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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021030
         (758 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50433| Best HMM Match : MFAP1_C (HMM E-Value=0.24)                  35   0.062
SB_6364| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.77 
SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.3  
SB_47628| Best HMM Match : HEAT (HMM E-Value=1.3e-24)                  29   4.1  
SB_44902| Best HMM Match : EGF (HMM E-Value=9.6e-06)                   29   5.4  
SB_51288| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_46499| Best HMM Match : F-box (HMM E-Value=1.2e-11)                 28   7.2  
SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25)                    28   9.5  
SB_38766| Best HMM Match : 7tm_1 (HMM E-Value=1e-07)                   28   9.5  
SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  
SB_47328| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  

>SB_50433| Best HMM Match : MFAP1_C (HMM E-Value=0.24)
          Length = 536

 Score = 35.1 bits (77), Expect = 0.062
 Identities = 20/68 (29%), Positives = 32/68 (47%)
 Frame = +2

Query: 26  KTNQPAMPNLEVVSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSLATGIQL 205
           +T QP++   + V +   IP+V + +      Y   RE N L + S +  E S  T I+ 
Sbjct: 16  ETLQPSLQEQDFVRKAGDIPVVKTAVEKITSFYHSARERNHLTKVSFAAAELSFWTAIKT 75

Query: 206 ALPAVQLL 229
           +  A  LL
Sbjct: 76  SQFAYSLL 83


>SB_6364| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 357

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 225 SWKLRSYNWTVPLQVAGCGREEYAFNLYASRG 320
           SW+ R Y W    Q+    R+ + F+LY++RG
Sbjct: 220 SWRNRPYRWNNNNQLYRSSRKSFLFSLYSTRG 251


>SB_3164| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 623

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -1

Query: 641 SLGFGQSLPGESPLQLPLKPGSVLHRLGCPGPARLP 534
           SL   Q+   ++ L +PL P + L+ +  PGP R+P
Sbjct: 112 SLSEDQTKVSQTSLSMPLSPNATLNPMKHPGPRRIP 147


>SB_47628| Best HMM Match : HEAT (HMM E-Value=1.3e-24)
          Length = 921

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 274 PATCRGTVQLYDRSFQELNRREC*LY 197
           P+  RG V++YD S +E+  R C LY
Sbjct: 480 PSILRGRVEIYDHSPREMYLRSCYLY 505


>SB_44902| Best HMM Match : EGF (HMM E-Value=9.6e-06)
          Length = 335

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 553 GQPRRCSTEPGLRGSCRGDSPGKLWPKPRLSKNKS 657
           GQP+R     GL+ + RG++    WP   L KN S
Sbjct: 134 GQPKRGDIRVGLKYNIRGNNICNNWPAVFLMKNTS 168


>SB_51288| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 423

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
 Frame = +1

Query: 160 VYVPG*EVPSDRHTASTPGG--STPGNSDRTTGQFLCKSLDVVEKSMPSIYMPPEEMYSE 333
           V  PG  V +     STPG   STPG+   T G+ +    D V      +Y P + + + 
Sbjct: 206 VSTPGDHVSTPGDHVSTPGDHVSTPGDHVSTAGEHVSTPGDHVSTPGEHVYTPGDHV-TT 264

Query: 334 TRQYVLRRADSVTRLGTAV 390
              +V    D V+  G  V
Sbjct: 265 PGDHVSTPGDHVSTAGDHV 283



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
 Frame = +1

Query: 160 VYVPG*EVPSDRHTASTPGG--STPGNSDRTTGQFLCKSLDVVEKSMPSIYMPPEEMYSE 333
           V  PG  V +     STPG   STPG+   T G+ +    D V      +Y P + + + 
Sbjct: 304 VSTPGDHVFTPGDHVSTPGDHVSTPGDHVSTAGEHVSTPGDHVSTPGEHVYTPGDHV-TT 362

Query: 334 TRQYVLRRADSVTRLGTAVLDS 399
              +V    D V+  G  V  S
Sbjct: 363 PGDHVSTPGDHVSTAGDHVTTS 384


>SB_46499| Best HMM Match : F-box (HMM E-Value=1.2e-11)
          Length = 335

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 460 RICRRW*AHGRERSQWPPSSANPRQLCL 377
           ++CRRW   G++RS W      P  L L
Sbjct: 51  KVCRRWYHLGKDRSLWKAVDLRPWPLAL 78


>SB_59217| Best HMM Match : TRAUB (HMM E-Value=0.25)
          Length = 626

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +2

Query: 20  MTKTNQPAMPNLEVVSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSL 187
           +TK  + + P + V SR+ +   + +   +T+K   KI  + P+   S+ LG K L
Sbjct: 140 LTKLKKGSSPVIGVASRLGNKKEIDANGELTDKELAKIETAKPMTSASLKLGNKLL 195


>SB_38766| Best HMM Match : 7tm_1 (HMM E-Value=1e-07)
          Length = 625

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +1

Query: 238 DRTTGQFLCKSLDVVEKSMPSI 303
           D TTGQFLCK L  V  S P +
Sbjct: 378 DGTTGQFLCKLLYFVYASAPFV 399


>SB_13497| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 434

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 49  EP*SGLKGCIHTDRRVRYWSDRKIVLQNKGVQPSLSLVYV 168
           EP   ++GC++ D  V Y   R+++ Q  G    +S+ YV
Sbjct: 316 EPKELIEGCLYLDPGVGYDEARRLLKQEYGDPYKISIAYV 355


>SB_47328| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1634

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = -2

Query: 436  HGR-ERSQWPPSS--ANPRQLCLVASRNLHVGGRIDASL 329
            HGR E+ ++ P S   + + +  V  R + VGGR+DA+L
Sbjct: 1199 HGRHEKGEFAPLSPFVDDKGIIRVGGRIIRVGGRVDAAL 1237


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,924,864
Number of Sequences: 59808
Number of extensions: 552994
Number of successful extensions: 1610
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1610
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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