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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021034
         (844 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19450| Best HMM Match : GTP_EFTU (HMM E-Value=7.9e-08)              83   2e-16
SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0)                     59   5e-09
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)                    58   9e-09
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)               46   4e-05
SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34)               44   2e-04
SB_35448| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-10)              41   0.001
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)              38   0.008
SB_25832| Best HMM Match : fn3 (HMM E-Value=4.2e-08)                   33   0.29 
SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0)                       30   2.7  
SB_35974| Best HMM Match : PUF (HMM E-Value=0.00065)                   30   2.7  
SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14)              30   2.7  
SB_23275| Best HMM Match : IncA (HMM E-Value=0.43)                     30   2.7  
SB_49596| Best HMM Match : HTH_psq (HMM E-Value=7.8)                   29   3.6  
SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012)               29   3.6  
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)                    29   3.6  
SB_9509| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.6  
SB_48476| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.2  
SB_4296| Best HMM Match : DUF1040 (HMM E-Value=0.24)                   29   6.2  
SB_25967| Best HMM Match : SapB_1 (HMM E-Value=2.6)                    29   6.2  

>SB_19450| Best HMM Match : GTP_EFTU (HMM E-Value=7.9e-08)
          Length = 926

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 40/84 (47%), Positives = 59/84 (70%)
 Frame = +2

Query: 257 LEKECQGILDLVEEKAIYFDGEYGEHVRLDEIPQDRRTEVKERRHELIEHLSNVDETLGE 436
           LE    G++D++  KA YFDG+ GE VR D IP+D   E ++RR ELIE +++VD  LG+
Sbjct: 676 LEGNNTGVVDIIRWKAYYFDGDNGEIVREDVIPEDMVDECRKRRQELIEVVADVDPELGD 735

Query: 437 LFLEEKTPTVNDLKQALRRSTLKR 508
           LFLEE  P+ + +  A+RR+T++R
Sbjct: 736 LFLEEVKPSESQIIAAIRRATIER 759



 Score = 81.8 bits (193), Expect = 6e-16
 Identities = 49/122 (40%), Positives = 69/122 (56%)
 Frame = +1

Query: 478  ASITAFHIKTTFTPVLLGTALKNKGIQPLLDAVLTYLPHPGEVENTALLNESKDGEGQTI 657
            A+I    I+ TFTPV +G+ALKNKG+Q       +   + G+   T   +   D +   +
Sbjct: 750  AAIRRATIERTFTPVFVGSALKNKGVQVPHQIDKSSFSY-GKTYATIDSDFCLDTK---V 805

Query: 658  VLDPTRDNKKPFVGLAFKLEVSQFGQLTYLRCYPGC*REVTIYSTPGLTKKVKISRLVRM 837
            ++D  R  + PFVGLAFKLE  ++GQLTYLR Y G  +           K+VK+ R+VRM
Sbjct: 806  LMDSRRSGEAPFVGLAFKLEAGRYGQLTYLRVYQGALKRGGFIVNTRTGKRVKVPRIVRM 865

Query: 838  HS 843
            HS
Sbjct: 866  HS 867



 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 37/73 (50%), Positives = 46/73 (63%)
 Frame = +3

Query: 90  VQSQTLTVNRQMKRYNVPCLAFINKLDRLGANPERVLKQMRSKLKHNAAFIHLPIA*KKS 269
           +QSQTLTVNRQMKRYNVPC+AFINKLDR             +KL HNAA + LP+  + +
Sbjct: 633 IQSQTLTVNRQMKRYNVPCIAFINKLDR-------------AKLNHNAALLQLPVGLEGN 679

Query: 270 VKEFWTLLRRKLY 308
                 ++R K Y
Sbjct: 680 NTGVVDIIRWKAY 692


>SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0)
          Length = 359

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
 Frame = +3

Query: 3   PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
           PGH DF  +  R L  +D  I+V+    GV+ QT  +    +  N+P + FINK+DR G 
Sbjct: 87  PGHKDFAEDTFRTLTAVDSVIVVIDVAKGVEEQTEKLVEVCRMRNIPMIVFINKMDREGK 146

Query: 183 NPERVLKQMRSKLKHNAAFIHLPIA*KKSVKEFWTLLRRKLYILM-VNMASMCGSMRFHK 359
           +   +L ++  KLK     +  PI      K  + +  + + +    +   +  ++ F+ 
Sbjct: 147 DAFDLLDEVEQKLKLTVCPLSFPIGMGYDFKGIYNIWEKNINLFSGDSRKDIEDTIAFND 206

Query: 360 IVEPKL 377
           I  P+L
Sbjct: 207 ITNPEL 212



 Score = 34.7 bits (76), Expect = 0.095
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 496 HIKTTFTPVLLGTALKNKGIQPLLDAVLTYLPHPGEVE-NTALLNESKD 639
           ++  T  PV  G+AL N G++ LLD  +   P P   E +T L++ ++D
Sbjct: 243 YLNGTLQPVFFGSALNNFGVRELLDCFIDIAPTPRPKESDTRLIDPNED 291


>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
          Length = 833

 Score = 58.0 bits (134), Expect = 9e-09
 Identities = 30/57 (52%), Positives = 38/57 (66%)
 Frame = +3

Query: 3   PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDR 173
           PGHVDF+ EV  ALRV DGA++V+  V GV  QT TV RQ     +  + F+NK+DR
Sbjct: 107 PGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKMDR 163


>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2670

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
 Frame = +3

Query: 6    GHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGAN 185
            GHVDF+ EV R+L    G +L++ +  GVQ+QT++         +  +  +NK+D   A 
Sbjct: 1995 GHVDFSYEVSRSLAACQGVVLLVDAAQGVQAQTVSNFFLAFNSELTIIPALNKIDLKTAK 2054

Query: 186  PERVLKQMRSKLKHNAAFIHLPIA*KKSVKEF-WTLLRRKLYILMVNMASM 335
             + V+ QM      N   I    A    V +  +  LR  L  L +N AS+
Sbjct: 2055 SDEVIHQMERLFDINQQDILKVYAGVYPVDQSEYVFLRNALEKLTLNDASV 2105


>SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34)
          Length = 240

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 23/69 (33%), Positives = 34/69 (49%)
 Frame = +3

Query: 3   PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGA 182
           PGH  FT    R  +V D  I+V+ +   V  QT       +   VP +  INK+D+  A
Sbjct: 146 PGHEAFTAMRARGAQVTDLVIIVVAADDDVMPQTKEAISHAQAAGVPIIFAINKIDKPNA 205

Query: 183 NPERVLKQM 209
           NP+ +  Q+
Sbjct: 206 NPDNIKTQL 214


>SB_35448| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-10)
          Length = 563

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +3

Query: 27  EVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNV-PCLAFINKLDRL 176
           +V  A+R+ DGA++V+  V GV  QT  V RQ    N+ PCL  +NK+DRL
Sbjct: 93  QVSTAVRLCDGALVVVDVVEGVSPQTHVVLRQAWLENIRPCLV-LNKIDRL 142



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +3

Query: 27  EVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNV-PCLAFINKLDRL 176
           +V  A+R+ DGA++V+  V GV  QT  V RQ    N+ PCL  +NK+DRL
Sbjct: 23  KVSTAVRLCDGALVVVDVVEGVSPQTHVVLRQAWLENIRPCLV-LNKIDRL 72


>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
          Length = 783

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 20/58 (34%), Positives = 32/58 (55%)
 Frame = +3

Query: 3   PGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRL 176
           PGH  F+    R   + D AILV+  + G++ QT+     +K+   P +  +NK+DRL
Sbjct: 686 PGHESFSNLRSRGSSLCDMAILVVDIMHGLEPQTIESINLLKKRKTPFVVALNKVDRL 743


>SB_25832| Best HMM Match : fn3 (HMM E-Value=4.2e-08)
          Length = 313

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = -3

Query: 722 LTSNLNAKPTNGFLLSLVGSNTMVWPSPSLL---SFNKAVFSTSPGCGRYVSTASSKG*I 552
           +TS+LNAK T+G+L +L     M  PS +     S +  V S  P  G    T +S   I
Sbjct: 164 MTSSLNAKLTDGYLGNLKAQVAMATPSNTGAREGSDSATVGSVGPAHGEGACTTNSDQFI 223

Query: 551 PLFFRAVPRSTG 516
           P  + AV   +G
Sbjct: 224 PTEYAAVLEKSG 235


>SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0)
          Length = 675

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -2

Query: 492 RRNACLRSLTVGVFSSRNNSPNVSSTFERCSINSC 388
           RR  C  S  V V     ++PN  +T+ERC++  C
Sbjct: 26  RRVTCADSRGVAVAERLCDAPNRPATYERCNVKPC 60


>SB_35974| Best HMM Match : PUF (HMM E-Value=0.00065)
          Length = 422

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 395 LIEHL--SNVDETLGELFLEEKTPTVNDLKQALRRSTLKRHSLQC 523
           L++HL  S  D  LGE  LEE  P + DL  A     + R +  C
Sbjct: 144 LVQHLLASTTDPDLGEEILEELLPEIEDLLAAGHDGVIARMAESC 188


>SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14)
          Length = 441

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/55 (23%), Positives = 27/55 (49%)
 Frame = +2

Query: 245 STNCLEKECQGILDLVEEKAIYFDGEYGEHVRLDEIPQDRRTEVKERRHELIEHL 409
           S + L   C  I+ +  +K  Y+ G Y  +V+  E  ++ + +   R  + I+H+
Sbjct: 170 SQDFLNGVCTNIIHMALKKLTYYGGNYDSYVKTREELEENQMKQYNREQDQIKHM 224


>SB_23275| Best HMM Match : IncA (HMM E-Value=0.43)
          Length = 1176

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +2

Query: 314 DGEYGEHVRL---DEIPQDRRTEVKERRHELIEHLSNVDETLGELFLEEK 454
           DG   EH+ L   +   Q+R   +  +  EL E  S +DETL E  LE +
Sbjct: 258 DGVINEHINLPRSETTNQERLRAIDRKNEELSERNSVIDETLEENQLERE 307


>SB_49596| Best HMM Match : HTH_psq (HMM E-Value=7.8)
          Length = 147

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = +2

Query: 356 QDRRTEVKERRHELIEHLSNVDETLGELFLEEKTPTVNDLKQALRRSTLKRHSL 517
           +D+R E KER H+L   L+ +D+T  +  + +    ++  KQ L  +T+K   L
Sbjct: 51  RDKRREHKERVHKLSLALATLDQTRKDAIIIK--DVISQTKQQLEVATIKSDDL 102


>SB_40403| Best HMM Match : Vicilin_N (HMM E-Value=0.012)
          Length = 1119

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 326 GEHVRLDEIPQDRRTEVKERRHE 394
           G HV++DE+P +R ++ + R+ E
Sbjct: 621 GVHVKVDEVPSERESDAERRKRE 643



 Score = 29.5 bits (63), Expect = 3.6
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 326  GEHVRLDEIPQDRRTEVKERRHE 394
            G HV++DE+P +R ++ + R+ E
Sbjct: 1093 GVHVKVDEVPSERESDAERRKRE 1115


>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
          Length = 1345

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = +2

Query: 356  QDRRTEVKERRHELIEHLSNVDETLGELFLEEKTPTVNDLKQALRRSTLKRHSL 517
            +D+R E KER H+L   L+ +D+T  +  + +    ++  KQ L  +T+K   L
Sbjct: 1249 RDKRREHKERVHKLSLALATLDQTRKDAIIIK--DVISQTKQQLEVATIKSDDL 1300


>SB_9509| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 169

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 371 EVKERRHELIEHLSNVDETL---GELFLEEKTPTVNDLKQALRRSTLKRHSLQCF 526
           E + +  E + H S  DET      L L+  T  V  LKQ+L R++   H   CF
Sbjct: 67  EGEYQNKEKVIHNSRKDETAQTDARLMLKNFTRDVGSLKQSLLRASSSYHMYPCF 121


>SB_48476| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 370

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 199 STLSGLAPNLSSLLINARHGTLYRFICLL 113
           S +SG   NL+S+     HG  Y + CLL
Sbjct: 21  SGVSGTTANLASIAPQCSHGAPYHYFCLL 49


>SB_4296| Best HMM Match : DUF1040 (HMM E-Value=0.24)
          Length = 227

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
 Frame = +2

Query: 257 LEKECQGILDLVEEKAIYFDGEYGEHVRLDEIP----QDRRTEVKERRHELIEHLSNVDE 424
           +EKEC G+L   + +         EH  L+EI      DR++E +  R +L +  SNVD+
Sbjct: 5   IEKECNGVLFCHKSEF------RKEHCVLEEIQIKADNDRKSERQNLRQQLGKIRSNVDK 58

Query: 425 TLGELFLEEKTPT-VNDLKQAL 487
              EL   + +P  V  LK+ +
Sbjct: 59  FQRELMDVKASPAFVQKLKEMM 80


>SB_25967| Best HMM Match : SapB_1 (HMM E-Value=2.6)
          Length = 140

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 236 IYTSTNCLEKECQGILDLVEEKAIYFDGE 322
           I  + N LEK+CQ I D+V+E+ I  D E
Sbjct: 57  IQNTLNTLEKDCQKISDIVDER-IEIDAE 84


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,669,558
Number of Sequences: 59808
Number of extensions: 563396
Number of successful extensions: 1448
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2383424791
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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