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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021011
         (753 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)                  92   5e-19
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)              84   1e-16
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)                  67   2e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)               59   4e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0)                         57   2e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)                  56   3e-08
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)              54   9e-08
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)              54   9e-08
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)              51   9e-07
SB_37351| Best HMM Match : DEAD (HMM E-Value=0)                        50   2e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)            49   5e-06
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)                  48   6e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0)                        48   8e-06
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   8e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   1e-04
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   2e-04
SB_9558| Best HMM Match : DEAD (HMM E-Value=0)                         44   2e-04
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)               42   7e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)                42   7e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   0.001
SB_17563| Best HMM Match : DEAD (HMM E-Value=0)                        38   0.007
SB_2247| Best HMM Match : DEAD (HMM E-Value=0)                         38   0.007
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)                   38   0.012
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)              37   0.015
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)                  36   0.047
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)                  33   0.19 
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)                   33   0.25 
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.0  
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.3  
SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)                 29   4.1  
SB_32980| Best HMM Match : DEAD (HMM E-Value=0)                        28   7.1  
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)                  28   9.4  
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)               28   9.4  

>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
          Length = 690

 Score = 91.9 bits (218), Expect = 5e-19
 Identities = 41/67 (61%), Positives = 52/67 (77%)
 Frame = +2

Query: 551 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 730
           +ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA   G    +R+TC++GGAPK
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPK 172

Query: 731 REQARDL 751
             Q R+L
Sbjct: 173 GPQIREL 179



 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = +1

Query: 313 RSPYEVEEYRNNHEVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQ 480
           R  +EV+ YR + ++TV+G  V  P+  FEE+ FPDY+Q   K  G+ EPT IQAQ
Sbjct: 57  RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112


>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 790

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 40/76 (52%), Positives = 51/76 (67%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
           +TGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI   A  FG    +  
Sbjct: 562 KTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHV 621

Query: 704 TCVFGGAPKREQARDL 751
             VFGG  K EQ++ L
Sbjct: 622 VAVFGGGNKYEQSKAL 637



 Score = 72.5 bits (170), Expect = 3e-13
 Identities = 31/89 (34%), Positives = 48/89 (53%)
 Frame = +1

Query: 241 PRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQXFEEANFPD 420
           P    +  +PFNKNFY+ HP + K+S  E+++ R    + VSG     P   F    F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526

Query: 421 YVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
            +   ++ + Y +PT IQ Q  PIA+SG+
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGR 555


>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
          Length = 428

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFGHTS 691
           +TGSGKT A+ +P +V I   P I R +    GP AL+LAPTRELAQQI++    FG   
Sbjct: 146 ETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPL 205

Query: 692 YVRNTCVFGGAPK 730
            +R   V GGA +
Sbjct: 206 GIRTVSVIGGADR 218



 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 20/57 (35%), Positives = 34/57 (59%)
 Frame = +1

Query: 337 YRNNHEVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
           +R +  ++  G  +  PI+ ++EA  PD + + V  +GYK+PTPIQ Q  PI +  +
Sbjct: 83  FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNR 139


>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 592

 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQXFEEANFPDYVQQ 432
           V  QPF K+FY   P + K +P E +E+R + E + V G     P++ + +      +  
Sbjct: 59  VVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILD 118

Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
            +K   Y++PTPIQAQ  P+ MSG+
Sbjct: 119 VLKKNSYEKPTPIQAQAIPVIMSGR 143



 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 26/71 (36%), Positives = 35/71 (49%)
 Frame = +2

Query: 539 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 718
           K  +Y  P  +     P I  G   IA+V+ PTRELA QI +    F   + +R  CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180

Query: 719 GAPKREQARDL 751
           G    EQ  +L
Sbjct: 181 GTGISEQIAEL 191


>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
          Length = 1238

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 658
           +TGSGKTLAY LP  + +  + P   GD P+AL+L PTREL QQ+
Sbjct: 117 ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = +1

Query: 271 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMG 450
           F  ++YD +  V + S   V+E R  + + + G +   PI+ F + N P  +   +    
Sbjct: 32  FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91

Query: 451 YKEPTPIQAQGWPIAMSGK 507
           ++ PTPIQ Q     MSG+
Sbjct: 92  FQVPTPIQMQSLSCVMSGR 110


>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
          Length = 500

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 24/74 (32%), Positives = 41/74 (55%)
 Frame = +1

Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPT 465
           Y  HPT+   +  +V++ R+  E+ V G  V +P+  F   +F + + + +   GY  PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220

Query: 466 PIQAQGWPIAMSGK 507
           PIQ Q  P+ +SG+
Sbjct: 221 PIQMQVLPVLLSGR 234


>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 797

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 31/76 (40%), Positives = 41/76 (53%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
           QTGSGKT AY+LP +  +  Q        P+AL +APTRELA+QI   A  F   + ++ 
Sbjct: 524 QTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKV 583

Query: 704 TCVFGGAPKREQARDL 751
              +GG     QA  L
Sbjct: 584 CVCYGGVSVPYQASQL 599



 Score = 37.9 bits (84), Expect = 0.009
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +1

Query: 361 VSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
           VSG      I  F E  F + +   +   GY+ PTP+Q    PI M+G+
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGR 517


>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1170

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTS 691
           QTGSGKT A++LP +  + N             P A+ +APTRELA QI   A  F H +
Sbjct: 756 QTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGT 815

Query: 692 YVRNTCVFGGAPKREQARDL 751
            +R    +GG     Q R L
Sbjct: 816 MLRPVVCYGGVSVSHQLRQL 835



 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = +1

Query: 352 EVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
           EV VSG      I  FEEAN  +     V+   YK+PTP+Q    PI ++G+
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGR 749


>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 478

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = +2

Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSY 694
           + Q+G+GKT  + +  +  I+     + G D   ALVLAPTRELAQQIQ+V    G   +
Sbjct: 128 QAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMH 187

Query: 695 VRNTCVFGGAPKREQARDL 751
           V+     GG   RE    L
Sbjct: 188 VKCHACIGGTNVREDRMKL 206


>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 688

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
 Frame = +2

Query: 518 RTQTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 694
           + +TG+GKTL++ LP +  + + +   +RG  P  LV+APTRELA+Q+     +    S 
Sbjct: 116 QARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQVGNEFENL--KSN 173

Query: 695 VRNTCVFGGAPKREQ 739
           +   C++GG P   Q
Sbjct: 174 LEVYCIYGGMPYEPQ 188


>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
          Length = 1058

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
 Frame = +1

Query: 325 EVEEYRNNHEVTVSGVEVHNPIQXF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 492
           ++  +R+   + V G +V +P++ F    E   FPDY+   V+  GY  PTPIQ Q  P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196

Query: 493 AMSG 504
              G
Sbjct: 197 MAHG 200



 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +2

Query: 551 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 658
           Y  P  + +   P +  G    G  A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221


>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
          Length = 978

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVAADFGHT 688
           QTGSGKTLAY+ P +VH   +   R G       P A ++ P RELA QI + A    H 
Sbjct: 423 QTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTAKSLCHH 481

Query: 689 SYVRNTCVFGGAPKREQARDL 751
           +  R+  + GG  ++    DL
Sbjct: 482 ARFRSVGLIGGRKQKWMRDDL 502


>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 340

 Score = 48.0 bits (109), Expect = 8e-06
 Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
           +TGSGKTLA+++P I  +  Q      DG  ALV++PTRELA Q  +V    G+   +  
Sbjct: 95  KTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSA 153

Query: 704 TCVFGGAP-KREQAR 745
             + GG   K EQ R
Sbjct: 154 GLIIGGKDLKNEQKR 168



 Score = 31.1 bits (67), Expect = 1.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 388 IQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
           ++ F +         G+   G+  PT IQ QG P+A+SG+
Sbjct: 49  VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGR 88


>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 370

 Score = 44.8 bits (101), Expect = 8e-05
 Identities = 30/78 (38%), Positives = 41/78 (52%)
 Frame = +2

Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 697
           + Q+G+GKT  + +  +  I+ Q  +R    P ALVL+PTRELA QIQ+V    G    V
Sbjct: 40  QAQSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGDYMSV 94

Query: 698 RNTCVFGGAPKREQARDL 751
           +     GG    E  R L
Sbjct: 95  QCHACIGGTNIGEDIRKL 112


>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1039

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 23/66 (34%), Positives = 38/66 (57%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
           +TGSGKT A+++P    +          G  AL+L+PTRELA Q Q+   + G  + +++
Sbjct: 326 RTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQKFIKELGRFTGLKS 382

Query: 704 TCVFGG 721
           + + GG
Sbjct: 383 SVILGG 388


>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1448

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 24/76 (31%), Positives = 42/76 (55%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
           +TGSGKTLA+++P +V +  +   +  +G   ++++PTREL+ Q   VA D         
Sbjct: 617 KTGSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTY 675

Query: 704 TCVFGGAPKREQARDL 751
             + GG  ++ +A  L
Sbjct: 676 GIIMGGVNRKAEAERL 691


>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 436

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 28/76 (36%), Positives = 38/76 (50%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
           +TGSGKT A+ LP +  + + P      G  A+VL PTRELA QI       G    ++ 
Sbjct: 52  KTGSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQIADQFKVLGRPIGLKE 106

Query: 704 TCVFGGAPKREQARDL 751
             + GG    +QA  L
Sbjct: 107 AVIVGGLDMMKQALSL 122


>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
          Length = 238

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 27/73 (36%), Positives = 36/73 (49%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 703
           +TGSGKT A+ LP +  + + P         AL+L PTRELA QI +     G    V+ 
Sbjct: 9   ETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALGSGIGVKC 63

Query: 704 TCVFGGAPKREQA 742
             + GG     QA
Sbjct: 64  AVIVGGIDMMSQA 76


>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
          Length = 185

 Score = 41.5 bits (93), Expect = 7e-04
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = +1

Query: 352 EVTVSGVEVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
           EV VSG      I  FEEAN  +     V+   YK+PTP+Q    PI ++G+
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGR 172


>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 697

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 16/88 (18%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQIQ 661
           +TGSGKTLA+ +P I HI         Q P         +G   +AL++APTRELA Q++
Sbjct: 176 ETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235

Query: 662 QVAADFGHTSYVRNTCVFGG--APKREQ 739
                    + V+   + GG  APK+++
Sbjct: 236 DHLVKAAKYTSVKVAAIVGGMAAPKQQR 263


>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = +2

Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 682
           R + G+GKT AY++P +   +      +     ALVL PTRELA Q  Q+  + G
Sbjct: 90  RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519
           FE+      +  G+   G+ +P+PIQ +  P+A++G+  LA
Sbjct: 49  FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89


>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 439

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = +2

Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 682
           R + G+GKT AY++P +   +      +     ALVL PTRELA Q  Q+  + G
Sbjct: 90  RAKNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519
           FE+      +  G+   G+ +P+PIQ +  P+A++G+  LA
Sbjct: 49  FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILA 89


>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
          Length = 120

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 22/47 (46%), Positives = 25/47 (53%)
 Frame = +2

Query: 611 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 751
           P ALVL+PTRELA QIQ+V    G    V+     GG    E  R L
Sbjct: 4   PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKL 50


>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
          Length = 490

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
 Frame = +2

Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 694
           ++Q+G+GKT A++L  +  ++   P      P  + L+PT ELA+Q  +VA   G H  +
Sbjct: 148 QSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHCPH 202

Query: 695 VR-NTCVFGGA-PKREQARD 748
           ++ N  V G   P+ ++  D
Sbjct: 203 IKINYAVRGNQFPRGQKCTD 222



 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +1

Query: 349 HEVTVSGVEVHNPI---QXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 501
           HEV V   +  +P+   + FEE      +++GV  MG+ +P+ IQ    P+ ++
Sbjct: 86  HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139


>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
          Length = 559

 Score = 35.5 bits (78), Expect = 0.047
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = +2

Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSY 694
           +++TG+GK+L ++LP++     Q P  RG G I  ++ PTRELA Q + +V+   G  S 
Sbjct: 203 KSETGTGKSLVFLLPSV-----QDP-GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSI 254

Query: 695 V 697
           V
Sbjct: 255 V 255


>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
          Length = 456

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = +2

Query: 530 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 697
           GSGK LAY+LP I  I      +     +GP+ L+L    +   ++  V  D   +    
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293

Query: 698 RNTCVFGGAPKREQ 739
           R   +FGG  + ++
Sbjct: 294 RVQMIFGGGAEEDR 307


>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
          Length = 96

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = +2

Query: 527 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 655
           TG+GKT A++LP +  +  +P   +      LV+ PTRELA Q
Sbjct: 56  TGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +1

Query: 430 QGVKTMGYKEPTPIQAQGWPIAMSGK 507
           + V  +G+  PTPIQA   P+A+ GK
Sbjct: 23  RAVNELGFLHPTPIQASTIPVALMGK 48


>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 480

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +1

Query: 373 EVHNPIQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 486
           ++H P++   +  FP Y +       Y  P P QA  W
Sbjct: 6   DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43


>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1375

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 388 IQXFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
           I  FE+ +  + +   V   GYK+PTP+Q    PI + GK
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPI-VKGK 912



 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 524 QTGSGKTLAYILPAIVHINNQPP 592
           QTGSGKT A+++P +  I  + P
Sbjct: 920 QTGSGKTAAFLIPILSRIYMEGP 942


>SB_26138| Best HMM Match : RhoGEF (HMM E-Value=0.0011)
          Length = 1199

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 227 QNMRRPDWDLFHSNLSTKTFMIHILQFSKD 316
           +N RR  WD FHSN+S  +   H+  F  D
Sbjct: 768 RNKRR--WDSFHSNVSADSGSAHMFDFDTD 795


>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
          Length = 985

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
 Frame = +2

Query: 518 RTQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HTSY 694
           + ++G+GKT  + + A+ ++     I   +    ++L PTRE+A Q++ V    G H   
Sbjct: 56  QAKSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIGCHYDG 110

Query: 695 VRNTCVFGGAPKREQARDL 751
           +      GG    E  + L
Sbjct: 111 LACKVFIGGISLEEDKKAL 129


>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 728

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -2

Query: 233 CSDLQRILFSHQILQILQIYCHRC-QIETN 147
           CS    +L   +IL+   +YC +C Q ETN
Sbjct: 14  CSLCSEVLTEPKILRCFHVYCQKCLQAETN 43


>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
          Length = 401

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -2

Query: 164 CQIETNYRRICCLLQIWN-HRFHGYYSS 84
           C +  +YRR CC L +W  H  + Y+SS
Sbjct: 218 CCVRVDYRRKCC-LHVWRVHTTNTYWSS 244


>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
          Length = 1093

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 19/75 (25%), Positives = 36/75 (48%)
 Frame = +2

Query: 521 TQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 700
           TQT    +L   +P  +HIN+  P R    PI + + PT+  +  I  ++ D   ++  +
Sbjct: 430 TQTTKPASLRVNVPLSLHINDSSPTRL-SFPITMDVHPTKTTSVTI-PISEDMQTSTIAK 487

Query: 701 NTCVFGGAPKREQAR 745
            T  F  +  +E ++
Sbjct: 488 QTSSFPRSNDKEASK 502


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,450,560
Number of Sequences: 59808
Number of extensions: 464476
Number of successful extensions: 1212
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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