Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0010
(744 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19319| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 100 1e-21
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 5e-20
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 83 2e-16
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 79 4e-15
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 9e-15
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 74 1e-13
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 35 0.061
SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 30 2.3
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_9222| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-06) 29 5.3
SB_9865| Best HMM Match : DUF1392 (HMM E-Value=7.4) 28 7.0
SB_19902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_21134| Best HMM Match : PAN (HMM E-Value=0.0002) 28 9.2
SB_13074| Best HMM Match : Fz (HMM E-Value=5.3e-17) 28 9.2
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_19319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 116 bits (278), Expect = 3e-26
Identities = 51/98 (52%), Positives = 68/98 (69%)
Frame = -3
Query: 673 MMQQTVCDECPNVKFVNEERLLEIKVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTE 494
M + +CDECP V +VN+E++LE++VE G + EGEPH+DGEPGDL +
Sbjct: 8 MSPEEICDECPAVTYVNKEKILEVEVEQGMKHEQEYPFVSEGEPHIDGEPGDLKFKIIEL 67
Query: 493 RHPQFTRKADDLYTNVTISLQDALTGFTLELEHLDGHK 380
RH +FTRK DLY NVTI+L DAL+GF +++ HLD HK
Sbjct: 68 RHKRFTRKGKDLYANVTITLNDALSGFEMDIPHLDKHK 105
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 100 bits (239), Expect = 1e-21
Identities = 61/184 (33%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Frame = -3
Query: 727 CNCRQEMVT-RNLGPGRFQMMQQTVCDECPNVKFVNEERL-------------LEIKVEV 590
C R VT + +GPG Q MQ ++C +C +E + ++ V+
Sbjct: 141 CKGRGVKVTIKPIGPGMVQQMQ-SMCHDCSGEDDDGKENIRLAIPNGGDAFNTFQVHVDK 199
Query: 589 GAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQFTRKADDLYTNVTISLQDALTGFT 410
G DG K RGEG+ + EPGD+I++++ + H F+R+ DL+ T++L +AL GF
Sbjct: 200 GMSDGQKITFRGEGDQEPNVEPGDVILVIQQKDHDLFSRQGMDLFMTKTVTLAEALCGFH 259
Query: 409 LELEHLDGHKVSV--SRDKVTWAGARVRKKGEGMPNFENNNLHGNLYVTFDIEFPKQDFT 236
+ ++HLDG + + + G GEGMP + + GNLY+ FDIEFP F
Sbjct: 260 MVVKHLDGRDLLIRYHAGNIIEPGCIRGIVGEGMPAYRHPFDKGNLYIKFDIEFPPNGFL 319
Query: 235 DAEK 224
EK
Sbjct: 320 PEEK 323
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 95.1 bits (226), Expect = 5e-20
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Frame = -3
Query: 712 EMVTRNLGPGRFQMMQQTVCDECPNVKFVNEERLLEIKVEVGAPDGHKSRLRGEGEPHVD 533
+ V R+ G ++ ++ C C K V E ++LE+ ++ G DG K GEG+
Sbjct: 234 QTVCRDCGGKGEKIPEKDRCKNCHGKKVVRERKILEVHIDKGMKDGQKRTFSGEGDQDPG 293
Query: 532 GEPGDLIVILKTERHPQFTRKADDLYTNVTISLQDALTGFTLELEHLDGHKVSVSR--DK 359
EPGD++++L + HP F R+ DL + I L ++L GF + LD + V+
Sbjct: 294 IEPGDIVIVLDEQEHPVFRRRGADLIIQMEIDLVESLCGFQKTITTLDKRTLLVTSKPGN 353
Query: 358 VTWAGARVRKKGEGMPNFENNNLHGNLYVTFDIEFPKQDFTDAEK-EALRKILNQPPNNK 182
V G + EGMP+ N G L + FD++FP+ + + + L K+L PP +
Sbjct: 354 VIKPGDMKSIEDEGMPHHRNPFHKGRLLIQFDVKFPENGVLNPKNMDKLEKLL--PPRPE 411
Query: 181 I 179
I
Sbjct: 412 I 412
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/90 (42%), Positives = 58/90 (64%)
Frame = -3
Query: 490 HPQFTRKADDLYTNVTISLQDALTGFTLELEHLDGHKVSVSRDKVTWAGARVRKKGEGMP 311
H Q + DL ++ ++L++ G +E V V R+K+TW GAR++KKGEGMP
Sbjct: 125 HSQQVPRGSDLTVDLEVTLEELYNGNFIE--------VHVVREKITWPGARIKKKGEGMP 176
Query: 310 NFENNNLHGNLYVTFDIEFPKQDFTDAEKE 221
++ENN+ G+LY+TFD+EFP+ + EKE
Sbjct: 177 SYENNHDRGDLYITFDVEFPRGSLDNQEKE 206
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 79.0 bits (186), Expect = 4e-15
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Frame = -3
Query: 643 PNVKFVNEERLLEIKVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQFTRKAD 464
PN EE++L + V+ G +G K EG+ P D++ +K + H FTR D
Sbjct: 203 PNGSQRLEEKILTVNVKPGWKEGTKITFPKEGDRKPGVIPADVVFKIKDKPHKHFTRDGD 262
Query: 463 D-LYTNVTISLQDALTGFTLELEHLDGHKVSVSRDKVTWAGARVRKKGEGMPNFENNNLH 287
+ L ISL+DAL G T+ + L G V V V G+ R GEG+P ++N+
Sbjct: 263 NNLVYKAKISLRDALGGTTISVPTLSGRTVQVHNADVIQPGSSKRIVGEGLPMPKDNSRK 322
Query: 286 GNLYVTFDIEFPKQDFTDAEKEALRKIL 203
G+L + +D+ P + T A+K+ L L
Sbjct: 323 GDLIIKYDVYLP-NNITPAQKQVLMNTL 349
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 77.8 bits (183), Expect = 9e-15
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Frame = -3
Query: 625 NEERLLEIKVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQFTRKADD--LYT 452
+EE++L + V+ G G + EG+ P D++ +K ++H FTR D+ LYT
Sbjct: 204 SEEKILTVNVKKGWKAGTRITFPKEGDQKPGRIPADIVFTIKDKKHEHFTRDNDNNILYT 263
Query: 451 NVTISLQDALTGF----TLELEHLDGHKVSVSRDKVTWAGARVRKKGEGMPNFENNNLHG 284
V ISL+DALTG+ T+ + LD V+V + + G++ R KGEG+P +
Sbjct: 264 -VKISLRDALTGYSSNITVPVPTLDHRVVNVPLNDIVKPGSKKRIKGEGLPLPKIPGQRM 322
Query: 283 NLYVTFDIEFPKQDFTDAEKEALRKILNQPP 191
++ VTF++ FP + A +ALR IL PP
Sbjct: 323 DMLVTFEVVFPSR-LAPANVDALRNIL--PP 350
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 73.7 bits (173), Expect = 1e-13
Identities = 43/146 (29%), Positives = 82/146 (56%), Gaps = 1/146 (0%)
Frame = -3
Query: 640 NVKFVNEERLLEIKVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQFTRKADD 461
N +++ E+++L+I+V+ G G K EG+ D+I I+ + H F R +++
Sbjct: 132 NNEYIREDKILQIEVKPGWKAGTKITFPREGDMKPGIIASDIIFIIADKPHQFFKRDSEN 191
Query: 460 LYTNVT-ISLQDALTGFTLELEHLDGHKVSVSRDKVTWAGARVRKKGEGMPNFENNNLHG 284
V+ ++L+DAL G +++ +DG +S+ ++V G + R +GEG+P +N
Sbjct: 192 NLIYVSKLTLKDALVGCVIQVPTIDGRVLSIQVNEVIRPGMQKRIQGEGLPLSKNPIERA 251
Query: 283 NLYVTFDIEFPKQDFTDAEKEALRKI 206
+L VTF++EFP + T ++E L +
Sbjct: 252 DLIVTFEVEFP-TNLTGEQREYLASL 276
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 58.0 bits (134), Expect = 8e-09
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = -3
Query: 622 EERLLEIKVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQFTRKADD-LYTNV 446
EE+ L + ++ G G + EG+ +P D++ +K + H FTR D+ L
Sbjct: 202 EEKTLIVNIKPGWKQGTRIVFPREGDRRPGKDPSDIVFKIKDKPHRHFTRDKDNNLIYKA 261
Query: 445 TISLQDALTGFTLELEHLDGHKVSVSRDKVTWAGARVRKKGEGMPNFENNNLHGNLYVTF 266
T+SL+ AL G + + L G + + + G KGEG+P N ++ ++ V F
Sbjct: 262 TVSLRTALGGMNIHVPSLCGEVIDLENKGIIQPGMVRTIKGEGLPIPGNPSVRADMIVEF 321
Query: 265 D 263
D
Sbjct: 322 D 322
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/138 (23%), Positives = 59/138 (42%)
Frame = -3
Query: 661 TVCDECPNVKFVNEERLLEIKVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQ 482
T C +C VNE R + + V G +G R + G++ V +
Sbjct: 253 TPCRKCRGKGRVNESRKITVPVPAGVDNGQTVR--------IPVSFGEVYVTFRVSESKI 304
Query: 481 FTRKADDLYTNVTISLQDALTGFTLELEHLDGHKVSVSRDKVTWAGARVRKKGEGMPNFE 302
F R ++Y++ +IS A+ G + + + G + + T + ++R G G+P +
Sbjct: 305 FERDGINIYSSASISFTQAILGGKIRIPGIQG-DMDLKIPPGTQSHQQMRLTGRGVPRID 363
Query: 301 NNNLHGNLYVTFDIEFPK 248
G+ YV+F + PK
Sbjct: 364 GLG-KGDHYVSFKVHIPK 380
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 610 LEIKVEVGAPDGHKSRLRGEGEPHVDG-EPGDLIVILKTERHPQFTRKADDLYTNVTISL 434
+++K+ G + RL G G P +DG GD V K P++ + L
Sbjct: 338 MDLKIPPGTQSHQQMRLTGRGVPRIDGLGKGDHYVSFKV-HIPKYLNEKQKALILAFAEL 396
Query: 433 QDALTG 416
+D ++G
Sbjct: 397 EDDVSG 402
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 35.1 bits (77), Expect = 0.061
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -3
Query: 619 ERLLEIKVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQFTRKADDLYTNVTI 440
+++L I V+ G K EG+ + P D++ I+K + HP F R D+L T+
Sbjct: 187 DKILTINVKRGWRASTKITFPKEGDQGPNNIPADIVFIVKDKPHPIFKRDNDNLIYIATV 246
Query: 439 SLQDAL 422
L L
Sbjct: 247 PLGKVL 252
>SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 736
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
Frame = -1
Query: 252 PSKTSQML--RKRLCEKY*TSHQIIKYT----MDYSDSKL 151
P + +++L R++ CEKY TSH ++K YSDSK+
Sbjct: 394 PGQLAKLLAVRQKQCEKYPTSHYMLKVAHLQYFSYSDSKI 433
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -3
Query: 622 EERLLEIKVEVGAPDGHKSRLRGEGEPHVDG-EPGDLIVILKTERHPQFTRKADDLYTNV 446
+ERL IKV G R++GE EP V+ + G K + H +F+ KA + +T
Sbjct: 3239 KERLKNIKVVEGDEAQFSVRVKGEPEPKVEWFKTGK-----KIKSHARFSSKAGEKHT-Y 3292
Query: 445 TISLQD 428
T+++ D
Sbjct: 3293 TLTISD 3298
>SB_9222| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-06)
Length = 425
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +1
Query: 298 YFQNLACLLP--SYELLHQPMLPCL*TLTLYDHLNVQVQE*NQSEHPVVKLSHWCISHQL 471
+F N A L+ Y LH L +L D L V V H V+ +HWC+ +L
Sbjct: 47 FFGNAAVLVTVACYRCLHSATYILLVSLATADLL-VSVFSMPWRIHQTVRNNHWCLGMEL 105
Query: 472 C 474
C
Sbjct: 106 C 106
>SB_9865| Best HMM Match : DUF1392 (HMM E-Value=7.4)
Length = 157
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 295 NLHGNL-YVTFDIEFPKQDFTDAEKEALRK 209
N HGNL V D E +D +D+E EAL+K
Sbjct: 16 NSHGNLGLVLQDAEASSEDESDSEDEALKK 45
>SB_19902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 221 LFLSICEVLLGKFYI-KSYIKISMEVVIFKIWHAFSLLTNSCTSPCYLVS 367
L L++C+ L F+I K Y + + V + +++ F+ + C P Y ++
Sbjct: 44 LNLAVCDALTETFWILKQYKVVVLPNVWYWVFNFFAFFNSCCNPPLYCLT 93
>SB_21134| Best HMM Match : PAN (HMM E-Value=0.0002)
Length = 518
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 387 PSKCSSSRVKPVRASCSEIVTLVYKSSALRVNCGC 491
PS S + +K + + + + T+V+ S RV+CGC
Sbjct: 297 PSATSENLIKFLISRDNGVRTVVHNGSCTRVDCGC 331
>SB_13074| Best HMM Match : Fz (HMM E-Value=5.3e-17)
Length = 377
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 500 FEYYNEITWFTIYMGFTFSTQP-RFVSIRSTNFYLNF**PFFIN 628
+EYYN+ W Y F + P ++I + ++N PFF N
Sbjct: 246 YEYYNQERWERSYRAFLMAKNPVNIITIITIISHINQWQPFFRN 289
>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1296
Score = 27.9 bits (59), Expect = 9.2
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +3
Query: 336 TLAPAHVTLSLDTDTL*PSKCSSSRVKPVRASCSEIVTLVYKSSALRVNCGCLSVLSIT 512
T HVT + TDTL + +S + + S+IV+ V ++ V ++ SIT
Sbjct: 464 TATSTHVTTATSTDTLTSTAIVTSVMVTISTGVSQIVSWVTYTTTALVTMTTTAIASIT 522
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,109,613
Number of Sequences: 59808
Number of extensions: 447588
Number of successful extensions: 1088
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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