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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021007
         (698 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)              97   2e-20
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)              71   1e-12
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)              57   1e-08
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)             48   7e-06
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)                   45   7e-05
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)             42   5e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)           40   0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)             39   0.003
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)                   38   0.010
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)         37   0.018
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)                   36   0.024
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)              36   0.024
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.042
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.13 
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.13 
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)                    34   0.13 
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.39 
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)                   32   0.51 
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)                  31   0.68 
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)                   30   1.6  
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)             30   1.6  
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)                 30   1.6  
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)                 30   2.1  
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)             30   2.1  
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)                   29   2.7  
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.7  
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)                       29   2.7  
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)                   29   3.6  
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)                 29   3.6  
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)                 29   3.6  
SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.8  
SB_34515| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.3  
SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11)               28   6.3  

>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 304

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 48/82 (58%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
 Frame = +2

Query: 257 AAVSKTAVHPIMRVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 433
           A +SKTA  PI RVKLL+Q Q  + K    D  YKG++D   R  + +G LSFWRGN AN
Sbjct: 20  AIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLAN 79

Query: 434 VIRYFPTQALNFAFKDKYKQVF 499
            IRYFPTQALNFAFKD+ K +F
Sbjct: 80  CIRYFPTQALNFAFKDQVKALF 101



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
 Frame = +1

Query: 580 SLCFVYPLDFARTRLAAD--VGKGDGQREFSGL 672
           SL FVY LD+ RTRLA D  VGK  G+R+F+G+
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGERQFNGM 159



 Score = 36.7 bits (81), Expect = 0.018
 Identities = 16/51 (31%), Positives = 32/51 (62%)
 Frame = +2

Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
           +YKG +D  ++I K++G +S  +G  AN++R      +   F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297


>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 262

 Score = 70.5 bits (165), Expect = 1e-12
 Identities = 33/78 (42%), Positives = 54/78 (69%)
 Frame = +2

Query: 260 AVSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
           AVS+T+V P+ RVK+LLQ+Q        + ++KG++   ++I KE+G+L +++GN  NVI
Sbjct: 46  AVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVI 99

Query: 440 RYFPTQALNFAFKDKYKQ 493
           R FP  A+ FA  ++YK+
Sbjct: 100 RIFPYSAVQFAAYEEYKK 117


>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 453

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 38/98 (38%), Positives = 56/98 (57%)
 Frame = +2

Query: 257 AAVSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
           A VS+TA  P+ R+K+LLQVQ      A+     GIV  F  + +E G+ S WRGN ANV
Sbjct: 147 AGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGANV 200

Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTRRRSSGVTSLVI 550
           I+  P   + F   +K K++ +G  T  ++ GVT  ++
Sbjct: 201 IKIAPESGIKFFAYEKAKKL-VGSDT--KALGVTDRLL 235



 Score = 35.1 bits (77), Expect = 0.055
 Identities = 19/79 (24%), Positives = 43/79 (54%)
 Frame = +2

Query: 266 SKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 445
           S+T+++P+  +K  L ++   +       Y+G++ A   I +++G+ SF+RG F +++  
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFPSLLGI 296

Query: 446 FPTQALNFAFKDKYKQVFL 502
            P   ++ A  +  K  +L
Sbjct: 297 IPYAGIDLAVYETLKNFYL 315


>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
          Length = 76

 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = +2

Query: 257 AAVSKTAVHPIMRVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 418
           A +SKTA  PI RVKLL+Q Q  + K       YKG+VD  +R  + +G+ SFWR
Sbjct: 21  AIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75


>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 375

 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +2

Query: 308 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 472
           L+V  V  Q+   +   G++  F  + K +G+ +FW+GN  + IR FP  A+ +A
Sbjct: 79  LEVVKVLAQVGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = +2

Query: 263 VSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
           ++   V+P   +K  L VQHV+K  A    YKG+  A   I +E+G+L+ ++G   + + 
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLG 221

Query: 443 YFP 451
            FP
Sbjct: 222 LFP 224


>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
          Length = 1026

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 22/80 (27%), Positives = 40/80 (50%)
 Frame = +2

Query: 260  AVSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
            A   TAV+PI  VK  +Q Q     + A++ YK  +D F ++ + +G +  +RG    ++
Sbjct: 925  ATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982

Query: 440  RYFPTQALNFAFKDKYKQVF 499
               P +A+     D  + +F
Sbjct: 983  GVSPEKAIKLTTNDFVRGIF 1002


>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
          Length = 773

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 14/48 (29%), Positives = 30/48 (62%)
 Frame = +2

Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 493
           +Y G+     +I +++GL  +++GN  N++R  P  A+ FA  +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637


>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
          Length = 95

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 16/55 (29%), Positives = 32/55 (58%)
 Frame = +2

Query: 335 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 499
           I   ++Y G+++AF RI +++G+ +F+RG    +I   P   ++F   +  K+ F
Sbjct: 19  ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73


>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 274

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 20/64 (31%), Positives = 36/64 (56%)
 Frame = +2

Query: 278 VHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 457
           + P+  VK+ LQ+Q  +K+ +    Y+G VD  V++ + +GL   ++GN    +R  P  
Sbjct: 51  IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109

Query: 458 ALNF 469
           A+ F
Sbjct: 110 AVYF 113



 Score = 33.1 bits (72), Expect = 0.22
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +2

Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 469
           RYKG++D  ++  KE+G++ F RG +  ++R F  Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208


>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
          Length = 192

 Score = 36.7 bits (81), Expect = 0.018
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
           Y  + +A  R+ KE+G+L+ WRG     +R     A   A   + KQ+ L
Sbjct: 35  YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84



 Score = 34.7 bits (76), Expect = 0.073
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +2

Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV---FLGG 508
           YKG +D   RI + +G+ + W+G      R  P   L F F ++  +    F GG
Sbjct: 133 YKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVLTFIFLEQLNRAANYFYGG 187


>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 264

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 16/45 (35%), Positives = 29/45 (64%)
 Frame = +2

Query: 362 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
           ++ AF  I + +GLL++++GN A ++R FP  A+ F   + Y +V
Sbjct: 13  VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57



 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 577 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCIS 687
           T+    YPLD  R+RLA  V +  G    +    CIS
Sbjct: 77  TACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS 113


>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
          Length = 577

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 19/53 (35%), Positives = 31/53 (58%)
 Frame = +2

Query: 263 VSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
           ++   V+P   +K  L VQHV+K  A    YKG+  A   I +E+G+L+ ++G
Sbjct: 434 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483


>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 266

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 365 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 490
           +DA ++IP+ +GL S WRG    ++   P   + F   D+ K
Sbjct: 64  IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105


>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 796

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +2

Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
           +P+E  L   W G F++VI  F   A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309


>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 213

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = +2

Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSG 532
           +P+E  +L  W G  ++VI  F   A+N  F+D+YK++    L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSG 184


>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 434

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
 Frame = +2

Query: 239 PGWRYPAA-----VSKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 403
           P WR+ +      V+  + HP+  V+  L VQ +S +  ++  Y GIV A  RI  E+G+
Sbjct: 28  PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85

Query: 404 LSFWRGNFANVIRYFP 451
              ++G   +++   P
Sbjct: 86  RGLYKGLVPSLVSIAP 101


>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 179

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +2

Query: 263 VSKTAVHPIMRVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
           +SK  + P   +K  +QVQ      +     Q+Y G+ D F  I KE+G +  ++G
Sbjct: 42  ISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97


>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 611

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = +2

Query: 281 HPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 460
           +P+  VK   Q    +       +Y G  D   +I    G+ +F +G  A ++R FPT A
Sbjct: 376 YPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435


>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
          Length = 343

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +2

Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSGV 535
           +P+E   L  + G  ++VI  F   A+N  F+++YK+VF     R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313


>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 226

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 304 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 405
           A+ S  RQQ  R RP  +GY +R  R YP+   SP
Sbjct: 83  ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117


>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 706

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 304 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 405
           A+ S  RQQ  R RP  +GY +R  R YP+   SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217


>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 309

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/65 (26%), Positives = 33/65 (50%)
 Frame = +2

Query: 275 AVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 454
           A  P+  +K+ LQ  +  K       +KG +D F++  + +GL   ++G  + ++   P+
Sbjct: 37  AGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPS 95

Query: 455 QALNF 469
            AL F
Sbjct: 96  TALTF 100


>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
          Length = 302

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = +2

Query: 266 SKTAVHPIMRVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 445
           +  AV+P+  +K  LQ+ +  +    +  Y GI+D   +I   +GL +F++G    +I  
Sbjct: 219 ASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVI 275

Query: 446 FP 451
            P
Sbjct: 276 AP 277


>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
          Length = 404

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 304 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 405
           A+ S  RQQ  R RP  +GY +R  R YP+   SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295


>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
          Length = 550

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 304 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 405
           A+ S  RQQ  R RP   GY +R  R YP+   SP
Sbjct: 84  ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118


>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
          Length = 54

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +2

Query: 359 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
           G+V    +     G    +RGN A ++R  P  ++ F   ++YK++
Sbjct: 1   GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46


>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 306

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +2

Query: 305 LLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
           L++++  + +I     YK +  AF +I K++G L  W G
Sbjct: 137 LVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTG 175


>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 632

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 21/56 (37%), Positives = 27/56 (48%)
 Frame = +1

Query: 190 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRTSNHACQAAAPSTARQQADRRRPALQ 357
           RT+ R +  R    R +   V+RRR  DRR      +  A  T R+Q DRRR   Q
Sbjct: 115 RTRARVTSRRQVDRRRTRAQVTRRRQVDRR------RTRARVTRRRQVDRRRTRAQ 164


>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
          Length = 272

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 671 RPENSRWPSPLPTSAARRVRAKSRGYTK 588
           RP +SR  S  P+SA+RR  ++SRG  +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248


>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 166

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -2

Query: 610 RSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 512
           RS+  +R++ RWL R  R+P    S+ R++S SC
Sbjct: 13  RSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46


>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 203

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +2

Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGG 508
           Y+G++     + KE+G+ +F+R     +    P Q L+F   +  ++    LGG
Sbjct: 32  YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGG 85


>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
          Length = 368

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSG 532
           +P+E  +L  + G  ++VI  F   A+N  FK++YK++     T R   G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316


>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
          Length = 406

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 304 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 405
           A+ S  RQQ  R RP  +GY +R  R YP+   +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217


>SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 833

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -3

Query: 552 QITSEVTPELRLLVKPPRNTCLYLSLKA 469
           Q+T  V  E RLL KP R+ C YLS  A
Sbjct: 133 QVTGIVDAEARLL-KPGRSECFYLSFSA 159


>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1277

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 625 QDGYVRSRGGTRSTERWLRRHHRRPDY-QRSNARTASS 515
           QDG V +RG TR +    R H RR  +  R + R +S+
Sbjct: 591 QDGQVTTRGHTRRSSNTTRSHTRRSSHTTRGHTRRSSN 628


>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 866

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +2

Query: 386 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
           P+E  L   W G  ++VI  F    +N  F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853


>SB_34515| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 347

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 122 RDHPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLPGW 247
           RDH   CA  P ST + S+  ++   + P +        PGW
Sbjct: 255 RDHHRVCATLPESTDASSQTDLVLLRIVPCQDVEFVGAPPGW 296


>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2670

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +2

Query: 593  CTPSTSHVPVLP--PMSVREMASVNSP 667
            CTPS+S  P LP  P S  E  S+N+P
Sbjct: 942  CTPSSSTAPPLPTNPKSPSEAPSLNNP 968


>SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11)
          Length = 1704

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +2

Query: 125  DHPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLPGWRYPAAVSKT 274
            +H  A +A   +  +P ++ I +Q            G+PG++YP ++  T
Sbjct: 1210 EHSQAASAQDMTQITPVDEAIAQQRTPAMEPLYQAAGMPGYQYPTSIQYT 1259


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,218,303
Number of Sequences: 59808
Number of extensions: 478978
Number of successful extensions: 1612
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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