Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10a13
(758 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 32 0.44
SB_19116| Best HMM Match : SRR (HMM E-Value=6.9) 32 0.58
SB_57635| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_17183| Best HMM Match : DUF348 (HMM E-Value=5.3) 31 0.77
SB_44282| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 30 1.8
SB_37097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_20022| Best HMM Match : Glyco_transf_10 (HMM E-Value=1.1e-20) 30 2.3
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_41748| Best HMM Match : Transposase_14 (HMM E-Value=0.79) 30 2.3
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 3.1
SB_17796| Best HMM Match : CBM_21 (HMM E-Value=2.1e-23) 29 3.1
SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6) 29 4.1
SB_23474| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12) 29 4.1
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_18710| Best HMM Match : Glycophorin_A (HMM E-Value=0.42) 29 5.4
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 28 7.2
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 28 7.2
SB_54348| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_53077| Best HMM Match : SRP54_N (HMM E-Value=1.8) 28 9.5
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 28 9.5
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 28 9.5
SB_45874| Best HMM Match : TIR (HMM E-Value=0.43) 28 9.5
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_19239| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 32.3 bits (70), Expect = 0.44
Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 10/156 (6%)
Frame = +1
Query: 280 LPYKYYLKKQEHEKRRENFNSNIFEKYKNLSIDLKKRCYVH----SPSNEIRTVTDFDKD 447
L KY +E EK ++++ + + + D +R V SP + D DKD
Sbjct: 268 LQRKYEESLREQEKMKQDYEEIVLLREREKK-DTSERFDVFIDESSPGDRFAAEVDIDKD 326
Query: 448 YFTNIKHERI-CKYTHHYKSLKYMLNDQSRLKQDI-SFRKDSIFNIEVNHRNEVKTY-EL 618
Y H + +Y H + LK + + ++K+ S K+ + + N +K +
Sbjct: 327 YEIQQTHRELRTEYNHVFNQLKSLELENGQMKEQFDSLIKER--DALITECNALKQQCDN 384
Query: 619 ALKKYKDVVKNFDTFIAKDYQ---KSMAYLSQCDEI 717
L+ + + DT + Q + A L CD+I
Sbjct: 385 GLRNIERAARERDTAVKSSQQALKERDAALRDCDQI 420
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 529 SRLKQDISFRKDSIFNIEVNHRNEVKTYELALKKYKDVVKNFDTFIAKDYQKSMAYLSQC 708
S L Q +S+ K+ + E H N Y+ L+ Y+D + I K QK + Y +C
Sbjct: 31 SSLTQQVSYLKNKL---EDEHTN----YKRKLQAYQDGQQRQAQLIQKLQQKVLQYKRKC 83
Query: 709 DEIARKVNEK 738
E+ +NEK
Sbjct: 84 GELESSMNEK 93
>SB_19116| Best HMM Match : SRR (HMM E-Value=6.9)
Length = 108
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +1
Query: 295 YLKKQEHEKRRENFNSNIFEKYKNLSIDLKKRCYVHSPSNEIRTVTDFDKDYFT 456
+L K+E E+RR + +F+ K +LK RCY H + +R + D ++ +FT
Sbjct: 15 FLTKRESEERRMPWF--VFKDMKTAYTELKDRCYRHMEA--LRELQDRNESFFT 64
>SB_57635| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 577 IEVNHRNEVKTYELALKKYKDVVKNFDTFIAKDYQKSMAYLSQCDEIAR 723
IE ++ + YE ALKKYK K + T++ D AY D + R
Sbjct: 157 IENKNKYFLDVYERALKKYKSENKYYSTYLKVDNMLISAYYPAKDSLRR 205
>SB_17183| Best HMM Match : DUF348 (HMM E-Value=5.3)
Length = 334
Score = 31.5 bits (68), Expect = 0.77
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = +1
Query: 277 LLPYKYYLKKQEHEKRRENFNSNIF-----EKYKNLSIDLKKRCYVHSPSNEIRTVTDF- 438
LLP +YLKK + + + + S F YK + + R Y+HSP+ + + F
Sbjct: 212 LLPISHYLKKHQGDDKSPHKQSKRFPLVRISSYKKVCLLPNLRSYMHSPTRKKKQQATFF 271
Query: 439 -DKDYF 453
+KD F
Sbjct: 272 TEKDVF 277
>SB_44282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 277 LLPYKYYLKKQEHEKRRENFNSNIFEKYKNLSIDLKKRC---YVHSPSNEIRTVT 432
++ + +YL +KR+ NFN+ I +Y N + + +RC ++ PSN T++
Sbjct: 172 IMSFYHYLWFTCEDKRKNNFNTGIHLEYNNPTNEFLERCSFNFLPMPSNASPTMS 226
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 586 NHRNEVKTYELALKKYKDVVKNFDTFIAKDYQKSMAYLSQCDEIARKVNEKVPEL 750
N + + + YE+A KKYK ++ D F D S + DE +KV + ++
Sbjct: 308 NEQFKQQKYEVAKKKYKKALRYLDEFQNSDSSDSDDEKEEEDETNKKVEDNAKKM 362
>SB_37097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/108 (22%), Positives = 46/108 (42%)
Frame = +1
Query: 184 VSLKHSNSMSRKCALPEIQPLSAAHLKRTDILLPYKYYLKKQEHEKRRENFNSNIFEKYK 363
+ LK S+ SR+C LP + P + +K + Q K ++ + +
Sbjct: 481 IPLKDSDVGSRECKLPVLDPFLPSVMKHVQL------EAHAQCSGKLYTSYENGALRLHA 534
Query: 364 NLSIDLKKRCYVHSPSNEIRTVTDFDKDYFTNIKHERICKYTHHYKSL 507
N + ++ + Y IR T F+ D+++++ + I HH SL
Sbjct: 535 NTNDNVTQVSY-----QTIRRPTSFNADFYSDLVDQGILNQQHHNVSL 577
>SB_20022| Best HMM Match : Glyco_transf_10 (HMM E-Value=1.1e-20)
Length = 392
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +1
Query: 163 KNMQKKYVSLKHSN--SMSRK---CALPEIQPLSAAHLKRTDILLPYKYYLKKQEHEKRR 327
K +K+V +H N MS AL + ++ ++ + + I +PY YY+ K E K
Sbjct: 124 KPKDQKWVWYEHENPVKMSNNYDVAALDNMIDITISYKRNSTIFVPYGYYVTKDEINKED 183
Query: 328 ENF 336
N+
Sbjct: 184 TNY 186
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/138 (20%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Frame = +1
Query: 343 NIFEKYKNLSIDLKKRCY-VHSPSNEIRTVTDFDKDYFTNIKHERICKYTHHYKSLKYML 519
N+ + KNL +K+ + + S + + +++ ++ HER C+ + +
Sbjct: 1339 NLEFEVKNLKDQMKQLEHALESEKSSNAALIKTYEEHESSWNHER-CELKEQLANKTVAV 1397
Query: 520 NDQS-RLKQDISFRKDSIFNIEVNHRNEVKTYELALKKYKDVVKNFDTFIAKDYQKSMAY 696
+S L+Q++ +D + + R++ A K ++ + NF + + A
Sbjct: 1398 ESKSSELEQELGQLRDELRQQQELLRDKESALAAASSKIEEKIANFSERETELESQVRAL 1457
Query: 697 LSQCDEIARKVNEKVPEL 750
SQC+E+ +V EK L
Sbjct: 1458 ESQCEELEYRVKEKEESL 1475
>SB_41748| Best HMM Match : Transposase_14 (HMM E-Value=0.79)
Length = 270
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +1
Query: 421 RTVTDFDKDYFTNIKHERICK-YTHHYKSLKYMLND-QSRL-KQDISFRKDSIFNIEVNH 591
RT+ +FD D F I+ + + + + HH+ K M D Q+R + D ++ N+
Sbjct: 111 RTIGNFDLDLFEEIRRDCVQRLFKHHHDDNKEMSKDRQTRAPRGDTETGQEEKENLT--- 167
Query: 592 RNEVKTYELALKKYKDVVKNFDTFIAKDYQK 684
E++ Y + ++ V+ D I KD Q+
Sbjct: 168 PEELRPYLIDSGDLEEAVRLNDDMIMKDMQE 198
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +1
Query: 529 SRLKQDISFRKDSIFNIEVNHRNEVKTYELALKKYKDVVKNFDTFIAKDYQKSMAYLSQC 708
SRL+ D+S + + N N + V YE+ +++ VK DT + L +C
Sbjct: 229 SRLEDDVSRYRRNANNATKNEKQVVTKYEV---QFQSTVKQRDT-LRDQVDDLRKELQRC 284
Query: 709 DEIARKVNEKVPE 747
EI K+ +V E
Sbjct: 285 REIISKLQNEVRE 297
>SB_17796| Best HMM Match : CBM_21 (HMM E-Value=2.1e-23)
Length = 212
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 367 LSIDLKKRCYVHSPSNEIRTVTDFDKDYFTNIKHERICKYTHHYKSLKYMLNDQSRLKQD 546
+++ +K + ++E + D DY ++ +R KYT M N++ RL+
Sbjct: 107 VNLAFEKMIIIRYTTDEWKGFRDIWADYVSSTPDKRTDKYTFRISLCASMFNEKKRLQFA 166
Query: 547 ISFR 558
I FR
Sbjct: 167 ICFR 170
>SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6)
Length = 256
Score = 29.1 bits (62), Expect = 4.1
Identities = 32/144 (22%), Positives = 59/144 (40%)
Frame = +1
Query: 139 ERSLKREKKNMQKKYVSLKHSNSMSRKCALPEIQPLSAAHLKRTDILLPYKYYLKKQEHE 318
E +LK+ ++ M + K K + L HLK + + ++QE E
Sbjct: 60 EEALKKAEEEMMLQ--EHKQRGLERSKQEAQRLLALQEQHLKEEQEI-KNEVEKERQEEE 116
Query: 319 KRRENFNSNIFEKYKNLSIDLKKRCYVHSPSNEIRTVTDFDKDYFTNIKHERICKYTHHY 498
KRR E K ++ K++ S T D + F + +R+ + +
Sbjct: 117 KRRMEIEKQRMESEKKRILESKQKRIEESKD------TIHDNEKFLEEQRKRLVEKVKNE 170
Query: 499 KSLKYMLNDQSRLKQDISFRKDSI 570
+ ML+DQ R K++ +RK+ +
Sbjct: 171 GEEERMLHDQ-RQKEEEQWRKEGV 193
>SB_23474| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12)
Length = 623
Score = 29.1 bits (62), Expect = 4.1
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Frame = +1
Query: 118 KIFVKLFERSLKREKKNMQKKYVSLKHSNSMSRKCALPEIQPLS-AAHLKRTDILLPYKY 294
+I K RS KR++ +K + K + + P +S AH+ + L PY+
Sbjct: 166 RIIAKFIRRS-KRDEVYSNRKNLKQKRTKDLPTVRDQPAESGVSRTAHIFINESLTPYRK 224
Query: 295 YLKKQEHEKRRENFNSNIFEKYKNL------SIDLKKRCYVHSPSNEIRTVTDFDK 444
L + + RR+ NSN+ NL S + + SPS+E ++ +K
Sbjct: 225 KLFSRISKYRRDIANSNMHNDIFNLLTNPDKSDESDSDLMLSSPSSEYFSINKLNK 280
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.1 bits (62), Expect = 4.1
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 11/160 (6%)
Frame = +1
Query: 289 KYYLKKQEHEKRRENFNSNIFEKYK-------NLSIDLKKRCYVHSPSNEIRTVTDFDKD 447
KY L+K+E EKR +++ + EK K NL K+ + + + T D +
Sbjct: 1607 KYQLEKEEAEKRLQSYEDELNEKQKQKEKAEDNLKALKKRISDLEVDNKNLETARD-NAV 1665
Query: 448 YFTNIKHERICKYTHHYKSLKYMLNDQSRLKQDISFRKDSIFNIEVNHRNEVK----TYE 615
Y +I +++ + + LK ++ +L + ++ + +E N ++K YE
Sbjct: 1666 YERDIANQKFVEQRTDNEVLK---EEKEKLLMQLKDLQNEVARLE-NQLEDLKKRNADYE 1721
Query: 616 LALKKYKDVVKNFDTFIAKDYQKSMAYLSQCDEIARKVNE 735
L K + + ++ Q+ Q ++ RK+NE
Sbjct: 1722 KLLAKSGNKDDLLENLRKRNKQRENELQKQIADLQRKLNE 1761
>SB_18710| Best HMM Match : Glycophorin_A (HMM E-Value=0.42)
Length = 1451
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +1
Query: 400 HSPSNEIRTVTDFDKDYFTNIKHERICKYTHHYKSLKYMLNDQSRLKQDISFRKDSIFNI 579
+ P ++ T +K +N+ H+ + + + +Y+ L+ ++ S K+D S RKD +
Sbjct: 1290 NDPGRALKQNTGEEKKT-SNVHHKHV-QPSANYEELRGDNSEFSEQKRDSSTRKDQASDT 1347
Query: 580 EVNHRNEVKTY---ELALKKY 633
R EVK Y + +LKK+
Sbjct: 1348 YEELRTEVKDYAPLDRSLKKH 1368
>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 758
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/46 (28%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Frame = +1
Query: 82 QHSVRIEIPKSRKIFVKLFE-----RSLKREKKNMQKKYVSLKHSN 204
+H+ R K ++I+ ++ E + + +EK+N++KKY++ +H N
Sbjct: 612 EHTGRTPKGKRKEIWREIRELETILKDVHKEKRNIEKKYLAFQHEN 657
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/116 (19%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = +1
Query: 409 SNEIRTVTDFDKDYFTN-IKH--ERICKYTHHYKSLKYMLNDQSRLKQDISFRKDSIFNI 579
SN + + K F+N +++ E++ ++ + Y +LK DQ L Q+++ +DS+ +
Sbjct: 1111 SNSVTEALEDQKQEFSNELRNAMEKVEEWENAYVALK---KDQDSLLQELAAAQDSLAAV 1167
Query: 580 EVNHRNEVKTYELALKKYKDVVKNFDTFIAKDYQKSMAYLSQCDEIARKVNEKVPE 747
E + + +E ++ K V F+ ++ + Q D + ++ + E
Sbjct: 1168 EGDFAENERRFENEMQASKMRVSKFEAQAHSIVKQRDSLREQLDSVKDELRKSKEE 1223
>SB_54348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 154 REKKNMQKKYVSLKHSNSMSRKCALPEIQPLSAAHLKRTDI 276
R+ N ++ VS HS + R+C LP + H+ + +
Sbjct: 79 RQANNSNQRIVSYSHSPGILRRCRLPFSRGNGTVHMSKQPV 119
>SB_53077| Best HMM Match : SRP54_N (HMM E-Value=1.8)
Length = 533
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 595 NEVKTYELALKKYKDVVKNFDTFIAKDYQKSMAYLSQCDEIARKVNEKVPEL 750
N+ TYE+ L KD++K + K KS+ + D + K+ + + +L
Sbjct: 410 NKKLTYEICLPPEKDILKRTKRIVKKIKAKSVFVATDNDPMLEKLTKALKKL 461
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 27.9 bits (59), Expect = 9.5
Identities = 25/109 (22%), Positives = 47/109 (43%)
Frame = +1
Query: 64 VMSTKSQHSVRIEIPKSRKIFVKLFERSLKREKKNMQKKYVSLKHSNSMSRKCALPEIQP 243
+M + +++ I + R K E + + KK+M KK K + R+C++
Sbjct: 178 IMREQMSRKIKLRIVQKRSEDDKRQESNHNKRKKSM-KKIREEKMKDQWKRRCSI----- 231
Query: 244 LSAAHLKRTDILLPYKYYLKKQEHEKRRENFNSNIFEKYKNLSIDLKKR 390
S AHL+R + + ++Q E+R + ++ L LK R
Sbjct: 232 -SLAHLERKQMKEMQRLERRRQNIERRTSTVQEHSEKQQAVLEQCLKTR 279
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Frame = +1
Query: 427 VTDFDKDYFTNIKHERICKYTHHYKSLKYMLNDQSRLKQDISFRKDSI--FNIEVNHRN- 597
+ D KD N E+I + +L+ ++++ +++D++ K I +N E+ R+
Sbjct: 1431 IRDLTKD--RNSLDEKIEELRRQVNTLR---DEKNIVERDLNELKSKIDYYNQEIESRDK 1485
Query: 598 ---EVKTYELALKKYKDVVKNFDTFIAKDYQKSMAYLSQCDEIARKVNEKV 741
++K L++ D +K + DY+ ++ + ++ R VNEK+
Sbjct: 1486 TIEDLKLKRDELERQMDALKKDMRRVEADYETAIQKIENMEKANRSVNEKI 1536
>SB_45874| Best HMM Match : TIR (HMM E-Value=0.43)
Length = 876
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +1
Query: 613 ELALKKYKDVVKNFDTFIAKDYQKSMAYLSQCDEIARKVNEKVPE 747
EL +D +K K+++KS Y+S+C++I R + + +
Sbjct: 446 ELGTPVIRDELKETLLRYKKNHRKSYVYISECEKIIRSLRSSLAD 490
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 595 NEVKTYELALKKYKDVVKNFDTFIAKDYQKSMAYLSQCDEIARKVNE 735
NE K YE + + K VK +T + QK DE+ RK+ E
Sbjct: 1002 NETKRYESSSSQLKQQVKELETDNLQRKQKLSLTEKDRDELERKIAE 1048
>SB_19239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +1
Query: 10 IICYFIFYINKLHDSN*IVMSTKSQHSVRIEIPKSRKIFVKLFERSLKREKKNMQKKYVS 189
+IC + + LH +V K ++ + P++ +R RE KN+
Sbjct: 3 VICRYQMDVEMLHTP--VVDKYKENQAINVSTPRNTCGLSGKIKRGGARENKNLNITLAV 60
Query: 190 LKHSNSMSRKCA 225
+ H N+++++ A
Sbjct: 61 VLHQNNVAKRTA 72
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 25.0 bits (52), Expect(2) = 9.5
Identities = 20/105 (19%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +1
Query: 457 NIKHERICKYTHHYKSLKYMLNDQSRLKQD----ISFRKDSIFNIEVNHRNEVKTYELAL 624
N+KHE + H +++L+ + + L+ + +S + N ++ R + + L
Sbjct: 479 NLKHEHAAELDHLHETLESVQMENGELQTEFDLVVSDLNSELENNKLKARVDRRRGSGIL 538
Query: 625 KKYKDVVKNFDTFIAKDYQKSM-AYLSQCDEIARKVNEKVPELXN 756
K+ D +K+ + + Q + Y S+ +++ +++ K E N
Sbjct: 539 KEQIDKLKDTNVEYVHNLQDEIERYKSKINDLEKELELKTSEKQN 583
Score = 21.0 bits (42), Expect(2) = 9.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 307 QEHEKRRENFNSNIFEKYKNL 369
+EH+ EN FE+ +NL
Sbjct: 460 EEHQYLMENLKKEHFEEVENL 480
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,952,416
Number of Sequences: 59808
Number of extensions: 362682
Number of successful extensions: 1220
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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