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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060086.seq
         (572 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)                  75   5e-14
SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18)                   38   0.006
SB_51892| Best HMM Match : WD40 (HMM E-Value=8.7e-14)                  37   0.013
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)                  36   0.018
SB_42943| Best HMM Match : WD40 (HMM E-Value=0)                        36   0.031
SB_45687| Best HMM Match : WD40 (HMM E-Value=4.5e-16)                  36   0.031
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.095
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.095
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)              33   0.13 
SB_6110| Best HMM Match : No HMM Matches (HMM E-Value=.)               33   0.13 
SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21)                  33   0.17 
SB_50270| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.22 
SB_36541| Best HMM Match : WD40 (HMM E-Value=0)                        33   0.22 
SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40)                  32   0.29 
SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.38 
SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42)               32   0.38 
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.38 
SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.51 
SB_6741| Best HMM Match : WD40 (HMM E-Value=0)                         31   0.67 
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)                    31   0.67 
SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42)              31   0.67 
SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)                   30   1.2  
SB_23694| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.2  
SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45)               30   1.5  
SB_56034| Best HMM Match : GATA (HMM E-Value=5.6e-17)                  30   1.5  
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.0  
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.0  
SB_57418| Best HMM Match : WD40 (HMM E-Value=4.5e-15)                  29   2.7  
SB_2216| Best HMM Match : WD40 (HMM E-Value=9.6e-16)                   29   2.7  
SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22)                  29   3.6  
SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22)                   29   3.6  
SB_44417| Best HMM Match : RdRP_2 (HMM E-Value=5.6)                    29   3.6  
SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14)                  29   3.6  
SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17)                    29   3.6  
SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.6  
SB_13850| Best HMM Match : WD40 (HMM E-Value=3.1e-06)                  28   4.7  
SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)                    28   4.7  
SB_11437| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.7  
SB_1950| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.2  
SB_24742| Best HMM Match : E-MAP-115 (HMM E-Value=4.8)                 28   6.2  
SB_18573| Best HMM Match : WD40 (HMM E-Value=1.5e-06)                  28   6.2  
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)                28   6.2  
SB_39225| Best HMM Match : NIF (HMM E-Value=0)                         27   8.2  
SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.2  
SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36)                  27   8.2  
SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.2  
SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16)                  27   8.2  

>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
          Length = 458

 Score = 74.5 bits (175), Expect = 5e-14
 Identities = 29/54 (53%), Positives = 40/54 (74%)
 Frame = +1

Query: 256 KSVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR 417
           ++ ++F L++ RL+ D I+KGH   VDQLCWH S+PDL  T  GDK++RIWD R
Sbjct: 55  RTASVFVLDKDRLTLDHIYKGHNESVDQLCWHPSNPDLFVTASGDKTIRIWDAR 108



 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 25/44 (56%), Positives = 36/44 (81%)
 Frame = +2

Query: 122 IEDLSELRSYFASHNTTREYIAHSSKVHSVGWSCDGRKLASGSF 253
           ++ L+E+R +F  +  T+++ AH+SKVHSV WSCDGR+LASGSF
Sbjct: 10  LDYLNEMRKHFECNTKTKDFTAHNSKVHSVSWSCDGRRLASGSF 53


>SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18)
          Length = 736

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +1

Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHK 426
           GH G V  L W   HPD L T   D S ++WD  +++
Sbjct: 20  GHCGRVTALSWSPHHPDRLVTSSYDGSAQVWDVETNQ 56



 Score = 33.1 bits (72), Expect = 0.17
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 310 FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIW 408
           ++GH G V  +CW    PD++ +   D +VR W
Sbjct: 61  YRGHVGRVMSVCWSYLDPDVVFSGGEDGTVRPW 93


>SB_51892| Best HMM Match : WD40 (HMM E-Value=8.7e-14)
          Length = 353

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 310 FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIW 408
           F GHTG + Q+ W+  +P+   T   D SVR+W
Sbjct: 111 FHGHTGPIYQVKWNPLYPEAFLTCSADWSVRLW 143


>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
          Length = 1093

 Score = 36.3 bits (80), Expect = 0.018
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +1

Query: 313 KGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDT 414
           + HT  V++L W+  + +LL++   D SVR+WDT
Sbjct: 201 QAHTSGVNRLDWNPVYTNLLASCSMDNSVRVWDT 234


>SB_42943| Best HMM Match : WD40 (HMM E-Value=0)
          Length = 273

 Score = 35.5 bits (78), Expect = 0.031
 Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 250 IRKSVAIFN-LERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWD 411
           IR+++ ++  +   +LS     KGH G V Q+  + S+PD + +   DK + +W+
Sbjct: 27  IRRNLGLYRAIMAEQLSLRGTLKGHNGWVTQIATNPSNPDTILSSSRDKKLIVWE 81


>SB_45687| Best HMM Match : WD40 (HMM E-Value=4.5e-16)
          Length = 301

 Score = 35.5 bits (78), Expect = 0.031
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 310 FKGHTGXVDQL--CWHASHPDLLSTXXGDKSVRIWDTRS 420
           F  HT  V  +  C HA HP L ++   DK+VR+WD  +
Sbjct: 135 FTEHTDRVSSVRFCPHALHPGLCASGADDKTVRLWDVET 173


>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1855

 Score = 33.9 bits (74), Expect = 0.095
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 292  LSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCA-ATIPTKGGK 459
            L + FI  GHT  +    W+ + P +L +   D  +++W  + H C     PTK  +
Sbjct: 892  LQRKFIHGGHTAKISDFSWNPNEPWVLCSVSEDNIMQVW--QMHPCGLCNKPTKSNQ 946


>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1480

 Score = 33.9 bits (74), Expect = 0.095
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 310 FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR 417
           F  H G V  L WH    + ++T   DK V++WD +
Sbjct: 417 FMAHNGPVFTLDWHPEDRNWIATGGRDKCVKVWDVQ 452


>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
          Length = 1487

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +1

Query: 262  VAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHK 426
            + +++++  RL +  +  GH   V  L +  SHP L+S    DK+VR+W+    K
Sbjct: 1361 IFVWSIQTGRLLE--VLAGHEAPVSSLAFSPSHPVLIS-GAWDKTVRLWNVFESK 1412


>SB_6110| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2051

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +1

Query: 253  RKSVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSH 423
            R+  + F+L++++L     F GH+G V  LC   S    LS    DK+V++W   +H
Sbjct: 1718 RERKSQFHLQQAKLQT---FTGHSGAVRSLCIQDSEHYFLSASK-DKTVKLWSLSNH 1770


>SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21)
          Length = 123

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 289 RLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWD 411
           +LS     KGH G V Q+  + S+PD + +   DK + +W+
Sbjct: 4   QLSLRGTLKGHNGWVTQIATNPSNPDTILSSSRDKKLIVWE 44


>SB_50270| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 857

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = +1

Query: 247 VIRKSVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHK 426
           ++  +V +F+LE    S      GHTG V  +    +H   ++T   DK V IWD  + K
Sbjct: 148 LMANAVKVFDLETRMFSN---MHGHTGYVLSIIALGNHQ--VATGSMDKQVMIWDAATLK 202

Query: 427 C 429
           C
Sbjct: 203 C 203


>SB_36541| Best HMM Match : WD40 (HMM E-Value=0)
          Length = 1070

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 316 GHTGXVDQLCWHASHPD-LLSTXXGDKSVRIWDTRSHKCAATIPTKGGK 459
           GHT  +D  C   +  D  + T  GD  + IW+T +H C  T+   GGK
Sbjct: 212 GHTQRLD--CVTVTRDDKFIVTSGGDSLINIWNTENHDCIHTLKI-GGK 257



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +1

Query: 259 SVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPD-LLSTXXGDKSVRIWDTRSHKCAA 435
           ++ +++L +    Q  + +GHT  V  LC   +  D  + +   D + R+W+  + KC +
Sbjct: 697 TIRLWDLTKGECKQ--VMQGHTNEV--LCLSVTSNDKTIVSGSNDFTARVWNVATGKCVS 752

Query: 436 TI 441
           T+
Sbjct: 753 TV 754


>SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40)
          Length = 400

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +1

Query: 295 SQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR-SHKCAATIPTKGGK 459
           S   I +GH   V  + W   +  LL+T   D  V +WD R +  C   +    GK
Sbjct: 177 SASHILRGHATAVLSVSWSPLNQYLLATGGRDNKVLLWDVRKAVSCLTALDQHNGK 232



 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/50 (20%), Positives = 25/50 (50%)
 Frame = +1

Query: 319 HTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKGGKHKY 468
           H   ++ + W+     +  T   D+++++WDT + +   T   +G  +K+
Sbjct: 98  HRSSIETVQWYPHDSGMFLTSSVDRTLKVWDTNALQVVETFNFEGIVYKH 147


>SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 475

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +1

Query: 322 TGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR---SHKCAATI 441
           +G    + WH  H  L  +   D  + IWDTR   S+K A T+
Sbjct: 275 SGISKDVSWHLLHESLFGSVADDHKLMIWDTRQTNSNKAAHTV 317



 Score = 29.5 bits (63), Expect = 2.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +1

Query: 304 FIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIW 408
           FI  GHT  +    W+ + P +L +   D  +++W
Sbjct: 416 FIHGGHTAKISDFSWNPNEPWVLCSVSEDNIMQVW 450



 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 319 HTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHK 426
           HT  V+ L ++     +L+T   DK+V +WD R+ K
Sbjct: 320 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK 355


>SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42)
          Length = 383

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 313 KGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
           +GH G V+ + +   +  + S    DKS+RIW   S KC  T+
Sbjct: 185 RGHQGAVNVVAFSLDNRYIFS-GSDDKSIRIWSRESSKCENTL 226


>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 645

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 310 FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIW 408
           F GHTG V  LC H    +LL +   DK+++IW
Sbjct: 456 FVGHTGPVWALCVHG---ELLFSGSSDKTIKIW 485


>SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 539

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +1

Query: 388 DKSVRIWDTRSHKCAATIP 444
           D+SVRIWD ++ KC  T+P
Sbjct: 78  DESVRIWDVKTGKCLKTLP 96


>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
          Length = 714

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +1

Query: 304 FIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKGGKHKY 468
           ++   HT  V   C+ A+   +L++  GDK+ R+WD       A  P  G  H Y
Sbjct: 6   YVISRHTKDVTGCCFSANSR-VLASCSGDKTARLWDVEKGTELAQSPLDG--HNY 57


>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
          Length = 3369

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +1

Query: 304  FIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKC 429
            F   GH   + +L   +++PD++ +   +  VR+WD  + +C
Sbjct: 3200 FTLHGHRDGITELKVDSNNPDIVISGASNGGVRVWDLSTGEC 3241


>SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42)
          Length = 198

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +1

Query: 304 FIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKGGKHKY 468
           ++   HT  V   C+ A+   +L++  GDK+ R+WD       A  P  G  H Y
Sbjct: 6   YVISRHTKDVTGCCFSANSR-VLASCSGDKTARLWDVEKGTELAQSPLDG--HNY 57


>SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)
          Length = 1199

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 295 SQDFI--FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCA 432
           + DFI   KGH+  V  L  H S  DL  +   DK   +W  + HK A
Sbjct: 605 TSDFIPLVKGHSDEVPALAVHPSK-DLFISASMDKFAYLWSAKDHKTA 651


>SB_23694| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 172

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/49 (26%), Positives = 27/49 (55%)
 Frame = +1

Query: 295 SQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
           ++  +++GH+G V  +    +    L+T   DKSV+ W+  + +C  T+
Sbjct: 24  TEALVYEGHSGMVRCVTVDPTG-QWLATGSDDKSVKFWEVATGRCTKTV 71


>SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 998

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +1

Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
           GHT  V+ + W+   P ++++   D +VRIW   + + +  +
Sbjct: 245 GHTRTVNCVTWNPLVPSMMASASDDGTVRIWGPSTEETSGNL 286


>SB_58364| Best HMM Match : WD40 (HMM E-Value=2.8026e-45)
          Length = 426

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +1

Query: 313 KGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKGGKHKYS 471
           K H+G +  L W      +L T  GDKS +IW+    K   T P     + YS
Sbjct: 202 KAHSGGIYGLSWSDDSKFIL-TASGDKSCKIWNIED-KSLQTFPLVARLYCYS 252


>SB_56034| Best HMM Match : GATA (HMM E-Value=5.6e-17)
          Length = 297

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 71  FYMITKAMKDSKHSQAPIEDLSELRSYFASHNTTREYIAHSSKVHSVGWSCDG-RKLASG 247
           FYM   +  DSK   + I +L   +S+F + N T  +   S K   +G S D  R LAS 
Sbjct: 3   FYMKKHSFFDSKRIPSSIAELERYKSFFTNLNET-SHSGISIKKAKIGQSPDSIRSLASC 61

Query: 248 S 250
           S
Sbjct: 62  S 62


>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1308

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 319 HTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRS 420
           H+G V  L ++   P+LL++   D  + IWD  S
Sbjct: 122 HSGAVQALDFNPFQPNLLASGASDSEIFIWDMNS 155


>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 459

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 188 HSSKVHSVGWSCDGRKLASGSFVK 259
           H   V+++ +S DGR LASGSF K
Sbjct: 332 HHEPVYTISFSPDGRYLASGSFDK 355


>SB_57418| Best HMM Match : WD40 (HMM E-Value=4.5e-15)
          Length = 365

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 307 IFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWD 411
           +FK  TG +  + WH +   + +    D  + +WD
Sbjct: 270 LFKHSTGPITSVEWHPTDGSVFAASSADNQITLWD 304


>SB_2216| Best HMM Match : WD40 (HMM E-Value=9.6e-16)
          Length = 400

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +1

Query: 238 GFWVIRKSVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR 417
           G+ ++   V ++ +   RL    +  GH   +  +    S P+ L T   D+ VRI+DTR
Sbjct: 205 GYGILGNKVRLYQVSSCRLLA--LLSGHHYEITCINVRDSPPNRLITGSYDRRVRIFDTR 262

Query: 418 SHKCAATI 441
                 T+
Sbjct: 263 CESPTQTL 270


>SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22)
          Length = 453

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +1

Query: 307 IFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
           I   H   +  + W+  + D+L++   D  V IW  +  K  A++
Sbjct: 56  ILADHRKTITAIAWNPHNEDILASAGADCRVLIWSIKEQKIIASL 100


>SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22)
          Length = 442

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSH 423
           GH G V  L W+     +++T   D  V IW    H
Sbjct: 13  GHKGAVLDLAWNPFDDHMIATGSEDARVMIWQIPEH 48


>SB_44417| Best HMM Match : RdRP_2 (HMM E-Value=5.6)
          Length = 541

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = -3

Query: 234 FLPSQDQPTECTLDECAMYSRVVLCDAK*LRNS--LKSSIGACECFESFIA 88
           FLPS    TEC L  C  Y  V       LR S  L S     EC  +F++
Sbjct: 58  FLPSHTATTECALTFCHRYEEVCSYLLTPLRGSVPLPSHTSTRECVFTFLS 108


>SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14)
          Length = 867

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +2

Query: 188 HSSKVHSVGWSCDGRKLASGSFVKALQ 268
           H+ +V S+ WS DG++LA+ S  K L+
Sbjct: 152 HNEQVFSLAWSADGKQLATFSRDKKLR 178


>SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17)
          Length = 289

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +1

Query: 304 FIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR 417
           F  +GH   V  LC+ A+H   L +   D ++ +WD R
Sbjct: 124 FELQGHISKVQALCF-AAHSKKLISCGEDGAIMVWDMR 160


>SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 945

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +1

Query: 307 IFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
           + +GH G V   C     P +LS    DK++++W+  S  C  T+
Sbjct: 637 VLQGHEGAVS--CLEFDAPFVLS-GSADKTIKLWNVESGDCLNTL 678


>SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 468

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSH 423
           GH G V  L W+     +++T   D  V IW    H
Sbjct: 77  GHKGAVLDLAWNPFDDHMIATGSEDARVMIWQIPEH 112


>SB_13850| Best HMM Match : WD40 (HMM E-Value=3.1e-06)
          Length = 229

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +1

Query: 313 KGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
           KGH    + + +H +  +LL++   D +V++WD  + K   T+
Sbjct: 181 KGHYDKPNIVRYHPNAENLLTSAAYDLTVKLWDINAAKSVITL 223


>SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)
          Length = 515

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTR 417
           GH   V+ + ++   PD+L +   D ++R+W +R
Sbjct: 475 GHQNVVNCVAFNPRDPDMLVSASDDHTLRVWKSR 508


>SB_11437| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 298

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 352 ASHPDLLSTXXGDKSVRIWDTRSHKC 429
           ASHP+L  T   D ++R+W      C
Sbjct: 169 ASHPELGITASADSTIRVWSITKGSC 194


>SB_1950| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 420

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/68 (23%), Positives = 31/68 (45%)
 Frame = +1

Query: 256 KSVAIFNLERSRLSQDFIFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAA 435
           ++V I+N    +L Q    +GHT  ++         + + T  GD  + +W   + +C A
Sbjct: 239 RNVCIWNANSGKLLQTL--RGHTDEIE------FDDEKVVTGGGDNLIMVWSAHTGECTA 290

Query: 436 TIPTKGGK 459
           T+    G+
Sbjct: 291 TLSGHTGE 298


>SB_24742| Best HMM Match : E-MAP-115 (HMM E-Value=4.8)
          Length = 215

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/64 (23%), Positives = 29/64 (45%)
 Frame = +2

Query: 2   GTRNSRQINKKH*QENN*SFNVKFYMITKAMKDSKHSQAPIEDLSELRSYFASHNTTREY 181
           GT+ ++   +K  +  N   + K      A +  +  +AP+ D+ EL+   A+     EY
Sbjct: 85  GTKKNKDTKQKESRTRNAESSRKSDTYRGANESRRDYRAPVADIDELKQSIANVQEQEEY 144

Query: 182 IAHS 193
           +  S
Sbjct: 145 VLSS 148


>SB_18573| Best HMM Match : WD40 (HMM E-Value=1.5e-06)
          Length = 76

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 388 DKSVRIWDTRSHKCAATI 441
           D+S+R+WDT S  C+ T+
Sbjct: 12  DESIRLWDTTSGTCSLTL 29


>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2323

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/64 (23%), Positives = 29/64 (45%)
 Frame = +2

Query: 2    GTRNSRQINKKH*QENN*SFNVKFYMITKAMKDSKHSQAPIEDLSELRSYFASHNTTREY 181
            GT+ ++   +K  +  N   + K      A +  +  +AP+ D+ EL+   A+     EY
Sbjct: 1748 GTKKNKDTKQKESRTRNAESSRKSDTYRGANESRRDYRAPVADIDELKQSIANVQEQEEY 1807

Query: 182  IAHS 193
            +  S
Sbjct: 1808 VLSS 1811


>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
          Length = 1772

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWD 411
           GH   V   C+ +S   +L+T   DK++++WD
Sbjct: 210 GHINIVSTCCF-SSDEHMLATGSWDKNIQLWD 240


>SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 525

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 298 QDFI--FKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKG 453
           +DFI   +GH   V  + WH    +++++   D  + IWD      AA +  KG
Sbjct: 128 EDFIGHLQGHDRKVGIIRWHPCASNIIASAGFDDVIIIWDVERE--AAVLILKG 179


>SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36)
          Length = 885

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +1

Query: 316 GHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATIPTKGG 456
           GHT  V+ L  H     +L +   D  V++W+  +  C  TI    G
Sbjct: 64  GHTDGVNCLSRHPRSLSVLLSGSCDGEVKLWNLPTKDCLRTITAHKG 110


>SB_22072| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 642

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 307 IFKGHTGXVDQLCWHASHPDLLSTXXGDKSVRIWDTRSHKCAATI 441
           I K H   V  +CW      ++ T   D+S R++++ S++C   I
Sbjct: 228 ILKDHKHYVQGVCWDPLGQYVV-TNSSDRSCRLYNSLSYRCCYNI 271


>SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16)
          Length = 675

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 149 YFASHNTTREYIAHSSKVHSVGWSCDGRKLASG 247
           Y    +T R Y  H+  V S+    DGR +ASG
Sbjct: 162 YNLKKHTQRHYTQHTDDVKSLAVHPDGRTIASG 194


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,376,876
Number of Sequences: 59808
Number of extensions: 316556
Number of successful extensions: 764
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1361520496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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