Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0026
(630 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 3e-49
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 3e-49
SB_56| Best HMM Match : Actin (HMM E-Value=0) 192 3e-49
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 192 3e-49
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 185 2e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 1e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_54| Best HMM Match : Actin (HMM E-Value=0) 100 1e-21
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 83 2e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 73 3e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 56 2e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 4e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.58
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 31 0.77
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.77
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 31 1.0
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.0
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.0
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.0
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 30 1.3
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.8
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 29 2.4
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 29 2.4
SB_39407| Best HMM Match : TIG (HMM E-Value=0) 29 3.1
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 28 5.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 28 5.4
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 28 5.4
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 5.4
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 28 5.4
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 28 5.4
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 28 5.4
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 28 5.4
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_34900| Best HMM Match : 7tm_1 (HMM E-Value=2.5e-12) 27 9.5
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085) 27 9.5
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 192 bits (467), Expect = 3e-49
Identities = 91/112 (81%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFN+PAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 173
Score = 128 bits (309), Expect = 4e-30
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 192 bits (467), Expect = 3e-49
Identities = 91/112 (81%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFN+PAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 172
Score = 125 bits (302), Expect = 3e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +1
Query: 76 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 192 bits (467), Expect = 3e-49
Identities = 91/112 (81%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFN+PAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 172
Score = 126 bits (305), Expect = 1e-29
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +1
Query: 76 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 192 bits (467), Expect = 3e-49
Identities = 91/112 (81%), Positives = 95/112 (84%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
QIMFETFN+PAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 173
Score = 132 bits (320), Expect = 2e-31
Identities = 60/62 (96%), Positives = 62/62 (100%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 185 bits (451), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 431
+RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 432 QIMFETFNTPAMYVAIQAVLSLYASG 509
QIMFETFN+PAMYVAIQAVLSLYASG
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASG 147
Score = 128 bits (309), Expect = 4e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 70 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 249
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 250 SK 255
SK
Sbjct: 61 SK 62
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 509 RTTGIVLDFGDGVFHTVPIYE 571
RTTGIV+D GDGV HTVPIYE
Sbjct: 148 RTTGIVMDSGDGVSHTVPIYE 168
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 126 bits (305), Expect = 1e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +1
Query: 76 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 255
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 62.1 bits (144), Expect = 4e-10
Identities = 33/58 (56%), Positives = 38/58 (65%)
Frame = +3
Query: 414 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
N + M +IMFETFN+PAMYVAIQAVLSLYASG S + P +GYALP
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 135
Score = 60.9 bits (141), Expect = 8e-10
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +3
Query: 252 QRGILTLKYPIEHGIVTNWDDMEKIWHHTF 341
+RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 109 bits (261), Expect = 2e-24
Identities = 51/115 (44%), Positives = 75/115 (65%), Gaps = 1/115 (0%)
Frame = +3
Query: 246 TEQRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 422
++ R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 423 KMTQIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
KM ++MFE + +Y+AIQAVL+LYA G+ S + CP +G+ALP
Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALP 176
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +1
Query: 88 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 246
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 100 bits (239), Expect = 1e-21
Identities = 49/89 (55%), Positives = 61/89 (68%)
Frame = +3
Query: 321 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 500
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 501 ASGVPPVSCWTSATVSSTPCPFTKGYALP 587
ASG + + S P GY LP
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLP 2217
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 94 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 195
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 82.6 bits (195), Expect = 2e-16
Identities = 39/78 (50%), Positives = 54/78 (69%)
Frame = +3
Query: 369 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVS 548
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+G +
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 549 STPCPFTKGYALPPRHSL 602
S P +G+A+P HS+
Sbjct: 186 SHSVPIYEGFAMP--HSI 201
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/102 (32%), Positives = 57/102 (55%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 458
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 459 PAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYAL 584
PA ++ +VL+ +A+G S ++ P GY L
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVL 104
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 79 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 195
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = +3
Query: 435 IMFETFNTPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPCPFTKGYALP 587
IMFE FN+PA+YVAIQAVLSLYASG + S S P +GYALP
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALP 51
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 234
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 235 GDEAQSK 255
GD A +K
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 273 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 386
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 506 RRTTGIVLDFGDGVFHTVPI 565
R TG V+D GDGV H +P+
Sbjct: 353 RTLTGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 192 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 76
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 270 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 422
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 167 GNTARGASSPAKPALHIPEPLSTT 96
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 167 GNTARGASSPAKPALHIPEPLSTT 96
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 31.1 bits (67), Expect = 0.77
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 506 RRTTGIVLDFGDGVFHTVPIYE 571
R TG V+D GDGV H +P+ E
Sbjct: 59 RTLTGCVIDSGDGVTHVIPVAE 80
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.1 bits (67), Expect = 0.77
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 30.7 bits (66), Expect = 1.0
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = -1
Query: 258 LFALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 94
+FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 93 RGNFFVAHLELVK 55
G V L+ K
Sbjct: 520 HGQVDVLLLDFQK 532
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 167 GNTARGASSPAKPALHIPEPLSTT 96
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 395 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 487
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 279 PIEHGIVTNWDDMEKIWHHTFYNE 350
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 82 EVAALVVDNGSGMCKAGFAGDDAPRAV 162
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -3
Query: 373 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG--YLRVRIPLCSVPHLLHKSPSVPYRPS 200
CS + + C + ++V CS Y+ V +CS + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 199 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 107
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 439 CSKHSTRPPCTSPSKPCSRCTRPAYHRYRAG 531
C H+ R P T+PS PC + Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_39407| Best HMM Match : TIG (HMM E-Value=0)
Length = 1710
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 456 TPAMYVAIQAVLSLYASGVPPVSCWTSATVSSTPC 560
TP + Q V++LY SG P + + T+ ST C
Sbjct: 1300 TPTTILGKQNVITLYGSGFPAKTSDVTVTLGSTAC 1334
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 167 GNTARGASSPAKPALHIPEPLSTT 96
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = -3
Query: 319 SMSSQLVTIPCSMGYLRVRIPLCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHL 140
+++SQ VT M R +PL S P + KSP V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 139 LRNRPCTYRS 110
+ P +Y+S
Sbjct: 845 --HEPGSYKS 852
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 167 GNTARGASSPAKPALHIPEPLSTT 96
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 162 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTEQRGILTLKYPIEHGIVTNW--DDMEKIWHH 335
V L + +GR+ G+ +CR+ + ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 336 TFYN 347
T N
Sbjct: 497 TCPN 500
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +2
Query: 353 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRRTTGIVLD 532
ACR R P P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 533 FGDGVFHTVPI 565
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L LC + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 258 LFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 115
L +C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Frame = -3
Query: 310 SQLVTIPCSMGYLRVRIPLCSVPHLLHKS---------PSVPYRPSRPDGGAFP 176
S+ ++IP G+ R L P L H S P+ PY PS+ G +FP
Sbjct: 3759 SKPISIPSRDGHARAATSLPGSPQLSHLSGRFSSDDVSPTPPYSPSQKQGFSFP 3812
>SB_34900| Best HMM Match : 7tm_1 (HMM E-Value=2.5e-12)
Length = 433
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +3
Query: 423 KMTQIMFETFNTPAMYVAIQ---AVLSLYASGVPPVSCWT-SATVSS 551
K +I+ TF A++ A LY S +PP +CW S T+ S
Sbjct: 217 KNRRIIAMTFTVVALFTLTWGPIATTPLYISAIPPNACWNLSPTIQS 263
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 182 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 72
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 238 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 92
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085)
Length = 350
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 584 KCVSFRKWARCGRHRRRSPARYRWYAGRVQR 492
KC K+ C R+RRR RY++Y G+ +R
Sbjct: 125 KCFCKVKYYHC-RYRRRCVWRYKYYHGKPRR 154
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -3
Query: 244 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 74
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,051,110
Number of Sequences: 59808
Number of extensions: 604697
Number of successful extensions: 2150
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2131
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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