Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0009
(578 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 150 7e-37
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 148 3e-36
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 148 4e-36
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 1e-28
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 122 2e-28
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 3e-28
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 121 4e-28
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 120 6e-28
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 3e-27
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 118 5e-27
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 102 2e-22
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 99 2e-21
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 95 5e-20
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 93 1e-19
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 1e-18
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 9e-17
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 64 8e-11
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 63 1e-10
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 59 3e-09
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 55 4e-08
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 51 6e-07
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 45 4e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 40 0.001
SB_21771| Best HMM Match : TP2 (HMM E-Value=0.34) 28 6.3
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_17039| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 150 bits (364), Expect = 7e-37
Identities = 68/181 (37%), Positives = 111/181 (61%), Gaps = 1/181 (0%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPR 218
E+++LQ GQCGNQIG +FW+ + EHGI P G + +R +V++ +A Y+PR
Sbjct: 3 EIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPR 62
Query: 219 AVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFDII 395
+VL+DLEP + ++ + P+ +++ P+N + GAGNNWA G Y +G +L + V D++
Sbjct: 63 SVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELMDSVLDVV 120
Query: 396 NREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLSDRFS*ETCSDIQCLPQT*MK*SDV 575
+EA+ D ++GF L HS+ GGTGSGMG+ ++ + + + + +P K SD
Sbjct: 121 RKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSP--KVSDT 178
Query: 576 V 578
V
Sbjct: 179 V 179
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 148 bits (359), Expect = 3e-36
Identities = 69/181 (38%), Positives = 109/181 (60%), Gaps = 1/181 (0%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPR 218
E++ Q GQCGNQIG +FW+ + EHGI P G + +R +V++ +A Y+PR
Sbjct: 216 EIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPR 275
Query: 219 AVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFDII 395
AVL+DLEP + ++ + P+ +++ P+N + GAGNNWA G Y +G +L + V D++
Sbjct: 276 AVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 333
Query: 396 NREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLSDRFS*ETCSDIQCLPQT*MK*SDV 575
+EA+ D L+GF L HS+ GGTGSGMG+ ++ + + + + +P K SD
Sbjct: 334 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP--KVSDT 391
Query: 576 V 578
V
Sbjct: 392 V 392
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 148 bits (358), Expect = 4e-36
Identities = 68/181 (37%), Positives = 109/181 (60%), Gaps = 1/181 (0%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPR 218
E++ Q GQCGNQIG +FW+ + EHGI P G + +R +V++ +A Y+PR
Sbjct: 3 EIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPR 62
Query: 219 AVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFDII 395
A+L+DLEP + ++ + P+ +++ P+N + GAGNNWA G Y +G +L + V D++
Sbjct: 63 AILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 396 NREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLSDRFS*ETCSDIQCLPQT*MK*SDV 575
+EA+ D L+GF L HS+ GGTGSGMG+ ++ + + + + +P K SD
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP--KVSDT 178
Query: 576 V 578
V
Sbjct: 179 V 179
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 123 bits (296), Expect = 1e-28
Identities = 60/158 (37%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E I++ +GQ G Q+G W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 3 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGKHV 62
Query: 213 PRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFD 389
PRAV DLEP V+ + Y +L++PE + K A NN+A G Y G+++ + V D
Sbjct: 63 PRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTVGKEMIDTVLD 120
Query: 390 IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
+ + ADG L+GF++ HS GGTGSG S ++E LS
Sbjct: 121 RLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 158
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 122 bits (294), Expect = 2e-28
Identities = 62/158 (39%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E I++ +GQ G QIG W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 588 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 647
Query: 213 PRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFD 389
PRAV +DLEP V+ + Y +L++PE + K A NN+A G Y G++L + V D
Sbjct: 648 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTVGKELIDLVLD 705
Query: 390 IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
I + AD L+GF++ HS GGTGSG S ++E LS
Sbjct: 706 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 743
Score = 120 bits (290), Expect = 6e-28
Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E I++ +GQ G QIG W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 67 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 126
Query: 213 PRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFD 389
PRAV +DLEP V+ + Y +L++PE + K A NN+A G Y G+++ + V D
Sbjct: 127 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLD 184
Query: 390 IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
I + AD L+GF++ HS GGTGSG S ++E LS
Sbjct: 185 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 222
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Frame = +3
Query: 24 IKMPSEMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQAD 197
++ E I++ +GQ G QIG W+ C+EHGI P+G + ++ G D + FF +
Sbjct: 510 VEYQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 569
Query: 198 DDHYIPRAVLLDLEPRV 248
++PRAV +DLEP V
Sbjct: 570 AGKHVPRAVFVDLEPTV 586
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 122 bits (293), Expect = 3e-28
Identities = 62/158 (39%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E I++ +GQ G QIG W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 374 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKHV 433
Query: 213 PRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFD 389
PRAV +DLEP VI + Y +L++PE + K A NN+A G Y G++ + V D
Sbjct: 434 PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTVGKEQIDIVLD 491
Query: 390 IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
+ + ADG L+GF++ HS GGTGSG S ++E LS
Sbjct: 492 RLRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLS 529
Score = 118 bits (284), Expect = 3e-27
Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E I++ +GQ G Q+G W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 807 ECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 866
Query: 213 PRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFD 389
PRAV DLEP V+ + Y +L++PE + K A NN+A G Y G+++ + V D
Sbjct: 867 PRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTVGKEMIDLVLD 924
Query: 390 IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
I + AD L+GF++ HS GGTGSG S ++E LS
Sbjct: 925 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLS 962
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 121 bits (292), Expect = 4e-28
Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E I++ +GQ G QIG W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 213 PRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFD 389
PRAV +DLEP V+ + Y +L++PE + K A NN+A G Y G+++ + V D
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKED--AANNYARGHYTVGKEIVDLVLD 120
Query: 390 IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
I + AD L+GF++ HS GGTGSG S ++E LS
Sbjct: 121 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 158
Score = 121 bits (292), Expect = 4e-28
Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E I++ +GQ G QIG W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 436 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 495
Query: 213 PRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFD 389
PRAV +DLEP V+ + Y +L++PE + K A NN+A G Y G+++ + V D
Sbjct: 496 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTVGKEIVDLVLD 553
Query: 390 IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
I + AD L+GF++ HS GGTGSG S ++E LS
Sbjct: 554 RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 591
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 120 bits (290), Expect = 6e-28
Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 3/158 (1%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E I++ +GQ G QIG W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 2 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 61
Query: 213 PRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFD 389
PRAV +DLEP V+ + Y +L++PE + K A NN+A G Y G+++ + V D
Sbjct: 62 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTVGKEIIDLVLD 119
Query: 390 IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
I + AD L+GF++ HS GGTGSG S ++E LS
Sbjct: 120 RIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLS 157
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 118 bits (285), Expect = 3e-27
Identities = 61/158 (38%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E +++ +GQ G Q+G W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 421 ECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 480
Query: 213 PRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFD 389
PRAV +DLEP VI I Y +L++PE + K A NN+A G Y G+ + V D
Sbjct: 481 PRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKED--AANNYARGHYTVGKDHIDNVLD 538
Query: 390 IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
I + AD L+GF++ HS GGTGSG + +LE LS
Sbjct: 539 RIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLS 576
Score = 108 bits (259), Expect = 4e-24
Identities = 55/145 (37%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +3
Query: 78 IGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYIPRAVLLDLEPRVI 251
+G W+ C+EHGI P+G + ++ G D + FF + ++PRAV DLEP V+
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 252 HTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFDIINREADGSDNLE 428
+ Y +L++PE + K A NN+A G Y G++L E V D + + AD L+
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQ 118
Query: 429 GFVLCHSIAGGTGSGMGSYILEHLS 503
GF++ HS GGTGSG S ++E LS
Sbjct: 119 GFLIFHSFGGGTGSGFSSLLMERLS 143
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 118 bits (283), Expect = 5e-27
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E I++ +GQ G Q+G W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 3 ECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHV 62
Query: 213 PRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFD 389
PRAV +DLEP V+ + Y +L++PE + K A NN+A G Y G+++ + V D
Sbjct: 63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIIDLVLD 120
Query: 390 IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
+ AD L+GF++ HS GGTGSG S ++E LS
Sbjct: 121 RCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLS 158
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 102 bits (245), Expect = 2e-22
Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E I++ +GQ G QIG W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGKHV 62
Query: 213 PRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFD 389
PRAV +DLEP V+ +PE + K A NN+A G Y G++ ++V D
Sbjct: 63 PRAVFVDLEPTVV----------ALSPEQLITGKED--AANNYARGHYTIGKQQVDQVLD 110
Query: 390 IINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
+ + AD L+GF + HS GGTGSG S ++E LS
Sbjct: 111 RLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLS 148
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/125 (36%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Frame = +3
Query: 207 YIPRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEV 383
Y+PRAVL+DLEP + ++ + P+ +++ P+N + GAGNNWA G Y +G +L + V
Sbjct: 4 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSV 61
Query: 384 FDIINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLSDRFS*ETCSDIQCLPQT*MK 563
D++ +EA+ D ++GF L HS+ GGTGSGM + ++ + + + + +P K
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSP--K 119
Query: 564 *SDVV 578
SD V
Sbjct: 120 VSDTV 124
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 94.7 bits (225), Expect = 5e-20
Identities = 58/165 (35%), Positives = 95/165 (57%), Gaps = 10/165 (6%)
Frame = +3
Query: 42 MITLQLGQCGNQIGFEFWKQLCIEHG--ISPEGILEEFASAGSDRKDV-----FFYQADD 200
++TLQLGQCGNQIG E + L +E ++ + +E + + FF + +D
Sbjct: 3 IVTLQLGQCGNQIGRELF-DLIVEDATKLNSRFLCKELTTRSCTEYEEESLARFFTREND 61
Query: 201 DHYIPRAVLLDLEPRVI-HTIMNSPYAKLYN-PENVYLSKHGGGAGNNWASGYAQ-GEKL 371
D RAV +D+E +VI T+ + + + P+ S+ G +GNNWA G+++ G K
Sbjct: 62 DILNARAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRG-SGNNWAHGFSEHGPKS 120
Query: 372 NEEVFDIINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLSD 506
++V D++ RE + D L+GF+ S+AGGTGSG+G+++ L D
Sbjct: 121 IDKVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRD 165
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Frame = +3
Query: 207 YIPRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEV 383
Y+PR++L+DLEP + + P ++ P+N S+ GA NNWA G Y++G +L + +
Sbjct: 15 YVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQ--SGAANNWAKGHYSEGAELIDNI 72
Query: 384 FDIINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLSDRFS*ETCSDIQCLP 548
FD++ +EA+ D ++G L ++ GGTGSG+G+ IL + + + S +P
Sbjct: 73 FDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVP 127
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 90.2 bits (214), Expect = 1e-18
Identities = 47/100 (47%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Frame = +3
Query: 207 YIPRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEV 383
Y+PRAVL+DLEP VI + Y LY+PE + K A NN+A G Y G+++ E V
Sbjct: 972 YVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKED--AANNYARGHYTIGKEMVEVV 1029
Query: 384 FDIINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
D I + D L+GF++ HS GGTGSG S I EHLS
Sbjct: 1030 MDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLS 1069
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 86.6 bits (205), Expect = 1e-17
Identities = 46/116 (39%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +3
Query: 159 GSDRKDVFFYQADDDHYIPRAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNN 338
G D + FF + ++PRAV +DLEP VI I Y +L++PE + K A NN
Sbjct: 10 GDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKED--AANN 67
Query: 339 WASG-YAQGEKLNEEVFDIINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
+A G Y G++ + D I + AD L+GF++ HS GGTGSG S ++E LS
Sbjct: 68 YARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 123
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 83.8 bits (198), Expect = 9e-17
Identities = 33/87 (37%), Positives = 56/87 (64%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFFYQADDDHYIPR 218
E++ Q GQCGNQIG +FW+ + EHGI P G + +R +V++ +A Y+PR
Sbjct: 3 EIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYVPR 62
Query: 219 AVLLDLEPRVIHTIMNSPYAKLYNPEN 299
A+L+DLEP + ++ + P+ +++ P+N
Sbjct: 63 AILVDLEPGTMDSVRSGPFGQIFRPDN 89
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 64.1 bits (149), Expect = 8e-11
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = +3
Query: 39 EMITLQLGQCGNQIGFEFWKQLCIEHGISPEGIL--EEFASAGSDRKDVFFYQADDDHYI 212
E I++ +GQ G QIG W+ C+EHGI P+G + ++ G D + FF + ++
Sbjct: 3 ECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGKHV 62
Query: 213 PRAVLLDLEPRVI 251
PRAV +DLEP V+
Sbjct: 63 PRAVFVDLEPSVV 75
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 64.1 bits (149), Expect = 8e-11
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +3
Query: 327 AGNNWASG-YAQGEKLNEEVFDIINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
A NNWA G Y +G +L + D I + A+ D ++GF + HS+ GGTGSG+GS +L +
Sbjct: 5 AANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLSKIR 64
Query: 504 DRFS*ETCSDIQCLP 548
+ + S LP
Sbjct: 65 EEYPDRLVSSFCVLP 79
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 63.3 bits (147), Expect = 1e-10
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 IMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFDIINREADGSDNLEGF 434
+ Y +L++PE + K A NN+A G Y G++L + V D I + AD L+GF
Sbjct: 15 VRTGTYRQLFHPEQLITGKED--AANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 435 VLCHSIAGGTGSGMGSYILEHLS 503
++ HS GGTGSG S ++E LS
Sbjct: 73 LIFHSFGGGTGSGFSSLLMERLS 95
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 63.3 bits (147), Expect = 1e-10
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 IMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFDIINREADGSDNLEGF 434
+ Y +L++PE + K A NN+A G Y G++L + V D I + AD L+GF
Sbjct: 3 VRTGTYRQLFHPEQLITGKED--AANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
Query: 435 VLCHSIAGGTGSGMGSYILEHLS 503
++ HS GGTGSG S ++E LS
Sbjct: 61 LIFHSFGGGTGSGFSSLLMERLS 83
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 258 IMNSPYAKLYNPENVYLSKHGGGAGNNWASG-YAQGEKLNEEVFDIINREADGSDNLEGF 434
I Y +L++PE + K A NN+A G Y G++ + D I + AD L+GF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKED--AANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
Query: 435 VLCHSIAGGTGSGMGSYILEHLS 503
++ HS GGTGSG S ++E LS
Sbjct: 61 LIFHSFGGGTGSGFSSLLMERLS 83
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 55.2 bits (127), Expect = 4e-08
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Frame = +3
Query: 216 RAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASGY------AQGEKLNE 377
R V +D E +VI + S N ++ ++ G GNN+A GY G L
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQNRDSNIIAGRRG-RGNNFALGYHGNSIDEGGTSLLH 98
Query: 378 EVFDIINREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLSDRF 512
D + +E + D+ G ++ HS+ GGTGSG+G+ ++E LSD +
Sbjct: 99 MTMDAMRKEVERCDSFAGTIVMHSLTGGTGSGLGARLVETLSDAY 143
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 45 ITLQLGQCGNQIGFE 89
I L +GQCGNQIG E
Sbjct: 4 ILLPVGQCGNQIGHE 18
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +3
Query: 393 INREADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLSDRFS*ETCSDIQCLP 548
+ +EA+ D ++GF L HS+ GGTGSG+G+ IL HL + + S + P
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFP 52
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +3
Query: 216 RAVLLDLEPRVIHTIMNSPYAKLYNPENVYLSKHGGGAGNNWASGYAQGEKLNEEVFDII 395
RAVL+D+E V++ I+ P +++ + + G GNNW + + + +++F ++
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDV--SGCGNNWYTLLCKCFAIRKDIFVVV 133
Query: 396 NREADGSDNLEGFVL-CHSIAGGTGSGMGSYILEHLSDRF 512
+ + E + GTGSG+G+Y+L L D +
Sbjct: 134 QSFKEWTLCFEAKEMYLEDQNKGTGSGVGTYVLNLLHDDY 173
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +3
Query: 24 IKMPSEMITLQLGQCGNQIGFEFWKQLCIEHGISPEGILEEFASAGSDRKDVFF 185
I+ E +++ +GQ G QIG W+ C+EHGI P+G + SA DR D F
Sbjct: 193 IQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSA--DRCDDSF 244
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 399 READGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
+ AD L+GF++ HS GGTGSG S ++E LS
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLS 289
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 108 IEHGISPEGILEEFASAGSDRKDVFFYQADD 200
I I +GILE+FA+ G+DRKDVFFYQ D
Sbjct: 139 IRENIRQDGILEDFATDGTDRKDVFFYQDVD 169
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 405 ADGSDNLEGFVLCHSIAGGTGSGMGSYILEHLS 503
AD L+GF++ HS GGTGSG S ++E LS
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLS 33
>SB_21771| Best HMM Match : TP2 (HMM E-Value=0.34)
Length = 1691
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 330 GNNWASGYAQGEKLNEEVFDIINREADGSDNLEGFVLCHSIAGGTGSGMG 479
G A + G+ LN + DG D EG V H+ +GG G+ +G
Sbjct: 1323 GREVAQEVSAGQGLNYAAVAAATAD-DGDDAQEGVVDAHAASGGEGTRLG 1371
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 90 FWKQLCIEHGISPEGILEEFAS-AGSDRKDVFF 185
FW+ + EHGI P+G S +DR +V+F
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYF 33
>SB_17039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 33 PSEMITLQLGQCGNQIG-FEFWKQLCIEHGISPEGILEEFASAG 161
P +++ CG+ ++W Q+ EH + P +L AS G
Sbjct: 4 PDPDLSVAWAPCGHYFADSDYWLQVTFEHAVVPAAVLVYLASDG 47
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,269,279
Number of Sequences: 59808
Number of extensions: 385352
Number of successful extensions: 930
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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