), Positives = 21/25 (84%)
 Frame = +2

Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
           L V GL ++TT+E++++YFS +G+L
Sbjct: 31  LFVGGLSYETTKESLKEYFSKYGEL 55



 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 685 KVFVGRCTENITAEDLREYFGSFGQV 762
           K+FVG  +   T E L+EYF  +G++
Sbjct: 30  KLFVGGLSYETTKESLKEYFSKYGEL 55


>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
          Length = 514

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +1

Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRI-PNGKDGSSTAH 681
           VQ+  D+ T  SKG+GF++F E EA  RA+ + +  +     ++I P  + G S+A+
Sbjct: 271 VQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKIGPVTERGDSSAY 327


>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
          Length = 382

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +1

Query: 517 QVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
           ++ RD+ TG SKGF FI FA ++A   A+
Sbjct: 131 KIMRDSDTGNSKGFAFINFASFDASDAAI 159


>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
          Length = 672

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 16/64 (25%), Positives = 31/64 (48%)
 Frame = +1

Query: 430 RSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGR 609
           R +   L  E    S TR       F+  ++ RD ++  SKG+GF+ F +    ++A+  
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMRE 277

Query: 610 RHMI 621
            +++
Sbjct: 278 MNVL 281


>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
          Length = 407

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +1

Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWCDVRIPNGKDGSST 675
           V++ RD +TG+ KGFG++ F   +A + AL + +  + +   +R+   KD   T
Sbjct: 85  VRLIRDRKTGIGKGFGYVLFESKDAVVFAL-KMNNAEFKGRKIRVFPSKDKPQT 137


>SB_38710| Best HMM Match : 7tm_1 (HMM E-Value=4.6e-09)
          Length = 435

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 215 NGLVLLALAYRHVLRHLAHRPTLTFHFLISFIYSHGFETLVKS 87
           NG+VL  +  R V+   A + TLT HF+ S  YS    +LV +
Sbjct: 67  NGMVLYLVKQRPVVSRRAFQRTLTRHFIRSLAYSSLLSSLVST 109


>SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69)
          Length = 166

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +1

Query: 526 RDTRTGLSKGFGFIKFAEYEAQLRALGRR-HMIDGR 630
           +D ++G SK +GF+ F + EA  +A+G + H I+G+
Sbjct: 95  KDLKSGRSKKYGFVFFKDEEACEKAMGNQPHFIEGQ 130


>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
          Length = 291

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +1

Query: 520 VKRDTRTGLSKGFGFIKFAEYE-AQLRALGRRHMIDGRWCDVRI 648
           V +D  T  SKG+GF+  A  + A+L    +R MI+GR  +V +
Sbjct: 41  VIKDRVTKKSKGYGFVTMATSDAAELACKNKRPMIEGRQANVNL 84



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 9/25 (36%), Positives = 20/25 (80%)
 Frame = +2

Query: 434 LIVLGLPWKTTEEAVRDYFSSFGDL 508
           L V G+P+++ ++A+R +F+ FG++
Sbjct: 12  LFVGGIPYESGDDALRKFFAQFGEI 36


>SB_10830| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1006

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = +1

Query: 430 RSYSSRLTMEDDRRSCTRLLL-LLWRFVMVQVKRDTRTGLSKGFGFIK 570
           R   +RLT++ + ++  RLLL +L R+V +++K D  +G+S+   F K
Sbjct: 361 RCIEARLTIQKENQNQERLLLSVLPRYVAMEMKDDIESGISQNSQFHK 408


>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 550

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 386 AFPRAESPPPRPRCSDLIVLGLPWKTTEEAVRDYFSSFGDL 508
           + P  ++P  R   + L V GL  K TE+ +RD+F  FG+L
Sbjct: 291 SMPMLDTPTDRS-ITTLYVGGLEGKVTEQDLRDHFYQFGEL 330


>SB_51024| Best HMM Match : 7tm_1 (HMM E-Value=5.8e-08)
          Length = 342

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 215 NGLVLLALAYRHVLRHLAHRPTLTFHFLISFIYSHGFETLVKS 87
           NG+VL  +  R V+   A + TLT HF+ S  YS    +LV +
Sbjct: 28  NGMVLYLVKQRPVVSRRALQRTLTRHFIRSLAYSSLLTSLVST 70


>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1309

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 649 PNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
           P  K G +  H  +FVG   EN+    LR+ F  FG++
Sbjct: 447 PGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGEI 484



 Score = 28.3 bits (60), Expect = 7.2
 Identities = 23/75 (30%), Positives = 33/75 (44%)
 Frame = +1

Query: 379 LVCLPTRGIAAASTTMLRSYSSRLTMEDDRRSCTRLLLLLWRFVMVQVKRDTRTGLSKGF 558
           +V +P +     S     S+    T  DD  S T   L + R   V+V +D     SKGF
Sbjct: 499 MVFVPEKLSKPTSRLYFWSFHEWSTFLDDIFSYTVPDLFVAR--EVRVVKDPAKNKSKGF 556

Query: 559 GFIKFAEYEAQLRAL 603
           GF+ F   E   +A+
Sbjct: 557 GFVSFVRREDAAKAI 571


>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
          Length = 255

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 664 GSSTAHRKVFVGRCTENITAEDLREYFGSFGQVQ 765
           G     RK+FVG  +++   EDLR  F  FG ++
Sbjct: 208 GQHKDDRKLFVGMISKHAKEEDLRVMFSPFGTIE 241


>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 138

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 685 KVFVGRCTENITAEDLREYFGSFGQV 762
           KVFVG     + A +L+++FG FG V
Sbjct: 80  KVFVGNIGFKVRARELKDFFGYFGDV 105


>SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 623

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 697 RRIPFDEPSTSRPCRS-GCE-HRTSARLSCV 611
           RRIP +EP+   P R  G E HRT A + CV
Sbjct: 144 RRIPREEPAPGLPLREMGSEIHRTGAFIDCV 174


>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1218

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 20/68 (29%), Positives = 32/68 (47%)
 Frame = +3

Query: 51  DLQNNILLIQELGLNQSLKAVRVDKRDEEVEGQRWSVSKMTEYVPVSEGEQDEPIELPTE 230
           D++   L  QEL +   L+     + +EE+  Q   ++K+TE V   E E  E  +   E
Sbjct: 477 DIKELTLKDQELDVTVELRGAEKQQLEEEILNQTHQITKLTEQVTGLETEIKEVRQQKDE 536

Query: 231 EDGSLLLS 254
            +  L LS
Sbjct: 537 INVHLSLS 544


>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
          Length = 260

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +1

Query: 649 PNGKDGSSTAHRKVFVGRCTENITAEDLREYFGSFGQV 762
           P+ ++G S+  +++ V          DLR+ FGSFG +
Sbjct: 57  PSAENGDSSGPKRLHVTNIPFRFRDNDLRQMFGSFGVI 94


>SB_23686| Best HMM Match : NHL (HMM E-Value=2.7e-07)
          Length = 1055

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +3

Query: 3   HVIRHIRHEYYKNFWLDLQNNILLIQELGLNQSLKAVR-VDKRDEE 137
           H I+ +R   +  +W+D+   ++ ++E+  N S+KAVR  D+ D E
Sbjct: 507 HNIKRVRSAEFW-YWVDINGYLVNMEEMKRNVSMKAVRNKDRMDVE 551


>SB_20194| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 846

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +1

Query: 469 RSCTRLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGR 630
           RS  RL  L W  ++V+ +R  R G  +  G ++   ++     LGRRH    R
Sbjct: 717 RSPHRLQGLFWSGLVVEFERVLRQGSHRSTGTLRGRCHQRMQSRLGRRHQATTR 770


>SB_16980| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 478

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 675 RRRAVLAVRDANIAPAPVYHVSAA*CTQLSFVLGEFDEAKTFG 547
           RR+ +L+  D N AP P   +S   CT     L E D++  FG
Sbjct: 328 RRQEILSCYDGNRAPRPSTALSTDKCTLAKKGLPERDQSAMFG 370


>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 781

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 514 VQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
           VQ+ RD +T  +KG+G++KF +      AL
Sbjct: 82  VQIVRDHKTRENKGYGYVKFHKSSTAAMAL 111


>SB_29494| Best HMM Match : Mpp10 (HMM E-Value=0.62)
          Length = 631

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +3

Query: 87  GLNQSLKAVRVDKRDEEVEGQRWSVSKMTEYVPVSEGEQDEPIELPTEEDG 239
           GL Q    V V  +D E+E Q  S S   +     E E + P E   +EDG
Sbjct: 163 GLEQREDDVEVMDQDSEIEDQEGSESMDEDQGDEDEVEDEVPEEGDNDEDG 213


>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
          Length = 159

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 508 VMVQVKRDTRTGLSKGFGFIKFAEYEAQLRAL 603
           V V+V  D  TG  +GFGF+ F   E   +A+
Sbjct: 31  VDVKVITDRETGRPRGFGFVTFGSKEEMEKAI 62


>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 314

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 664 GSSTAHRKVFVGRCTENITAEDLREYFGSF 753
           G  +   K+FVG   E+ T E +R YF SF
Sbjct: 2   GDDSKLMKLFVGGLNEDTTEETVRAYFKSF 31


>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
          Length = 1066

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 407 PPPRPRCSDLIVLGLPWKTT 466
           P P  RC  L +L +PWK T
Sbjct: 914 PDPSARCDPLSILAVPWKWT 933


>SB_28489| Best HMM Match : SAB (HMM E-Value=6)
          Length = 149

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +1

Query: 481 RLLLLLWRFVMVQVKRDTRTGLSKGFGFIKFAEYEAQLRALGRRHMIDGRWC 636
           R L LLW+  +VQ+       +      +  A+ +AQ     +RH I  RWC
Sbjct: 78  RELKLLWKRRVVQILPIVIVAVGTVPAGLMLAQSQAQGPRSNKRHSIQRRWC 129


>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
          Length = 1531

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 682 RKVFVGRCTENITAEDLREYFGSFGQVQ 765
           R ++VG   ENI  ED+ ++F  +G+V+
Sbjct: 6   RHLWVGNLPENIREEDIVKHFTRYGRVE 33


>SB_15552| Best HMM Match : SCP (HMM E-Value=3.6)
          Length = 154

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 558 WLHQIRRVRSSTACIRPPTH 617
           W+ Q+ + +SS AC  PP H
Sbjct: 87  WIGQLGKYKSSGACTNPPAH 106


>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3934

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/55 (25%), Positives = 31/55 (56%)
 Frame = +3

Query: 66  ILLIQELGLNQSLKAVRVDKRDEEVEGQRWSVSKMTEYVPVSEGEQDEPIELPTE 230
           ++ + E+GL ++L +VR+D +DEE+   +  +    E V   +    + +E+ T+
Sbjct: 676 VMQVAEIGLAKAL-SVRLDSKDEEIAELQKKLDFAKEQVQALKNADVKTVEMETK 729


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,797,848
Number of Sequences: 59808
Number of extensions: 461323
Number of successful extensions: 1759
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1754
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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