Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10b05
(716 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 255 2e-68
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 204 4e-53
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 118 6e-27
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 7e-21
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 9e-20
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 55 7e-08
SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041) 31 0.93
SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 30 2.2
SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06) 30 2.2
SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_18890| Best HMM Match : OCIA (HMM E-Value=6.3) 29 2.8
SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0) 29 3.8
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4) 29 5.0
SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17) 29 5.0
SB_9821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 28 6.6
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08) 28 6.6
SB_13990| Best HMM Match : Ribosomal_L19 (HMM E-Value=4.1e-15) 28 6.6
SB_12715| Best HMM Match : Adeno_E1A (HMM E-Value=1.3) 28 6.6
SB_48670| Best HMM Match : AT_hook (HMM E-Value=3) 28 8.7
SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38) 28 8.7
SB_41989| Best HMM Match : RVT_1 (HMM E-Value=1.2e-33) 28 8.7
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 28 8.7
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 255 bits (625), Expect = 2e-68
Identities = 120/211 (56%), Positives = 152/211 (72%)
Frame = +1
Query: 82 VEFNNELKCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 261
V+ NN L+ P+LGLGTWKSKPG+V AVK AI GYRHIDCAY Y NEKEVG+A+ ++
Sbjct: 4 VKLNNGLEMPVLGLGTWKSKPGQVENAVKFAIKEGYRHIDCAYAYRNEKEVGDALR-ELL 62
Query: 262 EGVVTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFP 441
VV R+DLFITSKLWNT H P VR ++L +L + YLDLYLIHWP ++++ FP
Sbjct: 63 GSVVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLSFRDGDEFFP 122
Query: 442 TDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVE 621
D+ G + ++ D DTWKAME LV EGLVK+IG+SNFNSKQ++ + A +KPV NQVE
Sbjct: 123 KDEQGNVLYAYHDPCDTWKAMEKLVDEGLVKAIGLSNFNSKQVDDICAIARIKPVANQVE 182
Query: 622 CHPYLNQKRLKEFCEARGVKITAYSPLGSPD 714
CHP LNQ +L + + ++ AYSPLGS D
Sbjct: 183 CHPLLNQAKLIDHHKKHNIQTIAYSPLGSLD 213
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 204 bits (499), Expect = 4e-53
Identities = 98/183 (53%), Positives = 130/183 (71%)
Frame = +1
Query: 127 TWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKL 306
TW+S EV AV+ AI++GYRHIDCA +YGNE E+GEA++ + EG V RE+LF+TSKL
Sbjct: 59 TWQSSKEEVGNAVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKL 118
Query: 307 WNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYV 486
W H PD V A Q TL NL + YLDLYLIH P A+K+ L + G I ++
Sbjct: 119 WCDSHHPDDVLPACQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQ 178
Query: 487 DTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEFCE 666
+TW+AME LV +GL K+IGVSNF+ K+L +LL+ A++ P NQVE HPYL Q++LKEFC+
Sbjct: 179 NTWQAMEGLVAKGLCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKLKEFCD 238
Query: 667 ARG 675
++G
Sbjct: 239 SKG 241
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +1
Query: 121 LGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRED 285
L TW S G+V AV+ A ++GYR IDCA ++GNE GEA++ + +G V RE+
Sbjct: 4 LCTWHSYKGKVGNAVRLAAELGYRLIDCAEIHGNE---GEALSGVLTKGKVKREE 55
Score = 37.1 bits (82), Expect = 0.014
Identities = 12/22 (54%), Positives = 20/22 (90%)
Frame = +1
Query: 646 RLKEFCEARGVKITAYSPLGSP 711
+ K+FC+++G+ +TAYSPLG+P
Sbjct: 280 KCKDFCDSKGILLTAYSPLGNP 301
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 118 bits (283), Expect = 6e-27
Identities = 77/204 (37%), Positives = 108/204 (52%)
Frame = +1
Query: 91 NNELKCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGV 270
N+ K P+LGLG QAV A++ GYR ID A Y NE+ VGEA+
Sbjct: 71 NDGRKIPLLGLGAHDIHS---KQAVLWALESGYRLIDTASRYHNEQSVGEAVRCSN---- 123
Query: 271 VTREDLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQ 450
+ R ++++ +K++ T H A ++L L + Y+DLYLIH+P
Sbjct: 124 IPRCEIYVVTKVYFTEHGYKETMDAFYKSLTRLGLGYVDLYLIHFPVP------------ 171
Query: 451 SGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVECHP 630
SG V +W+AM L GL++SIGVSNFN + LE L Q V P VNQ+E HP
Sbjct: 172 SG--------VVGSWQAMIDLRSRGLIRSIGVSNFNIQHLEALRQQTGVVPAVNQIEVHP 223
Query: 631 YLNQKRLKEFCEARGVKITAYSPL 702
+L K L ++C+ + I A+SPL
Sbjct: 224 FLQMKELTQYCKRHNITIQAFSPL 247
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 97.9 bits (233), Expect = 7e-21
Identities = 66/202 (32%), Positives = 109/202 (53%), Gaps = 2/202 (0%)
Frame = +1
Query: 109 PILGLGTWKSKPGEVT-QAVKDAIDIGYRHIDCAYVYG-NEKEVGEAITSKIKEGVVTRE 282
P++G GT + GE T VK A++ GYR ID A Y +E +V +AI + + R+
Sbjct: 338 PVMGFGT--ATLGEDTLSVVKTALETGYRLIDTAQGYPLSEPQVAKAIA----DSGIPRK 391
Query: 283 DLFITSKLWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 462
D+FI +KL + + +++ +L L+ Y+DL+LIH K T G+
Sbjct: 392 DIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIH----SKTCDDFLLTCAEGEP 447
Query: 463 QFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVECHPYLNQ 642
+ + + ++WKAME L ++G ++S+GVSNFN +L+ L+ ATV Q P+
Sbjct: 448 RGT---WKESWKAMEELHRQGKIRSLGVSNFNVDELQELVNFATVPVSAVQNWFDPFHQD 504
Query: 643 KRLKEFCEARGVKITAYSPLGS 708
++ + FC G++ YS LG+
Sbjct: 505 RKARRFCNKHGIRYIGYSTLGT 526
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 94.3 bits (224), Expect = 9e-20
Identities = 57/177 (32%), Positives = 95/177 (53%)
Frame = +1
Query: 172 AIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPDLVRGALQ 351
A+ GYR +D A +Y NEKEVG A+ K G+ RED+++T+KL + +
Sbjct: 53 ALKNGYRMLDTADIYQNEKEVGSAVR---KSGL-KREDIYVTTKLKPSEEGHSNALKYAK 108
Query: 352 ETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLV 531
E++ L++ Y+DL+LIH P+ G I + + A+ L +EGL+
Sbjct: 109 ESIKKLDIGYVDLFLIHTPRP-------------GNI-------IAAYDALLTLKEEGLI 148
Query: 532 KSIGVSNFNSKQLERLLQHATVKPVVNQVECHPYLNQKRLKEFCEARGVKITAYSPL 702
+S+GVSNF LE L + P +NQ+E +P+ Q+ + ++C G+ + Y+P+
Sbjct: 149 RSVGVSNFGVHHLEELRKAGCRTPAINQIEINPFWRQEEIIKYCNKHGITVEGYAPV 205
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 54.8 bits (126), Expect = 7e-08
Identities = 32/89 (35%), Positives = 47/89 (52%)
Frame = +1
Query: 103 KCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTRE 282
K P GLG + QAV A++ GYR ID A Y NEK VGEA ++E V R
Sbjct: 8 KIPRFGLGLYDLDEKHTKQAVLWALENGYRMIDTAASYNNEKRVGEA----LRESAVPRS 63
Query: 283 DLFITSKLWNTFHRPDLVRGALQETLDNL 369
++++ +K+++T H + A +L L
Sbjct: 64 EVYLVTKVYHTDHGYEKTMKAYDRSLSAL 92
>SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 466 FSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHATVKPVVNQVE---CHPYL 636
+SD Y+D + L EG ++ I ++NF++ +++ + H +K NQ++
Sbjct: 32 YSDKRYLDALLHLSELQSEGKIQEISLTNFDTNRMQEITDHG-IKISSNQIQFSLIDRRA 90
Query: 637 NQKRLKEFCEARGVKITAYSPL 702
N+K +K FC G+ + AY +
Sbjct: 91 NEKMVK-FCLDHGISLLAYGTI 111
>SB_54491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +1
Query: 403 WPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLL 582
W + E SLFP + Y TW++++P + + K I + SK ER+
Sbjct: 69 WSFDWDEGASLFPDFFPRSTTAKTLSYEVTWRSLDPAKEYSMAKDIFRDSILSKDTERIE 128
Query: 583 QHATVKPVV 609
+ K ++
Sbjct: 129 PDSEAKQII 137
>SB_36643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 537
Score = 31.9 bits (69), Expect = 0.53
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +1
Query: 151 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 330
V + + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 260 VPEKITNIIRKSYEEMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 319
Query: 331 LVRGALQETLDNL--NVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 462
R +Q TL ++ + DL L+ Q ++ + D S K+
Sbjct: 320 QKRNGIQWTLWKQLDDLDFADLALLFHTQQQMQEKTNIVADNSAKL 365
>SB_12094| Best HMM Match : Myb_DNA-binding (HMM E-Value=0.00041)
Length = 754
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 401 TGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWR 574
T PR R+T LS R + S+ S T + +++RV E+PTS+ +SW+
Sbjct: 208 TSPRQKRETLLSRRRSTGESSTQEDS---TGDDTSTSATERVRRAVLEAPTSSENSWK 262
>SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1702
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 503 WSRSSKRVWSRASESPTSTRSSWRGCCSTRLSSRSS 610
W +W R+ + T RS W G C T L ++ S
Sbjct: 1014 WDAIHSELWLRSQGTQTKRRSPWTGICRTFLQAKFS 1049
>SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1378
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 436 RESRLPCRPGASVSGTD--PSTERSDCPGSPAGHRAPSPGDETCSTVS 299
R+ P R G+ T+ PS RSD S G S GDE ST+S
Sbjct: 151 RKHSTPARTGSQRESTERVPSVSRSDTSSSLTGSSPASLGDELESTLS 198
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 349 QETLDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGL 528
+++L+ L + +DLYL+HW G++ +T A LV EG+
Sbjct: 49 EKSLERLGIDRIDLYLLHW---------------EGRVPLE-----ETVDAFRELVDEGM 88
Query: 529 VKSIGVSNFN-SKQLERLLQHATV 597
+ GVSN + LE +HA++
Sbjct: 89 IARWGVSNLDLGDPLESTCRHASL 112
>SB_47813| Best HMM Match : HEAT (HMM E-Value=5.9e-06)
Length = 623
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +1
Query: 364 NLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIG 543
NL + +L LI + KE + +G++ D WKAMEP V+ + + I
Sbjct: 376 NLPLDHLQQKLIQETEKLKEIAPHLTQEAAGQVPVVAGRPKDVWKAMEPEVRATVQEHIA 435
Query: 544 VSNFNSKQLE 573
S LE
Sbjct: 436 RDEGESPSLE 445
>SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 401 TGPRPTRKTALSSRPTNQVKSSSR--TSITWTPGRLWSRSSKRVWSRASESPTSTR 562
T +++++ + RPT++ + SR T WTPGR + +R + +PT R
Sbjct: 127 TAEDTSKESSKAKRPTSRPRPPSRLLTKRAWTPGRRTPFACRRAPTPGRRTPTPGR 182
>SB_18890| Best HMM Match : OCIA (HMM E-Value=6.3)
Length = 310
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +1
Query: 94 NELKCPILGLGTWKSKPGEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEG-V 270
N + L LG + G + AV+ ++ G+ G+ KE + + + +
Sbjct: 61 NPISVTTLQLGLERLDMGLMNMAVRSLLEAGF---------GSRKEKAQVEETTTDQACI 111
Query: 271 VTREDLFITSK-LWNTFHRPDLVRGALQETLDNLNVQY 381
++ ED+F+ + + FHR +V+ + T D +++QY
Sbjct: 112 ISAEDMFLPRQSISQRFHRLYVVKKLPEGTTDGVSIQY 149
>SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 761
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 133 KSKP-GEVTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIK 261
KS P G + V A + YRH +Y++G++ EV T +K
Sbjct: 6 KSHPIGTIAVGVAIAAAVYYRHSIKSYIFGDDNEVSALATCVVK 49
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -2
Query: 403 SVSGTDPSTERSDCPGSPAGHRAPSP 326
S S T PS RSD P +P G AP P
Sbjct: 594 SSSHTAPSRGRSDSPPTPEGRGAPPP 619
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/67 (34%), Positives = 33/67 (49%)
Frame = +2
Query: 410 RPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSWRGCCST 589
R +T+LSSR ++ + SR G+ SRS +S S S + +R RG +
Sbjct: 637 RSRSRTSLSSRSRSRDRGGSRR------GKRRSRSRSSSYSSRSRSRSRSRDRGRGRKRS 690
Query: 590 RLSSRSS 610
R SRSS
Sbjct: 691 RRRSRSS 697
>SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
Length = 639
Score = 28.7 bits (61), Expect = 5.0
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 259 KEGVVTREDLFITSK-LWNTFHRPDLVRGALQETLDNLNVQYLDLYLIHWPQAYKEDGSL 435
K+ V +DLF+ L N RPDL + E V DL+L+ PQA + S
Sbjct: 35 KKTQVDSKDLFLLQMPLANESWRPDLSKIKFPEIPKKTPVDAKDLFLLRMPQA---NESW 91
Query: 436 FPTDQSGKIQFSDVD 480
P D S KI+F+ V+
Sbjct: 92 MP-DLS-KIKFAQVE 104
>SB_13905| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-17)
Length = 321
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 124 GTWKSKPGEVTQAVKDAIDIGYRHIDCA 207
G+W + P +VT ++ +D+G RH+ CA
Sbjct: 209 GSWCASPSDVTPFLQ--VDLGTRHVICA 234
>SB_9821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/73 (20%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 175 IDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLW----NTFHRPDLVRG 342
I++ Y+H +C+ + + S +++G + LF+ + W T +P ++
Sbjct: 104 IELFYQHFECSVILDGHLSEWFPVNSGVRQGCIISPLLFLLAIDWIMRNTTADKPRGIQW 163
Query: 343 ALQETLDNLNVQY 381
L L++L+ Y
Sbjct: 164 TLTSQLEDLDFAY 176
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 398 YTGPRPTRKTALSSRPTNQVKSSSRTSITWTPGRLWSRSSKRVWSRASESPTSTRSSW 571
Y + +R+ SSR T++ +S R+ P R WSRS S +S S + T W
Sbjct: 323 YRALQRSRQHKPSSRNTSRSRSPVRSRSPIHP-RSWSRSVSHSLSHSSASRSPTPEDW 379
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -2
Query: 451 IGRSGRESRLPCRPGASVSGTDPSTERSDCPGSPAGHRAPS--PGDETCSTVS 299
+G S + + G SVSG P+++ PG P+ PS P E S+ +
Sbjct: 1330 LGFSASGNSWSTQDGMSVSGLTPNSQPWAAPGGPSSSSTPSSDPSAEAASSTA 1382
>SB_55326| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1289
Score = 28.3 bits (60), Expect = 6.6
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +1
Query: 412 AYKEDGSLFPTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGVSNFNSKQLERLLQHA 591
AY + G F Q K + SD+ V T ++P+ E L ++GVS KQ HA
Sbjct: 1146 AYSKHG--FTRSQLPKARESDIPLVVTLTVVQPVDTEALGMTLGVS---LKQKLSATDHA 1200
Query: 592 TVKPVVNQVECHPY-LNQKRLKEFC 663
+ V N E Y N R + C
Sbjct: 1201 LLFRVSNHAEYVVYRQNVVRSRVLC 1225
>SB_26363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1054
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +1
Query: 151 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 330
V++ + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 726 VSEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 785
Query: 331 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 462
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 786 QKRNGIQWTLWKQLDDLDFAD-DLALLSHTQQQMQEKTNIVADNSARL 832
>SB_18722| Best HMM Match : RVT_1 (HMM E-Value=2.8e-08)
Length = 421
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +1
Query: 151 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 330
V++ + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 82 VSEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 141
Query: 331 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 462
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 142 QKRNGIQWTLWKQLDDLDFAD-DLALLSHTQQQMQEKTNIVADNSARL 188
>SB_13990| Best HMM Match : Ribosomal_L19 (HMM E-Value=4.1e-15)
Length = 267
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 595 VKPVVNQVECHPYLNQKRLKEFCEARGVKIT 687
+K + Q +CH L Q ++ EFC V +T
Sbjct: 115 IKTFLEQRDCHDRLQQLKVPEFCVGSTVAVT 145
>SB_12715| Best HMM Match : Adeno_E1A (HMM E-Value=1.3)
Length = 909
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 164 TACVTSPGFDFQVPNPNIGHFNSLLNSTKG 75
T+C+T FD ++ HF+ +NSTKG
Sbjct: 396 TSCITGNSFDSLDSLDSVTHFSIEVNSTKG 425
>SB_48670| Best HMM Match : AT_hook (HMM E-Value=3)
Length = 207
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 439 PTDQSGKIQFSDVDYVDTWKAMEPLVKEGLVKSIGV 546
P + K + SD+ +V T ++P+ E LV ++GV
Sbjct: 142 PNTKEAKARESDIHFVVTLTVVQPVDTEALVMALGV 177
>SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38)
Length = 492
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +1
Query: 151 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 330
V + + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 154 VPEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 213
Query: 331 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 462
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 214 QKRNGIQWTLWKQLDDLDFAN-DLALLSHTQQQMQEKTNIVADNSARL 260
>SB_41989| Best HMM Match : RVT_1 (HMM E-Value=1.2e-33)
Length = 585
Score = 27.9 bits (59), Expect = 8.7
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +1
Query: 151 VTQAVKDAIDIGYRHIDCAYVYGNEKEVGEAITSKIKEGVVTREDLFITSKLWNTFHRPD 330
V + + + I Y + C V+G + I + +++G + LF+ + W D
Sbjct: 222 VPEKITNIIRKSYEGMTCRVVHGRQLTDAFEIRTGVRQGCLLSPFLFLLAIDWIMKTSTD 281
Query: 331 LVRGALQET----LDNLNVQYLDLYLIHWPQAYKEDGSLFPTDQSGKI 462
R +Q T LD+L+ DL L+ Q ++ + D S ++
Sbjct: 282 QKRNGIQWTLWKQLDDLDFAN-DLALLSHTQQQMQEKTNIVADNSARL 328
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 380 TWICT*YTGPRPTRKTALSSRP 445
T C YTGP+PT T SRP
Sbjct: 2219 TPFCRPYTGPKPTGPTPTPSRP 2240
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,644,501
Number of Sequences: 59808
Number of extensions: 500538
Number of successful extensions: 1832
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1825
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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