Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0010
(304 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25352| Best HMM Match : W2 (HMM E-Value=9.1e-20) 101 1e-22
SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29) 38 0.001
SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027) 30 0.31
SB_21277| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.95
SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05) 27 2.9
SB_9286| Best HMM Match : DUF240 (HMM E-Value=1) 27 2.9
SB_13659| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00051) 27 3.9
SB_44454| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.1
SB_15488| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00019) 26 5.1
SB_21071| Best HMM Match : efhand (HMM E-Value=0.48) 26 6.7
SB_58593| Best HMM Match : W2 (HMM E-Value=0.0069) 25 8.9
SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_22196| Best HMM Match : FtsJ (HMM E-Value=3.6e-25) 25 8.9
SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_20719| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
>SB_25352| Best HMM Match : W2 (HMM E-Value=9.1e-20)
Length = 457
Score = 101 bits (242), Expect = 1e-22
Identities = 41/71 (57%), Positives = 58/71 (81%)
Frame = +1
Query: 10 RAELALLTKVQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWYKDTSSSKGKVMFLD 189
++E LL KVQEYCY+NM+FM+ F K+V++ YKT +LSE+ I+ WYK +S+KGK MFL+
Sbjct: 259 KSEKNLLIKVQEYCYDNMNFMKVFQKIVLLFYKTDILSEDSIIAWYKGENSTKGKSMFLE 318
Query: 190 QMKKFVDWLQN 222
QMKK ++WLQ+
Sbjct: 319 QMKKMIEWLQS 329
>SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29)
Length = 770
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +1
Query: 16 ELALLTKVQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWYKDTSS---SKGKVMFL 186
++ L +Q +C+ N ++ ++LY V+ EE +KW +D + KGK +F
Sbjct: 690 QVCALYALQVFCHTNNHPKGLLLRMFMLLYDLEVVDEEAFVKWKEDVNEKYPGKGKALF- 748
Query: 187 DQMKKFVDWLQ 219
Q+ ++ WL+
Sbjct: 749 -QVNTWLTWLE 758
>SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027)
Length = 406
Score = 30.3 bits (65), Expect = 0.31
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 148 CTT*GSPPPRGRSSCTALPPAY*TR 74
C + GS PP + SCTA P+Y TR
Sbjct: 373 CNSLGSTPPTQQPSCTAQGPSYETR 397
>SB_21277| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 28.7 bits (61), Expect = 0.95
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 145 YKDTSSSKGKVMFLDQMKKFVDWLQN 222
YKD + K K+ ++ K+FV++L+N
Sbjct: 364 YKDCNGQKSKIQSIEFQKQFVNYLEN 389
>SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 19 LALLTKVQEYCYENMSFMRAFSKLVVMLY-KTSVLSEEVI 135
L+ + K++ CY N + RAF L+V+ Y K +++S ++
Sbjct: 951 LSKIAKLRPGCYINKNVSRAFCTLLVLCYTKITMISFSIL 990
>SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05)
Length = 770
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 150 FVPLEDHLLREDARLVQHYHQLTERAHEAHVLVAVLLDLSEQGE 19
F P + +LLR ++ V+ ++Q + E H L+ D +GE
Sbjct: 240 FFPFDPYLLRRSSKYVKPHYQEWKGVGEEHALLEDHQDDESEGE 283
>SB_9286| Best HMM Match : DUF240 (HMM E-Value=1)
Length = 292
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 167 LEELVSLYHLRITSSERTLVLYSITTSL 84
+E L +L H+++ + + VLY +TTSL
Sbjct: 255 IESLDALVHVQVNEIKNSPVLYKLTTSL 282
>SB_13659| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00051)
Length = 1024
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = -3
Query: 200 FFIWSRNMTLPLEELVSLYHLRITSSERTLVLY 102
FF+W R PLE++ S++ +++ + ++
Sbjct: 952 FFLWHRTRNKPLEDITSMFSTHSDWNDQVVCMF 984
>SB_44454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 26.2 bits (55), Expect = 5.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 200 FFIWSRNMTLPLEELVSLY 144
FF+W R PLE++ S++
Sbjct: 657 FFLWHRTRNKPLEDITSMF 675
>SB_15488| Best HMM Match : Peptidase_C5 (HMM E-Value=0.00019)
Length = 589
Score = 26.2 bits (55), Expect = 5.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 200 FFIWSRNMTLPLEELVSLY 144
FF+W R PLE++ S++
Sbjct: 511 FFLWHRTRNKPLEDITSMF 529
>SB_21071| Best HMM Match : efhand (HMM E-Value=0.48)
Length = 151
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +1
Query: 28 LTKVQEYCYENMSFMRAFS------KLVVMLYKTSVLSEEVILKWYKDTSSSKGKVMFLD 189
L KV + E F++ +S + V++ + + + E++ W K + KG++++ D
Sbjct: 64 LPKVPDGRVEYREFLKTYSTRDDVIRNVLVQHHVILNNNELLSLWRKHDVNGKGRIVYKD 123
Query: 190 QMKKFV 207
++ FV
Sbjct: 124 FLRHFV 129
>SB_58593| Best HMM Match : W2 (HMM E-Value=0.0069)
Length = 160
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 37 VQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWY 147
+Q++ +N + +LY+ VL E VIL W+
Sbjct: 41 IQDFFLDNAWCRDTLQVCLHLLYEMDVLDETVILHWH 77
>SB_45181| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +1
Query: 37 VQEYCYENMSFMRAFSKLVVMLYKTSVLSEEVILKWY 147
+Q++ +N + +LY+ VL E VIL W+
Sbjct: 680 IQDFFLDNAWCRDTLQVCLHLLYEMDVLDEAVILHWH 716
>SB_22196| Best HMM Match : FtsJ (HMM E-Value=3.6e-25)
Length = 941
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -2
Query: 138 EDHLLREDARLVQHYHQLTERAHEAHVLVAVLLDLSEQGELCPRA 4
E + D +V+ +HQ T R H+A ++V L + + + E+C +A
Sbjct: 77 ESKSMLNDIDIVE-WHQHTRRTHKAGLVVKTLRE-TMRAEMCTQA 119
>SB_31640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3003
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = -2
Query: 198 LHLVKEHDLALGRTSVFVPLEDHLLREDARLVQHYHQLTERAHEAHVLVAVLLDLSEQGE 19
LH+ +E+ L + +E +L+ + V+ + LTE HE L+ L ++E G+
Sbjct: 2527 LHM-QEYSLDVTEVLDESSVEGNLVLDFMTQVKGFRALTENVHEILSLIEELSSINEDGQ 2585
>SB_20719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 25.4 bits (53), Expect = 8.9
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 200 FFIWSRNMTLPLEELVSLY 144
FF+W R PLE++ S++
Sbjct: 168 FFLWHRTRYKPLEDITSMF 186
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,822,874
Number of Sequences: 59808
Number of extensions: 137731
Number of successful extensions: 380
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 380
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 364677581
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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