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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021020
         (832 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)             163   2e-40
SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.093
SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.21 
SB_47269| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.38 
SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10)                 33   0.38 
SB_53037| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.66 
SB_50276| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)                   30   2.0  
SB_23461| Best HMM Match : DUF504 (HMM E-Value=0.0038)                 30   2.6  
SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.5  
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)                   29   3.5  
SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004)                  29   4.6  
SB_53801| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.1  
SB_58169| Best HMM Match : zf-CCCH (HMM E-Value=0.0035)                28   8.1  
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)            28   8.1  
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)                 28   8.1  

>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 550

 Score =  163 bits (395), Expect = 2e-40
 Identities = 65/85 (76%), Positives = 81/85 (95%)
 Frame = +3

Query: 255 GKECKICSRPFTVFRWCPGARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDAAL 434
           G+ECKIC+RPFT+FRWCPGARMRFKKTEICQTCSKLKN+CQTCLLDLEYGLP+QVRD +L
Sbjct: 113 GRECKICARPFTIFRWCPGARMRFKKTEICQTCSKLKNICQTCLLDLEYGLPVQVRDKSL 172

Query: 435 KVQDDLPRNEVNKEYYIQNLESQLS 509
            ++D++P+++VNKEYY QN+E +L+
Sbjct: 173 GLKDEMPKSDVNKEYYTQNVERELA 197



 Score =  153 bits (371), Expect = 2e-37
 Identities = 65/85 (76%), Positives = 75/85 (88%), Gaps = 2/85 (2%)
 Frame = +2

Query: 509 NSDPTQPTNSLKSKGS--SDLLVRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRHEK 682
           +SD T P  +L+ K +  SDLL++LART PYYKRNRPH+CSFWVKGEC+RGEECPYRH+ 
Sbjct: 198 DSDGTSPGGALQGKANAPSDLLMKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHDM 257

Query: 683 PTDPDDPLADQNIKDRYYGVNDPVA 757
           PTDP+DPLADQNIKDRYYGVNDPVA
Sbjct: 258 PTDPNDPLADQNIKDRYYGVNDPVA 282



 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +1

Query: 133 MATSKSTNTYNRQNWEDA 186
           MATSKS NTYNRQNWEDA
Sbjct: 90  MATSKSANTYNRQNWEDA 107


>SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2142

 Score = 34.7 bits (76), Expect = 0.093
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +2

Query: 590  PYYKRNRPHV----CSFWVKGECRRGEECPYRH-EKPTDPDDPLADQNIKDRYYGVNDPV 754
            P+Y +   H     C F+ KG C +G+ C Y H ++ + P  P   + +    Y V +P+
Sbjct: 1337 PFYDQRYIHQPTIPCRFFAKGNCLKGDRCLYLHAQEASHPMPPTFTETVTCSSYEVTNPL 1396


>SB_11425| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 339

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 605 NRPHVCSFWVKGECRRGEECPYRHEKPTDPD 697
           N+ + C ++ KG C  G EC + H  PT+ D
Sbjct: 183 NKHYYCIYFAKGCCHLGAECGFIHSIPTEKD 213


>SB_47269| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 720

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 614 HVCSFWVKGECRRGEECPYRHE 679
           HVC +++KG+C  G++C   H+
Sbjct: 98  HVCPYYIKGKCAHGQKCRLSHK 119


>SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10)
          Length = 508

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 590 PYYKRNRPHVCSFWVK-GECRRGEECPYRHEKPTDPDDPLADQN 718
           P     R  VC F+ K G CR GE+C + H++    +D  ++++
Sbjct: 33  PIENARRQKVCRFYAKKGNCRFGEKCRFVHKEIISKEDDKSERS 76


>SB_53037| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 499

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 569 VRLARTAPYYKRNRPHVCSFWVKGECRRGEECPYRH 676
           V+L+  AP  K  +  VC  + KG+CR GE+C + H
Sbjct: 95  VQLSEQAPTLK-GKKRVCWKFQKGKCRFGEKCKFVH 129


>SB_50276| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1048

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 617 VCSFWVKGECRRGEECPYRH 676
           +CS+++ G C +GE CP  H
Sbjct: 365 MCSYYLNGNCSQGENCPRWH 384



 Score = 29.5 bits (63), Expect = 3.5
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 605 NRPHVCSFWVKGECRRGEECPYRHEKPTDPDDPLADQN 718
           N PH+C  +V G+C   E+C   H  P    D  AD N
Sbjct: 435 NMPHICEQYVAGKC--DEKCSGIHACPGFVIDECADGN 470



 Score = 28.7 bits (61), Expect = 6.1
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 599  KRNRPHVCSFWVKGECRRGEECPYRHE 679
            K NR HVC  +++ +CRR + C + HE
Sbjct: 944  KCNRIHVCKKFIQRKCRR-KNCFFMHE 969


>SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)
          Length = 1199

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +2

Query: 302 VSWSKNAFQENGNMPDLFETEKCLSNMFIGF---GIWSANPSERCCIKSS 442
           ++W   AFQ   +   + +TE    N+ +G+   G+W + P+E   + SS
Sbjct: 770 ITWEIGAFQREESQNVIRDTEWNTRNVVLGYDVAGVWRSTPTEENLVTSS 819


>SB_23461| Best HMM Match : DUF504 (HMM E-Value=0.0038)
          Length = 657

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 590 PYYKRNRPHVCSFWVKGECRRGEECPYRH 676
           P  K      C F++ G+CR GE+C  +H
Sbjct: 27  PDNKMEEQAACKFFLLGQCRYGEQCFNKH 55


>SB_49133| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1331

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +2

Query: 617 VC-SFWVKGECRRGEECPYRH 676
           +C  F + GEC RGE C  RH
Sbjct: 923 ICREFMMSGECHRGENCKLRH 943


>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
          Length = 650

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 605 NRPHVCSFWVKGE-CRRGEECPYRHE 679
           N   +CSF  +GE C RG+ C Y H+
Sbjct: 62  NSSKLCSFAARGEECTRGDSCFYGHD 87


>SB_2244| Best HMM Match : zf-CCCH (HMM E-Value=0.004)
          Length = 445

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 599 KRNRPHVCSFWVKGE-CRRGEECPYRH 676
           +RN P VC  +V    C RGE+C + H
Sbjct: 411 RRNPPPVCRHFVSNRGCLRGEQCHFLH 437


>SB_53801| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 500

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +2

Query: 53  M*KWEISVLFDRVSCVESKIISRKDTPWLHRSQQTHTIVRIGKTPI 190
           M KWEI  L   +SCVE +  S      LHR  + +T++ I KT +
Sbjct: 89  MPKWEIDFLTFPLSCVEQEFAS------LHRVLRRNTVLDILKTDV 128


>SB_58169| Best HMM Match : zf-CCCH (HMM E-Value=0.0035)
          Length = 289

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +2

Query: 614 HVCSFWVKGECRRGEECPYRH---EKPTDPDDPLADQNIK 724
           ++C F++KG CR G  C   H   E   + DD     +IK
Sbjct: 161 NICRFYLKGNCRYGYLCKKSHAVEEVEEEKDDRHLQTDIK 200


>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
          Length = 446

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 470 QGILHTKLGESAVNSDPTQPTNSLKSKGSSDLLVRLARTAPYYKRNRP 613
           + + H K  E+  + + T  TNS     +    VR++     +KRNRP
Sbjct: 237 KSLFHDKWSENGEDRNSTGKTNSSNENITVSNSVRMSEGKSVFKRNRP 284


>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1207

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 315 RMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDAAL 434
           +++ KKTEI    S   ++    L D +Y LP +V DAA+
Sbjct: 370 KIQDKKTEIESHMSGANSIFLRTLFDKKYALPYRVIDAAV 409


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,118,929
Number of Sequences: 59808
Number of extensions: 566388
Number of successful extensions: 1376
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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