Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021022
(810 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 103 2e-22
SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0) 101 7e-22
SB_27800| Best HMM Match : CAP_GLY (HMM E-Value=2.5e-39) 82 6e-16
SB_25835| Best HMM Match : CAP_GLY (HMM E-Value=2.9e-32) 73 4e-13
SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28) 71 1e-12
SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23) 71 1e-12
SB_4343| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-19) 54 2e-07
SB_4005| Best HMM Match : CAP_GLY (HMM E-Value=5.8e-17) 48 1e-05
SB_8354| Best HMM Match : Pkinase (HMM E-Value=6.3e-15) 41 0.001
SB_54972| Best HMM Match : Syntaxin (HMM E-Value=1.6e-05) 40 0.003
SB_31088| Best HMM Match : CAP_GLY (HMM E-Value=2.2e-37) 37 0.022
SB_32300| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_47332| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_20308| Best HMM Match : TP2 (HMM E-Value=3.6) 29 5.9
SB_32744| Best HMM Match : Sulfatase (HMM E-Value=0) 29 5.9
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 103 bits (247), Expect = 2e-22
Identities = 46/89 (51%), Positives = 65/89 (73%)
Frame = +3
Query: 528 FIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGV 707
F +G+RV V TKPG IA++GET+FA G+WAGI+LD+P GKNDGSVAG +YF+C GV
Sbjct: 156 FQVGDRVLVNNTKPGVIAFLGETKFAKGDWAGIILDDPTGKNDGSVAGEKYFECKPLHGV 215
Query: 708 FSRLTRLTRVPFAIHTPHVHRPVSDAGSV 794
F++L ++T+V +P PV ++ S+
Sbjct: 216 FTKLEKITKVNQVTESP--GSPVENSSSL 242
Score = 92.3 bits (219), Expect = 4e-19
Identities = 43/99 (43%), Positives = 62/99 (62%)
Frame = +3
Query: 438 LFGRNTRVVSANWTTKVFRPQRDITEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEW 617
L G T++ +V E++ S IG+RV V G K G + Y+G T+FA GEW
Sbjct: 212 LHGVFTKLEKITKVNQVTESPGSPVENSSSLEIGDRVVVSGNKIGTLRYVGTTEFAKGEW 271
Query: 618 AGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLTR 734
AG+ LDEP+GKNDG+VAG RYFQC + G+F+ + ++ +
Sbjct: 272 AGVELDEPLGKNDGAVAGTRYFQCIQGYGLFAPVHKVIK 310
>SB_40639| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 709
Score = 101 bits (242), Expect = 7e-22
Identities = 43/94 (45%), Positives = 65/94 (69%)
Frame = +3
Query: 453 TRVVSANWTTKVFRPQRDITEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVL 632
TR++S + +P+ + +D + IGERV++GGTK G + + G T+FA GEW G+ L
Sbjct: 366 TRLLSEAEPLEAPKPETE-NQDANELTIGERVYIGGTKSGVLRFCGRTEFASGEWVGVEL 424
Query: 633 DEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLTR 734
D+P+GKNDGSV GV+YFQC G+F+ +++TR
Sbjct: 425 DQPVGKNDGSVDGVQYFQCEPNHGIFAPASKVTR 458
Score = 94.7 bits (225), Expect = 8e-20
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = +3
Query: 495 PQRDITEDTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGV 674
P+ D +E F IGE V V G KPG + +IG+TQFA G W GI L P+GKNDGSV GV
Sbjct: 510 PRLDDSEIARDFQIGEHVLVAGQKPGIVQFIGQTQFASGWWLGIELSNPVGKNDGSVGGV 569
Query: 675 RYFQCPEKRGVFSRLTRLTRVP 740
RYF C + GVF+ + ++T+ P
Sbjct: 570 RYFTCKPRFGVFAPVAKVTKNP 591
>SB_27800| Best HMM Match : CAP_GLY (HMM E-Value=2.5e-39)
Length = 246
Score = 81.8 bits (193), Expect = 6e-16
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = +3
Query: 498 QRDITEDTDSFIIGER--VWVGGTKP--GQIAYIGETQFAPGEWAGIVLDEPIGKNDGSV 665
+R +D ++ +G R V V G P G++ ++G T F PG W GI DEP+GKNDGSV
Sbjct: 148 ERQEQKDAEAIPVGSRCEVKVAGAPPKRGEVMFVGTTDFKPGYWVGIKYDEPLGKNDGSV 207
Query: 666 AGVRYFQCPEKRGVFSR 716
AG RYFQCP K G F R
Sbjct: 208 AGKRYFQCPPKYGGFVR 224
>SB_25835| Best HMM Match : CAP_GLY (HMM E-Value=2.9e-32)
Length = 640
Score = 72.5 bits (170), Expect = 4e-13
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +3
Query: 501 RDITEDTDS-----FIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSV 665
RD ED D +G + VG K G I +IG T+F+PG W G+ LD+ GKNDGSV
Sbjct: 456 RDDLEDWDESNLAGLSVGMAIEVGKGKTGVIRFIGATEFSPGPWVGVELDKAGGKNDGSV 515
Query: 666 AGVRYFQCPEKRGVFSR 716
+GVRYF C + G F R
Sbjct: 516 SGVRYFACKPRFGSFVR 532
>SB_41580| Best HMM Match : CAP_GLY (HMM E-Value=4.1e-28)
Length = 834
Score = 70.9 bits (166), Expect = 1e-12
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +3
Query: 564 KPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVF 710
+ G + + G T F+PGEW GIVLD+ GKNDGSV GVRYF C + G+F
Sbjct: 250 RTGLLQFTGTTHFSPGEWCGIVLDDACGKNDGSVKGVRYFDCKQDHGIF 298
>SB_26444| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-23)
Length = 1024
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/63 (47%), Positives = 41/63 (65%)
Frame = +3
Query: 570 GQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTRLTRVPFAI 749
G +AY+G TQFA G+W G+VLDE GKNDG+V G YF C + G+F R +++ +
Sbjct: 4 GTVAYVGATQFATGKWIGVVLDEKKGKNDGTVQGKEYFSCEDGYGIFVRQSQIIVLDSNT 63
Query: 750 HTP 758
TP
Sbjct: 64 STP 66
>SB_4343| Best HMM Match : CAP_GLY (HMM E-Value=1.2e-19)
Length = 898
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 516 DTDSFIIGERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGK-NDGSVAGVRYFQCP 692
+ F G+RV + G G + ++G T+ G+W GI +D+ + + ++GS G++YF C
Sbjct: 60 EVQKFNTGDRVHLRGYI-GTVKFVGATELGQGDWVGIEMDKELNQGHNGSYEGIQYFFCK 118
Query: 693 EKRGVFSR 716
K GVF+R
Sbjct: 119 PKHGVFAR 126
>SB_4005| Best HMM Match : CAP_GLY (HMM E-Value=5.8e-17)
Length = 560
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 537 GERVWVGGTKPGQIAYIGETQFAPGEWAGIVLD--EPIGKNDGSVAGVRYFQCPEKRGVF 710
G+RV V G G + ++G T G W GI LD +P G N GS YFQC K G+F
Sbjct: 86 GDRVHVRGYV-GTVKFVGCTSLGEGVWVGIALDKQQPQG-NSGSHQETSYFQCQPKHGLF 143
Query: 711 SR 716
+R
Sbjct: 144 AR 145
>SB_8354| Best HMM Match : Pkinase (HMM E-Value=6.3e-15)
Length = 280
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +3
Query: 609 GEWAGIVLDEPI-GKNDGSVAGVRYFQC 689
GEW G+ D+P GK+DGS+ GV+YF+C
Sbjct: 188 GEWYGVEWDDPKRGKHDGSIDGVKYFEC 215
>SB_54972| Best HMM Match : Syntaxin (HMM E-Value=1.6e-05)
Length = 175
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 254 REMIDKIQANVEEVKKKHSAILSAPQSDENGSS 352
RE IDKI +VE VKK HSA+LS+ D+ G S
Sbjct: 85 RENIDKIAQDVERVKKAHSAVLSSAVPDQAGKS 117
>SB_31088| Best HMM Match : CAP_GLY (HMM E-Value=2.2e-37)
Length = 947
Score = 36.7 bits (81), Expect = 0.022
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +3
Query: 546 VWVGGTKPGQIAYIGETQFAPGEWAGIVLDEPIGKNDGSVAGVRYFQCPEKRGVFSRLTR 725
VW G P + + P + G E +G +DG+ RYF CPE GVF L +
Sbjct: 135 VWFKGPLPTHDGTMFGVELTPNKPKG---SEQLGTSDGTFREKRYFTCPENCGVFVALDK 191
Query: 726 L 728
+
Sbjct: 192 I 192
Score = 35.1 bits (77), Expect = 0.068
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +3
Query: 570 GQIAYIGETQFAPGEW-AGIVLDEP-IGKNDGSVAGVRYFQCPEKRGVF 710
G I +IG+ + AG+ L+E G +DG+ G RYF+CP RG F
Sbjct: 572 GVIRWIGQLAELKNKLVAGLELEEEQSGCSDGTFKGKRYFECPPGRGFF 620
>SB_32300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 33.1 bits (72), Expect = 0.27
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Frame = +2
Query: 254 REMIDKIQANVEEVKKKHSAILSAPQSDENGS---STDTLRKLSDDLSRKHLSASSTFSA 424
R+ +D++Q ++ +K++H +SA D+ S +++ K +DLS++ + SSTF
Sbjct: 254 RDDLDQLQQQLKHIKEQHITEISA-MDDKMKSLRLELESVSKQKNDLSKQFETQSSTFEN 312
Query: 425 TSMDALWEKHARRLSELDYEGLQTTA 502
TS + E + L + E LQ +A
Sbjct: 313 TSRETQVELN---LIRKEKEQLQVSA 335
>SB_47332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 32.3 bits (70), Expect = 0.48
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 540 ERVWVGGTKPGQIAYIGETQFAPGEWAGIVLDE 638
E +W G G + Y G PGEW GI LD+
Sbjct: 14 EVLWRGEVCKGAVRYTGMLVAKPGEWIGIELDD 46
>SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 618 AGIVL--DEPIGKNDGSVAGVRYFQCPEKRGVFSRL 719
AG+ L D+ +G N G+ GVRYF KRG F RL
Sbjct: 519 AGVELSTDDRLGTN-GTYRGVRYFVTTPKRGYFFRL 553
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 257 EMIDKIQANVEEVKKKHSAILSAPQSDENGSSTDTLRKLSDDL 385
+ + + + VEE+KK+H L A ++D + + L+K +D+
Sbjct: 2004 QKVQESEQMVEELKKQHEDALLAAEADYHSKMEEMLKKNEEDM 2046
>SB_20308| Best HMM Match : TP2 (HMM E-Value=3.6)
Length = 318
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 150 APLTCPSSSFTENHAPSKRFFSLHNPIQRYFSNK 49
AP+ SSF + P +RF S +P +R+ S++
Sbjct: 171 APINISRSSFLISEDPKERFLSSEDPKERFLSSE 204
>SB_32744| Best HMM Match : Sulfatase (HMM E-Value=0)
Length = 485
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 644 NWLVEYYPSPLSGSKLRFSDISNLSRFRT 558
+WL+ PSP+S S + +SD +R+RT
Sbjct: 234 HWLLRSTPSPMSASSVAYSDDVFRNRWRT 262
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,307,448
Number of Sequences: 59808
Number of extensions: 465408
Number of successful extensions: 1422
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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