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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120071.Seq
         (801 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)                 100   1e-21
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)              89   3e-18
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)                  67   2e-11
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)              60   3e-09
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)               59   4e-09
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)              58   1e-08
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)              58   1e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0)                         57   2e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)                  56   3e-08
SB_37351| Best HMM Match : DEAD (HMM E-Value=0)                        54   1e-07
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)                  52   5e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)              50   2e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0)                        49   5e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)            48   7e-06
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)              47   2e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   1e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0)                         44   2e-04
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)               43   3e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)                42   4e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   8e-04
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)                   40   0.002
SB_17563| Best HMM Match : DEAD (HMM E-Value=0)                        38   0.007
SB_2247| Best HMM Match : DEAD (HMM E-Value=0)                         38   0.007
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)              37   0.017
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)                  36   0.038
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)                  36   0.051
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)                   33   0.27 
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)                 31   0.82 
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.4  
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)                         30   2.5  
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.3  
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)            29   4.4  
SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)                  29   4.4  
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)               29   4.4  
SB_32980| Best HMM Match : DEAD (HMM E-Value=0)                        29   5.8  

>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
          Length = 690

 Score =  100 bits (240), Expect = 1e-21
 Identities = 45/72 (62%), Positives = 57/72 (79%)
 Frame = +3

Query: 549 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 728
           +ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA   G    +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172

Query: 729 REQARDLEKGVE 764
             Q R+LE+GVE
Sbjct: 173 GPQIRELERGVE 184



 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = +2

Query: 311 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 478
           R  +EV+ YR + ++TV+G  V  P+  FEE+ FPDY+Q   K  G+ EPT IQAQ
Sbjct: 57  RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112


>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 790

 Score = 89.4 bits (212), Expect = 3e-18
 Identities = 42/81 (51%), Positives = 55/81 (67%)
 Frame = +3

Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
           +TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI   A  FG    +  
Sbjct: 562 KTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHV 621

Query: 702 TCVFGGAPKREQARDLEKGVE 764
             VFGG  K EQ++ L++G E
Sbjct: 622 VAVFGGGNKYEQSKALQEGAE 642



 Score = 74.9 bits (176), Expect = 7e-14
 Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 7/193 (3%)
 Frame = +2

Query: 239  PRLGFFSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 418
            P       +PFNKNFY+ HP + K+S  E+++ R    + VSG     P   F    F +
Sbjct: 467  PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526

Query: 419  YVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LAYSNGFRQNVGLHLASHCAHKQPTAYSE 598
             +   ++ + Y +PT IQ Q  PIA+SG++ +  +          L     H       +
Sbjct: 527  QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586

Query: 599  R*WSDCFGLGAYQRVSTTNSASCCRFWTHI-----LCS*H-VCVWWCS*K-RASPGLGEG 757
                   G G    +       C + +T         + H V V+    K   S  L EG
Sbjct: 587  ------VGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEG 640

Query: 758  SRIVIATPGRLID 796
            + IV+ATPGRLID
Sbjct: 641  AEIVVATPGRLID 653


>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
          Length = 428

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
 Frame = +3

Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 689
           +TGSGKT A+ +P +V I   P I R +    GP AL+LAPTRELAQQI++    FG   
Sbjct: 146 ETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPL 205

Query: 690 YVRNTCVFGGAPK 728
            +R   V GGA +
Sbjct: 206 GIRTVSVIGGADR 218



 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 20/58 (34%), Positives = 35/58 (60%)
 Frame = +2

Query: 335 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
           +R +  ++  G  +  PI+ ++EA  PD + + V  +GYK+PTPIQ Q  PI +  ++
Sbjct: 83  FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRD 140


>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 797

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 33/79 (41%), Positives = 44/79 (55%)
 Frame = +3

Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
           QTGSGKT AY+LP +  +  Q        P+AL +APTRELA+QI   A  F   + ++ 
Sbjct: 524 QTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKV 583

Query: 702 TCVFGGAPKREQARDLEKG 758
              +GG     QA  LE+G
Sbjct: 584 CVCYGGVSVPYQASQLERG 602



 Score = 38.7 bits (86), Expect = 0.005
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 359 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
           VSG      I  F E  F + +   +   GY+ PTP+Q    PI M+G++ +A
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521


>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 592

 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = +2

Query: 263 QPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 439
           QPF K+FY   P + K +P E +E+R + E + V G     P++ + +      +   +K
Sbjct: 62  QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121

Query: 440 TMGYKEPTPIQAQGWPIAMSGKN*LA 517
              Y++PTPIQAQ  P+ MSG++ +A
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIA 147



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 28/76 (36%), Positives = 39/76 (51%)
 Frame = +3

Query: 537 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 716
           K  +Y  P  +     P I  G   IA+V+ PTRELA QI +    F   + +R  CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180

Query: 717 GAPKREQARDLEKGVE 764
           G    EQ  +L++G E
Sbjct: 181 GTGISEQIAELKRGAE 196


>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 478

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
 Frame = +3

Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSY 692
           + Q+G+GKT  + +  +  I+     + G D   ALVLAPTRELAQQIQ+V    G   +
Sbjct: 128 QAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMH 187

Query: 693 VRNTCVFGGAPKREQARDLEKGV 761
           V+     GG   RE    LE+GV
Sbjct: 188 VKCHACIGGTNVREDRMKLEEGV 210



 Score = 29.9 bits (64), Expect = 2.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 677 WTHILCS*HVCVWWCS*KRASPGLGEGSRIVIATPGRLID 796
           + H+ C  H C+   + +     L EG  +V+ TPGR+ D
Sbjct: 185 YMHVKC--HACIGGTNVREDRMKLEEGVHVVVGTPGRVFD 222


>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1170

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
 Frame = +3

Query: 522  QTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 689
            QTGSGKT A++LP +  + N             P A+ +APTRELA QI   A  F H +
Sbjct: 756  QTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGT 815

Query: 690  YVRNTCVFGGAPKREQARDLEKG 758
             +R    +GG     Q R L+ G
Sbjct: 816  MLRPVVCYGGVSVSHQLRQLQSG 838



 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 5/155 (3%)
 Frame = +2

Query: 350  EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LAYS-N 526
            EV VSG      I  FEEAN  +     V+   YK+PTP+Q    PI ++G++ +A +  
Sbjct: 698  EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757

Query: 527  GFRQNVGLHL----ASHCAHKQPTAYSER*WSDCFGLGAYQRVSTTNSASCCRFWTHILC 694
            G  +     L    +   A    +++SE        +   + ++        +F    + 
Sbjct: 758  GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTML 817

Query: 695  S*HVCVWWCS*KRASPGLGEGSRIVIATPGRLIDF 799
               VC    S       L  G  +++ TPGRL DF
Sbjct: 818  RPVVCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDF 852


>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
          Length = 1238

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = +3

Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 656
           +TGSGKTLAY LP  + +  + P   GD P+AL+L PTREL QQ+
Sbjct: 117 ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 23/80 (28%), Positives = 40/80 (50%)
 Frame = +2

Query: 269 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 448
           F  ++YD +  V + S   V+E R  + + + G +   PI+ F + N P  +   +    
Sbjct: 32  FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91

Query: 449 YKEPTPIQAQGWPIAMSGKN 508
           ++ PTPIQ Q     MSG++
Sbjct: 92  FQVPTPIQMQSLSCVMSGRD 111



 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 746 LGEGSRIVIATPGRLID 796
           L EG+ +V+ATPGRL+D
Sbjct: 214 LREGADVVVATPGRLLD 230


>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
          Length = 500

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 24/75 (32%), Positives = 42/75 (56%)
 Frame = +2

Query: 284 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 463
           Y  HPT+   +  +V++ R+  E+ V G  V +P+  F   +F + + + +   GY  PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220

Query: 464 PIQAQGWPIAMSGKN 508
           PIQ Q  P+ +SG++
Sbjct: 221 PIQMQVLPVLLSGRD 235


>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 688

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +3

Query: 501 ERISWRTQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADF 677
           E +  + +TG+GKTL++ LP +  + + +   +RG  P  LV+APTRELA+Q+     + 
Sbjct: 111 EDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL 170

Query: 678 GHTSYVRNTCVFGGAPKREQARDLEKGVE 764
              S +   C++GG P   Q   +  G++
Sbjct: 171 --KSNLEVYCIYGGMPYEPQENAINSGLD 197


>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
          Length = 978

 Score = 52.0 bits (119), Expect = 5e-07
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
 Frame = +3

Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHT 686
           QTGSGKTLAY+ P +VH   +   R G       P A ++ P RELA QI + A    H 
Sbjct: 423 QTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHH 481

Query: 687 SYVRNTCVFGGAPKREQARDLEKGVE 764
           +  R+  + GG  ++    DLE  V+
Sbjct: 482 ARFRSVGLIGGRKQKWMRDDLESPVD 507


>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1448

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 27/80 (33%), Positives = 46/80 (57%)
 Frame = +3

Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
           +TGSGKTLA+++P +V +  +   +  +G   ++++PTREL+ Q   VA D         
Sbjct: 617 KTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTY 675

Query: 702 TCVFGGAPKREQARDLEKGV 761
             + GG  ++ +A  L+KGV
Sbjct: 676 GIIMGGVNRKAEAERLQKGV 695


>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 340

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = +3

Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
           +TGSGKTLA+++P I  +  Q      DG  ALV++PTRELA Q  +V    G+   +  
Sbjct: 95  KTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSA 153

Query: 702 TCVFGGAP-KREQARDLEKGV 761
             + GG   K EQ R ++  +
Sbjct: 154 GLIIGGKDLKNEQKRIMKTNI 174



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 386 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 508
           ++ F +         G+   G+  PT IQ QG P+A+SG++
Sbjct: 49  VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRD 89


>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
          Length = 1058

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = +2

Query: 323 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 490
           ++  +R+   + V G +V +P++ F    E   FPDY+   V+  GY  PTPIQ Q  P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196

Query: 491 AMSG 502
              G
Sbjct: 197 MAHG 200


>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 370

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 31/81 (38%), Positives = 43/81 (53%)
 Frame = +3

Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 695
           + Q+G+GKT  + +  +  I+ Q  +R    P ALVL+PTRELA QIQ+V    G    V
Sbjct: 40  QAQSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGDYMSV 94

Query: 696 RNTCVFGGAPKREQARDLEKG 758
           +     GG    E  R L+ G
Sbjct: 95  QCHACIGGTNIGEDIRKLDYG 115


>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1039

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 23/66 (34%), Positives = 38/66 (57%)
 Frame = +3

Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
           +TGSGKT A+++P    +          G  AL+L+PTRELA Q Q+   + G  + +++
Sbjct: 326 RTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELGRFTGLKS 382

Query: 702 TCVFGG 719
           + + GG
Sbjct: 383 SVILGG 388


>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 436

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 28/76 (36%), Positives = 38/76 (50%)
 Frame = +3

Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
           +TGSGKT A+ LP +  + + P      G  A+VL PTRELA QI       G    ++ 
Sbjct: 52  KTGSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKE 106

Query: 702 TCVFGGAPKREQARDL 749
             + GG    +QA  L
Sbjct: 107 AVIVGGLDMMKQALSL 122


>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
          Length = 238

 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 29/78 (37%), Positives = 38/78 (48%)
 Frame = +3

Query: 522 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 701
           +TGSGKT A+ LP +  + + P         AL+L PTRELA QI +     G    V+ 
Sbjct: 9   ETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALGSGIGVKC 63

Query: 702 TCVFGGAPKREQARDLEK 755
             + GG     QA  L K
Sbjct: 64  AVIVGGIDMMSQALMLAK 81


>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
          Length = 185

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 22/56 (39%), Positives = 31/56 (55%)
 Frame = +2

Query: 350 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
           EV VSG      I  FEEAN  +     V+   YK+PTP+Q    PI ++G++ +A
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMA 176


>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 697

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
 Frame = +3

Query: 522 QTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQIQ 659
           +TGSGKTLA+ +P I HI         Q P         +G   +AL++APTRELA Q++
Sbjct: 176 ETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235

Query: 660 QVAADFGHTSYVRNTCVFGGAPKREQARDLEKGVE 764
                    + V+   + GG    +Q R L++  E
Sbjct: 236 DHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPE 270


>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
          Length = 120

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 23/50 (46%), Positives = 27/50 (54%)
 Frame = +3

Query: 609 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLEKG 758
           P ALVL+PTRELA QIQ+V    G    V+     GG    E  R L+ G
Sbjct: 4   PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYG 53


>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = +3

Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 680
           R + G+GKT AY++P +   +      +     ALVL PTRELA Q  Q+  + G
Sbjct: 90  RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +2

Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
           FE+      +  G+   G+ +P+PIQ +  P+A++G++ LA
Sbjct: 49  FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89


>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = +3

Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 680
           R + G+GKT AY++P +   +      +     ALVL PTRELA Q  Q+  + G
Sbjct: 90  RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +2

Query: 395 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
           FE+      +  G+   G+ +P+PIQ +  P+A++G++ LA
Sbjct: 49  FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89


>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
          Length = 490

 Score = 37.1 bits (82), Expect = 0.017
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
 Frame = +3

Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 692
           ++Q+G+GKT A++L  +  ++   P      P  + L+PT ELA+Q  +VA   G H  +
Sbjct: 148 QSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPH 202

Query: 693 VR-NTCVFGGA-PKREQARD 746
           ++ N  V G   P+ ++  D
Sbjct: 203 IKINYAVRGNQFPRGQKCTD 222



 Score = 29.1 bits (62), Expect = 4.4
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +2

Query: 347 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 499
           HEV V   +  +P+   + FEE      +++GV  MG+ +P+ IQ    P+ ++
Sbjct: 86  HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139


>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
          Length = 456

 Score = 35.9 bits (79), Expect = 0.038
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = +3

Query: 528 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 695
           GSGK LAY+LP I  I      +     +GP+ L+L    +   ++  V  D   +    
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293

Query: 696 RNTCVFGGAPKREQARDLEKGVE 764
           R   +FGG  + ++   L  G E
Sbjct: 294 RVQMIFGGGAEEDRIVPLINGCE 316


>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
          Length = 559

 Score = 35.5 bits (78), Expect = 0.051
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = +3

Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSY 692
           +++TG+GK+L ++LP++     Q P  RG G I  ++ PTRELA Q + +V+   G  S 
Sbjct: 203 KSETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSI 254

Query: 693 V 695
           V
Sbjct: 255 V 255


>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
          Length = 96

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +3

Query: 525 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 653
           TG+GKT A++LP +  +  +P   +      LV+ PTRELA Q
Sbjct: 56  TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 428 QGVKTMGYKEPTPIQAQGWPIAMSGKN 508
           + V  +G+  PTPIQA   P+A+ GK+
Sbjct: 23  RAVNELGFLHPTPIQASTIPVALMGKD 49


>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
          Length = 1199

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +3

Query: 225 QNMRRPDWDSFHSNLSTKTFMIHILQFSKD 314
           +N RR  WDSFHSN+S  +   H+  F  D
Sbjct: 768 RNKRR--WDSFHSNVSADSGSAHMFDFDTD 795


>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1375

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 386  IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN*LA 517
            I  FE+ +  + +   V   GYK+PTP+Q    PI    ++ +A
Sbjct: 874  ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917


>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 480

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +2

Query: 371 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 484
           ++H P++   +  FP Y +       Y  P P QA  W
Sbjct: 6   DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43


>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
          Length = 675

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +2

Query: 281 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 421
           + D    VL     E EE  NN  H++ +  + +HNP  YFE+ +  DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264


>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 45

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 683 HILCS*HVCVWWCS*KRASPGLGEGSRIVIATPGRLID 796
           H+ C  H C+   + +     L EG  +V+ TPGR+ D
Sbjct: 2   HVKC--HACIGGTNVREDRMKLEEGVHVVVGTPGRVFD 37


>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
          Length = 694

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 777 VAMTILLPSPSPGLALF*EHHQTHTCYEH 691
           +  T ++  PSP + ++  HHQ H  + H
Sbjct: 191 ITSTTIITMPSPSIVIYRRHHQHHQHHHH 219


>SB_50950| Best HMM Match : AAA_5 (HMM E-Value=0.0006)
          Length = 1552

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = +3

Query: 423 CNKV*RQWVTKNRRLFKLKAGR*LCLERISWRTQTGSGK 539
           CN+  R  V K+RRL    AGR   L  I   T +GS K
Sbjct: 59  CNESGRMSVDKDRRLISTSAGRVTKLPPIGAPTSSGSNK 97


>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
          Length = 1093

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 21/79 (26%), Positives = 38/79 (48%)
 Frame = +3

Query: 507 ISWRTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHT 686
           IS  TQT    +L   +P  +HIN+  P R    PI + + PT+  +  I  ++ D   +
Sbjct: 426 ISVDTQTTKPASLRVNVPLSLHINDSSPTRL-SFPITMDVHPTKTTSVTI-PISEDMQTS 483

Query: 687 SYVRNTCVFGGAPKREQAR 743
           +  + T  F  +  +E ++
Sbjct: 484 TIAKQTSSFPRSNDKEASK 502


>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 985

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +3

Query: 516 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 692
           + ++G+GKT  + + A+ ++     I   +    ++L PTRE+A Q++ V    G H   
Sbjct: 56  QAKSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIGCHYDG 110

Query: 693 VRNTCVFGGAPKREQARDLE 752
           +      GG    E  + L+
Sbjct: 111 LACKVFIGGISLEEDKKALK 130


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,121,837
Number of Sequences: 59808
Number of extensions: 513610
Number of successful extensions: 1356
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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