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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060055.seq
         (695 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50550| Best HMM Match : RVT_1 (HMM E-Value=7.5e-28)                 30   1.6  
SB_39766| Best HMM Match : RVT_1 (HMM E-Value=1.8e-07)                 30   1.6  
SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_3720| Best HMM Match : RVT_1 (HMM E-Value=0.0031)                   30   1.6  
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_42168| Best HMM Match : NolV (HMM E-Value=7.1)                      30   1.6  
SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11)         30   1.6  
SB_26855| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_56872| Best HMM Match : RVT_1 (HMM E-Value=2.7e-30)                 29   2.7  
SB_51839| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)                    29   2.7  
SB_46263| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30)                 29   2.7  
SB_38578| Best HMM Match : RVT_1 (HMM E-Value=0.018)                   29   2.7  
SB_1034| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30)                  29   2.7  
SB_59736| Best HMM Match : RVT_1 (HMM E-Value=8.2e-31)                 29   2.7  
SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32)                 29   2.7  
SB_16993| Best HMM Match : RVT_1 (HMM E-Value=0.35)                    29   2.7  
SB_7284| Best HMM Match : F5_F8_type_C (HMM E-Value=7.3e-10)           29   2.7  
SB_3080| Best HMM Match : Methylase_S (HMM E-Value=2.6)                29   2.7  
SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_33430| Best HMM Match : RVT_1 (HMM E-Value=1.3e-26)                 29   4.8  
SB_28387| Best HMM Match : RVT_1 (HMM E-Value=0.0013)                  29   4.8  
SB_25574| Best HMM Match : Gp-FAR-1 (HMM E-Value=1.9)                  29   4.8  
SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07)              29   4.8  
SB_47528| Best HMM Match : RVT_1 (HMM E-Value=9.9e-16)                 29   4.8  
SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_28146| Best HMM Match : Na_Ca_ex (HMM E-Value=0.039)                29   4.8  
SB_16359| Best HMM Match : RVT_1 (HMM E-Value=0.00049)                 29   4.8  
SB_9990| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.8  
SB_5975| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.8  
SB_40922| Best HMM Match : JmjC (HMM E-Value=0.092)                    28   6.3  
SB_18419| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_21644| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_51421| Best HMM Match : VWA (HMM E-Value=3.5e-27)                   28   8.3  
SB_31994| Best HMM Match : CPSase_L_chain (HMM E-Value=0)              28   8.3  
SB_35068| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.3  

>SB_50550| Best HMM Match : RVT_1 (HMM E-Value=7.5e-28)
          Length = 434

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVK 665
           G+  + W++GDW P YK + +L        T+++  +K L+   SV+
Sbjct: 48  GAWPSAWKRGDWIPVYKKDDKLSKENYRPVTILSCVNKVLEKLVSVQ 94


>SB_39766| Best HMM Match : RVT_1 (HMM E-Value=1.8e-07)
          Length = 392

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVK 665
           G+  + W++GDW P YK + +L        T+++  +K L+   SV+
Sbjct: 131 GAWPSAWKRGDWIPVYKKDDKLSKENYRPVTILSCVNKVLEKLVSVQ 177


>SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2271

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = +3

Query: 546  GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVK 665
            G+  + W++GDW P YK + +L        T+++  +K L+   SV+
Sbjct: 1983 GAWPSAWKRGDWIPVYKKDDKLSKENYRPVTILSCVNKVLEKLVSVQ 2029


>SB_3720| Best HMM Match : RVT_1 (HMM E-Value=0.0031)
          Length = 546

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVK 665
           G+  + W++GDW P YK + +L        T+++  +K L+   SV+
Sbjct: 309 GAWPSAWKRGDWIPVYKKDDKLSKENYRPVTILSCVNKVLEKLVSVQ 355


>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2211

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVK 665
           G+  + W++GDW P YK + +L        T+++  +K L+   SV+
Sbjct: 711 GAWPSAWKRGDWIPVYKKDDKLSKENYRPVTILSCVNKVLEKLVSVQ 757


>SB_42168| Best HMM Match : NolV (HMM E-Value=7.1)
          Length = 414

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVK 665
           G+  + W++GDW P YK + +L        T+++  +K L+   SV+
Sbjct: 246 GAWPSAWKRGDWIPVYKKDDKLSKENYRPVTILSCVNKVLEKLVSVQ 292


>SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11)
          Length = 887

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVK 665
           G+  + W++GDW P YK + +L        T+++  +K L+   SV+
Sbjct: 732 GAWPSAWKRGDWIPVYKKDDKLSKENYRPVTILSCVNKVLEKLVSVQ 778


>SB_26855| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 272

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELKTLINHTSKTLDNADSVKTNNAI 680
           G     W++G+W P YK +  L+         L   D VK +  I
Sbjct: 190 GEWPEAWKKGEWNPVYKKDDRLERKNYRPITLLCIVDKVKIDEEI 234


>SB_56872| Best HMM Match : RVT_1 (HMM E-Value=2.7e-30)
          Length = 575

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVKTNN 674
           G     W++G+W P YK +  L+       TL+    K  ++  S + NN
Sbjct: 287 GEWPEAWKKGEWNPVYKKDDRLERKNYRPITLLCIVDKVYESMMSTQVNN 336


>SB_51839| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
          Length = 337

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVKTNN 674
           G     W++G+W P YK +  L+       TL+    K  ++  S + NN
Sbjct: 242 GEWPEAWKKGEWNPVYKKDDRLERKNYRPITLLCIVDKVYESMMSTQVNN 291


>SB_46263| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30)
          Length = 490

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVKTNN 674
           G     W++G+W P YK +  L+       TL+    K  ++  S + NN
Sbjct: 93  GEWPEAWKKGEWNPVYKKDDRLERKNYRPITLLCIVDKVYESMMSTQVNN 142


>SB_38578| Best HMM Match : RVT_1 (HMM E-Value=0.018)
          Length = 472

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVKTNN 674
           G     W++G+W P YK +  L+       TL+    K  ++  S + NN
Sbjct: 215 GEWPEAWKKGEWNPVYKKDDRLERKNYRPITLLCIVDKVYESMMSTQVNN 264


>SB_1034| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30)
          Length = 558

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVKTNN 674
           G     W++G+W P YK +  L+       TL+    K  ++  S + NN
Sbjct: 93  GEWPEAWKKGEWNPVYKKDDRLERKNYRPITLLCIVDKVYESMMSTQVNN 142


>SB_59736| Best HMM Match : RVT_1 (HMM E-Value=8.2e-31)
          Length = 326

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVKTNN 674
           G     W++G+W P YK +  L+       TL+    K  ++  S + NN
Sbjct: 38  GEWPEAWKKGEWNPVYKKDDRLERKNYRPITLLCIVDKVYESMMSTQVNN 87


>SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32)
          Length = 775

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVKTNN 674
           G     W++G+W P YK +  L+       TL+    K  ++  S + NN
Sbjct: 482 GEWPEAWKKGEWNPVYKKDDRLERKNYRPITLLCIVDKVYESMMSTQVNN 531


>SB_16993| Best HMM Match : RVT_1 (HMM E-Value=0.35)
          Length = 237

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVKTNN 674
           G     W++G+W P YK +  L+       TL+    K  ++  S + NN
Sbjct: 25  GEWPEAWKKGEWNPVYKKDDRLERKNYRPITLLCIVDKVYESMMSTQVNN 74


>SB_7284| Best HMM Match : F5_F8_type_C (HMM E-Value=7.3e-10)
          Length = 725

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVKTNN 674
           G     W++G+W P YK +  L+       TL+    K  ++  S + NN
Sbjct: 513 GEWPEAWKKGEWNPVYKKDDRLERKNYRPITLLCIVDKVYESMMSTQVNN 562


>SB_3080| Best HMM Match : Methylase_S (HMM E-Value=2.6)
          Length = 358

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVKTNN 674
           G     W++G+W P YK +  L+       TL+    K  ++  S + NN
Sbjct: 190 GEWPEAWKKGEWNPVYKKDDRLERKNYRPITLLCIVDKVYESMMSTQVNN 239


>SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 151

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 591 YKSEPELKTLINHTSKTLDNADSVKTNNAIADNDN 695
           Y+     +  IN  S+  D  DS+  NN I +NDN
Sbjct: 58  YQKHGHYQNNININSEIKDTKDSINNNNNIINNDN 92


>SB_33430| Best HMM Match : RVT_1 (HMM E-Value=1.3e-26)
          Length = 288

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +3

Query: 558 NTWRQGDWKPTYKSEPELKTLINHTSKTL 644
           + W++GDW P YK + +L +  N+ S T+
Sbjct: 5   SAWKRGDWIPVYKKDDKL-SKENYRSVTI 32


>SB_28387| Best HMM Match : RVT_1 (HMM E-Value=0.0013)
          Length = 220

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +3

Query: 558 NTWRQGDWKPTYKSEPELKTLINHTSKTL 644
           + W++GDW P YK + +L +  N+ S T+
Sbjct: 5   SAWKRGDWIPVYKKDDKL-SKENYRSVTI 32


>SB_25574| Best HMM Match : Gp-FAR-1 (HMM E-Value=1.9)
          Length = 324

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK 614
           G     W++G+W P YK +  L+
Sbjct: 287 GEWPEAWKKGEWNPVYKKDDRLE 309


>SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07)
          Length = 621

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +3

Query: 420 TSQNEAQ-GAGDRPPGPRASRGVRGP 494
           TS  E+Q G+G RP GP   +G  GP
Sbjct: 20  TSGTESQPGSGQRPQGPNGPQGPNGP 45


>SB_47528| Best HMM Match : RVT_1 (HMM E-Value=9.9e-16)
          Length = 228

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
 Frame = +3

Query: 558 NTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVK 665
           + W++GDW P YK + +L        T+++  +K L+   SV+
Sbjct: 5   SAWKRGDWIPVYKKDDKLSKENYRPVTILSCVNKVLEKLVSVQ 47


>SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1396

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 546  GSLSNTWRQGDWKPTYKSEPELK 614
            G     W++G+W P YK +  L+
Sbjct: 1359 GEWPEAWKKGEWNPVYKKDDRLE 1381


>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 681

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +3

Query: 336 VVRFELMEDGH--RFLASIGRRQTAANQSETSQNEAQGAGDRPPGPRASRGVRGP 494
           VV   L+ED H  R + S+ R++    Q     +        PPG R  RG RGP
Sbjct: 230 VVMSNLIEDEHISRAVISLLRQKWVDGQKGDRGDMGPPGHPGPPGVRGRRGKRGP 284


>SB_28146| Best HMM Match : Na_Ca_ex (HMM E-Value=0.039)
          Length = 751

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +3

Query: 546 GSLSNTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVKTNN 674
           G     W++G+W P YK +  L+       TL+    K  ++  S + NN
Sbjct: 311 GEWPEAWKKGEWNPFYKKDDHLERKNYRPITLLCIVDKVYESMMSTQVNN 360


>SB_16359| Best HMM Match : RVT_1 (HMM E-Value=0.00049)
          Length = 220

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
 Frame = +3

Query: 558 NTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVK 665
           + W++GDW P YK + +L        T+++  +K L+   SV+
Sbjct: 5   SAWKRGDWIPVYKKDDKLSKENYRPVTILSCVNKVLEKLVSVQ 47


>SB_9990| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 288

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
 Frame = +3

Query: 558 NTWRQGDWKPTYKSEPELK-------TLINHTSKTLDNADSVK 665
           + W++GDW P YK + +L        T+++  +K L+   SV+
Sbjct: 5   SAWKRGDWIPVYKKDDKLSKENYRPVTILSCVNKVLEKLVSVQ 47


>SB_5975| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 229

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 519 DVIFVHGLYGSLSNTWRQ 572
           D++FVHGL G    TWR+
Sbjct: 36  DIVFVHGLRGGPLKTWRR 53


>SB_40922| Best HMM Match : JmjC (HMM E-Value=0.092)
          Length = 403

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 471 HGVQVVGPRHPELRFDWSRF-DLRQSDGDQSMQENGD 364
           H VQ  GPR+  +   W+RF    Q+D D S+ ++ D
Sbjct: 246 HQVQSFGPRNLAVNIWWARFTQFNQTDCDTSIYKDKD 282


>SB_18419| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 911

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 388 VAVRLPQIKARPVKTKLRVPG-TDHLDPVPRVECVVLHEPPFLPSTSSSSMGYTDP 552
           V +       + +  ++RV   TDHL P  +  C VL+  P + S +   MGY  P
Sbjct: 689 VCIETKSKNGKRIMRRVRVVNKTDHLGPYLQRVCEVLNCCPEVVSATRYPMGYCSP 744


>SB_21644| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 787

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 380 CKKTVTVLHKLEAHHRSTAMKYGCSLTLPCPPF 282
           C+K  T L  + +H       Y C+ TLP P F
Sbjct: 726 CEKFNTFLENVTSHFAPPLDLYSCATTLPVPDF 758


>SB_51421| Best HMM Match : VWA (HMM E-Value=3.5e-27)
          Length = 576

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 545 RILKQHLASRRLETNIQKRTGIKDSDKPYFENSR*CRQ 658
           R+  Q +   R+ TN   R G+K  D+ YF+    C Q
Sbjct: 80  RVSTQKIGQFRIATNYPARMGVKLRDRRYFKGRVACLQ 117


>SB_31994| Best HMM Match : CPSase_L_chain (HMM E-Value=0)
          Length = 945

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 397 RLPQ-IKARPVKTKLRVPGTDHLDPV 471
           R PQ + A P+KT  R P T H DP+
Sbjct: 30  RTPQTVHADPLKTYTRTPQTVHADPI 55


>SB_35068| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 532

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = -3

Query: 492 DHALHARHGVQVVGPRHPELRFDWSRFDLRQSDGDQS 382
           D++L     ++V   R+P +RF W ++ ++ +  DQ+
Sbjct: 374 DNSLPPDQPIRVTSNRNPGVRFHWGKYQVKYTAFDQA 410


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,754,580
Number of Sequences: 59808
Number of extensions: 418273
Number of successful extensions: 1356
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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