Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0039
(692 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.072
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 32 0.38
SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) 31 0.89
SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008) 31 0.89
SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035) 31 0.89
SB_5147| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_22845| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_47152| Best HMM Match : Vicilin_N (HMM E-Value=5.4) 28 6.2
SB_42834| Best HMM Match : C2 (HMM E-Value=3.7e-20) 28 8.3
SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10) 28 8.3
SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74) 28 8.3
SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_23195| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-10) 28 8.3
SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59) 28 8.3
SB_23686| Best HMM Match : NHL (HMM E-Value=2.7e-07) 28 8.3
>SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 34.7 bits (76), Expect = 0.072
Identities = 25/121 (20%), Positives = 57/121 (47%)
Frame = -3
Query: 558 RQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKK 379
+Q Q Q + Q+++ QQQ + QL+ + + + ++Q L++ ++ ++
Sbjct: 10 QQQQQQLQQQQQQQQLQQQQQQQQQLQQQQQQQQLLQQQQQQQQQLQQQQQQQQQLQQQQ 69
Query: 378 ILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRR 199
+ +L++ QP ++ ++ R Q + QQ R ++QQ RL+Q ++
Sbjct: 70 QQQPRLQQQQQQQPRLKQQQQQQPRLKQQQQQPRLKQQQQQQPRLKQQQQQ-PRLQQQQQ 128
Query: 198 Q 196
Q
Sbjct: 129 Q 129
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/122 (18%), Positives = 61/122 (50%)
Frame = -3
Query: 558 RQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKK 379
+Q Q+Q++ Q+++ QQQ + L+ + + + + ++Q L++ + ++
Sbjct: 21 QQQQLQQQQQQQQQL-QQQQQQQQLLQQQQQQQQQLQQQQQQQQQLQQQQQQQPRLQQQQ 79
Query: 378 ILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRR 199
+ +L++ QP ++ ++ + + Q + QQ + +Q+QQ RL+Q ++
Sbjct: 80 QQQPRLKQQQQQQPRLKQQQQQPRLKQQQQQQPRLKQQQQQPRLQQQQQQP--RLKQQQQ 137
Query: 198 QR 193
Q+
Sbjct: 138 QQ 139
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/105 (20%), Positives = 55/105 (52%)
Frame = -3
Query: 456 RRWLEHREQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*H 277
R+ ++ +E+ R+++ + + +K+L++Q E+ Q E+RH++ + ++ +
Sbjct: 353 RKLIQQQEELKQRELLKQQEVKKQQKLLKQQ-ERLK-QQEEIRHRQLLKEQEELKHRKLL 410
Query: 276 MSMLVQQHKRRQEQQWS**RLEQHRRQRCGHRERCELSKKRPKTQ 142
QHK+ QE++ + E+ ++Q H++ E K + + Q
Sbjct: 411 QEQQKLQHKKLQEEKLKHQKQEEEQQQLQHHKQEEEQLKHQQEQQ 455
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 278 CYWPSIFVRRCTIVRLCRISGCDQDHFS 361
C P+ RRC R C +SGC + H S
Sbjct: 785 CLLPNHISRRCKTYRACLVSGCSEKHHS 812
>SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)
Length = 599
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = -3
Query: 531 QRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKKILRKQLEKW 352
+R+R+ + + R ++L R + M REQ +LRK +I +RL + R++ ++W
Sbjct: 134 RRQRAKMEAEQRRQAELEKQRQQQMEM---EREQEVLRKQMIQQRLQAQIEAERQRQKEW 190
Query: 351 SWSQ-PEMRHKRTMVQRRTNMLGQ 283
+ E+ +++ + Q N L Q
Sbjct: 191 QKRKVEELLNQKGLEQDIVNNLKQ 214
>SB_32407| Best HMM Match : WSC (HMM E-Value=0.0008)
Length = 832
Score = 31.1 bits (67), Expect = 0.89
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Frame = -3
Query: 672 QRHR*IQRGQRKVLRKNHHGLW*RSKMTQKILQD*WSWRQPQVQRKLQRERSP*QQQARS 493
+R R ++R +++ L K + K L++ W RQ Q+ R+ + R + + +
Sbjct: 224 RRKRHLERQRQRYLEKLRRLKHEKHLRRLKRLREQWGRRQRQLAREKRIRR---ENKRKE 280
Query: 492 TSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTM 313
+LR R + M R L R+ R+ + ER+ K++ +L K + KR
Sbjct: 281 RERLRRERVKLMER-LRRRKLERARR-IRKERM---KRLQMMKLRKILLERKRRAAKRAR 335
Query: 312 VQRRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHR-RQRCGHRERCEL 166
++ M + +Q +RR+ Q + L+ R RQR G + R +
Sbjct: 336 IRHEKLMRKLRLQQKMEEQRRRRRAHQIAQRLLKLKRERQRAGAKRRAAI 385
>SB_54444| Best HMM Match : zf-CCHC (HMM E-Value=0.035)
Length = 671
Score = 31.1 bits (67), Expect = 0.89
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 278 CYWPSIFVRRCTIVRLCRISGCDQDHFS 361
C P+ RRC + C +SGC + H S
Sbjct: 154 CLLPNHISRRCKTYKACLVSGCSEKHHS 181
>SB_5147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 456 RRWLEHREQSMLRKMVIHERLWTSKKILRKQLEK 355
R W+ +E + + + LW S+KIL+ QLEK
Sbjct: 169 RSWISEQELEDIDEEIRRLELWLSRKILKHQLEK 202
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -3
Query: 336 EMRHKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRRQRCGHRERCELSKK 157
+ +H+R Q+ Q H Q+H+RR +Q ++H+R++ RER + ++
Sbjct: 154 DKKHQRRHRQKHQRRNRQKHQRRQRQEHQRRHRRQHQRRHRQKHQRRQHQRRER-QKQQQ 212
Query: 156 RPKTQ 142
R K Q
Sbjct: 213 RQKQQ 217
>SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 452 RRILRPRYTRSCDVLRACCC*GDRSRCSLRCTCGCLQDHQSCSIFC 589
R I P +++C L C C G +RC C++ H C++ C
Sbjct: 785 RWITIPEVSKACSELTKCSCKGVCTRCK------CIKAHLECTLLC 824
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/109 (25%), Positives = 54/109 (49%)
Frame = -3
Query: 558 RQPQVQRKLQRERSP*QQQARSTSQLRV*RGRSMRRWLEHREQSMLRKMVIHERLWTSKK 379
RQ Q QR+ QR+R +Q+ R + R + + R+ HR++ R +R ++
Sbjct: 9 RQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRHRQRQRQR-----QRQRQRQR 63
Query: 378 ILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQ 232
++Q ++ Q + + +R QR+ L Q L Q+ ++RQ+Q+
Sbjct: 64 QRQRQRQRQRQRQRQRQRQR---QRQRQRLRQ--RQRLRQRQRQRQQQR 107
Score = 29.5 bits (63), Expect = 2.7
Identities = 28/101 (27%), Positives = 45/101 (44%)
Frame = -3
Query: 327 HKRTMVQRRTNMLGQ*HMSMLVQQHKRRQEQQWS**RLEQHRRQRCGHRERCELSKKRPK 148
HK+ QR+ Q Q+ ++RQ Q+ R Q +RQR HR+R +++ +
Sbjct: 2 HKQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQ-RQRQRQRQRQRHRQRQRQRQRQRQ 60
Query: 147 TQLD*WF*LPQQEPR*RGCKPREQLRGDHQRGLRLQRTEQR 25
Q +Q R R + + Q + QR + QR QR
Sbjct: 61 RQ--------RQRQRQRQRQRQRQRQRQRQRQRQRQRLRQR 93
>SB_22845| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1422
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = -3
Query: 429 SMLRKMVIH-ERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQH 253
+++ +IH E +T+ + +Q+E Q E+ H+R ++ +R ++ + QQH
Sbjct: 1105 ALMHPFLIHRESPFTAHHLGDRQVEMMRERQ-ELLHQRLIMDQREHIKAREEEWQRRQQH 1163
Query: 252 KRRQEQQWS**RLEQHRRQRCGHRERCELSKKRPKTQ 142
R QE++ L Q+R Q E + +RP ++
Sbjct: 1164 LR-QEKEDRQRELSQYRHQVLHRHEHMGMEPRRPASK 1199
>SB_47152| Best HMM Match : Vicilin_N (HMM E-Value=5.4)
Length = 330
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 219 RLEQHRRQRCGHRERCELSKKRPKTQ 142
R H R+ C +R+R L+ KRPKT+
Sbjct: 192 RHSHHYRRICRYRQRRPLTPKRPKTR 217
>SB_42834| Best HMM Match : C2 (HMM E-Value=3.7e-20)
Length = 808
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -3
Query: 267 LVQQHKRRQEQQWS**RLEQHRRQRCGHRE 178
L QQ ++Q+QQ +L+QH++Q+ HR+
Sbjct: 38 LKQQQMQKQQQQHLQQQLQQHQQQQMQHRD 67
>SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10)
Length = 1303
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 329 GISVRWCSGVRICWASSI*VCWCSSIRDGRSSNGLSEDWSST 204
G++ WCS R C I CS G SS+ ++ +W T
Sbjct: 932 GVTCAWCSWFRFCRGCLI---KCSDQEFGNSSSYIAIEWDPT 970
>SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74)
Length = 328
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = +2
Query: 431 CSRCSSHRRILRPRYTRSCDVLRACCC*GDRSRCSLRCTCGCLQDHQSCSIFCVILLLYH 610
C S R +P R+ + CCC RCS+ C C C+ C++
Sbjct: 201 CLDSSPRRSSSKPGPRRADCYVNLCCC--VTCRCSVCTCCPCDCTCLQCAP-CIVFSALC 257
Query: 611 SPWWFL 628
P+W L
Sbjct: 258 CPFWSL 263
>SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = +2
Query: 431 CSRCSSHRRILRPRYTRSCDVLRACCC*GDRSRCSLRCTCGCLQDHQSCSIFCVILLLYH 610
C S R +P R+ + CCC RCS+ C C C+ C++
Sbjct: 201 CLDSSPRRSSSKPGPRRADCYVNLCCC--VTCRCSVCTCCPCDCPCLQCAP-CIVFSALC 257
Query: 611 SPWWFL 628
P+W L
Sbjct: 258 CPFWSL 263
>SB_23195| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-10)
Length = 466
Score = 27.9 bits (59), Expect = 8.3
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
Frame = +2
Query: 434 SRCSSHRRILRPRYTRSCDVLRACCC*GDRSRCSLRCTCGCL--QDHQSCSIFCVILLLY 607
S S RI R T CDV+ C C G R +RC L + C I L
Sbjct: 101 SSSSDSCRICRDS-TAGCDVISPCHCSGTLGRVHVRCLEEWLSASNKNECEICKYEYHLQ 159
Query: 608 HSPWWFLRRTLRCPR 652
+P F R+ L+ PR
Sbjct: 160 RTPKTF-RQWLKNPR 173
>SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59)
Length = 218
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 482 SCDVLR--ACCC*GDRSRCSLRCTCGCLQDHQSCSIF-CVILLLYHSPWWFLRRTLRCPR 652
+C V+R ACC + C +RC C+ +C + CV + R +RC
Sbjct: 37 ACCVMRCVACCVMRCVACCVMRCVACCVMHCVACCVMRCVACRVMRC---VACRVMRCVA 93
Query: 653 CIYLC 667
C +C
Sbjct: 94 CRVMC 98
>SB_23686| Best HMM Match : NHL (HMM E-Value=2.7e-07)
Length = 1055
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 536 LRCTCGCLQDHQSCSIFCVILLLYHSPWWFLRRTLRCPRCI 658
L C C C ++ S+ LLL HS W LRR C C+
Sbjct: 421 LDCICHCDICFENKSVCAQCLLLGHSEWHPLRRP--CLECL 459
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,101,405
Number of Sequences: 59808
Number of extensions: 322772
Number of successful extensions: 1191
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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