Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B14
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_23132| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09) 38 0.008
SB_27392| Best HMM Match : Kazal_1 (HMM E-Value=0.00072) 37 0.011
SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_20364| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.8e-16) 33 0.23
SB_59779| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.2e-26) 31 0.53
SB_26577| Best HMM Match : Vicilin_N (HMM E-Value=1.5) 29 2.9
SB_11910| Best HMM Match : Kelch_1 (HMM E-Value=0) 29 2.9
SB_41973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
>SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1080
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +1
Query: 91 IWKWCDLDAHDNDRFVSRHELFPIRAPLMSLEHCIAPFLDQCDADEDHRITLAEWGKC 264
+W++ + DA+ ND+ + HE +++ + E C+ F+D CD D IT EW C
Sbjct: 727 MWEFDNQDANRNDQ-LDEHE---VKSMIDLREPCMVGFMDACDFDGHPGITRHEWNAC 780
>SB_23132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +1
Query: 94 WKWCDLDAHDNDRFVSRHELFPIRAPLMSLEHCIAPFLDQCDADEDHRITLAEWGKC 264
W++ + DA+ ND+ + HE +++ + E C+ F+D CD D IT EW C
Sbjct: 1 WEFDNQDANRNDQ-LDEHE---VKSMIDLREPCMVGFMDACDFDGHPGITRHEWNAC 53
>SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09)
Length = 217
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 88 AIWKW-CDLDAHDNDRFVSRHELFPIRAPLMSLEHCIAPFLDQCDADEDHRITLAEWGKC 264
AI KW D + D D + E+ I A +M E C A FL CD + I+ +EW C
Sbjct: 144 AIAKWEFDRNDLDKDNALEGAEIDNILA-MMIYEPCAAGFLWSCDLNRKQGISRSEWDMC 202
Query: 265 LQLDEYE 285
L E E
Sbjct: 203 FTLAERE 209
>SB_27392| Best HMM Match : Kazal_1 (HMM E-Value=0.00072)
Length = 196
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 LAERRELTPHYLRMEREAESNLTRRWTNA-AIWKWCDLDAHDNDRFVSRHELFPIRAPLM 177
++ RR + +Y E E NL A W++ +D + D +S E+ I PL+
Sbjct: 92 ISRRRLVNRYYQVKESEKGHNLPPDMRKELAQWEFDRVD-FNRDGVLSGREINSIIGPLL 150
Query: 178 SLEHCIAPFLDQCDADEDHRITLAEWGKC 264
E CI F+ CD +++ I EW C
Sbjct: 151 FHERCIYGFVMSCDVNKNSVIDKQEWLLC 179
>SB_58159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +1
Query: 94 WKWCDLDAHDNDRFVSRHELFPIRAPLMSLE-----HCIAPFLDQCDADEDHRITLAEWG 258
WK+ LD++ DR ++ E F + M + C L CD D+D+ ++L EW
Sbjct: 373 WKFHQLDSN-RDRIINSREFFVVSMKKMLGKIKRGRKCSRKLLADCDFDKDNGLSLNEWS 431
Query: 259 KCL 267
CL
Sbjct: 432 YCL 434
>SB_20364| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.8e-16)
Length = 187
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 91 IWKWCDLDAHDNDRFVSRHELFPIRAPLMSLEH---CIAPFLDQCDADEDHRITLAEWGK 261
+WK+ LD + D F+ EL H C F+ CD ++D RI+ EW
Sbjct: 50 MWKFNQLDTNA-DYFLEWSELHGFLRMSKKAIHPKKCSKTFVGYCDENQDQRISRNEWYA 108
Query: 262 CLQLDE 279
C + E
Sbjct: 109 CFGVQE 114
>SB_59779| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1.2e-26)
Length = 452
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 121 DNDRFVSRHELFPIRAPLMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQL 273
D D + EL ++ + E+CI F ++CDA +D + +L E QL
Sbjct: 34 DGDHVLGPEELAEVKE--IPNENCITQFFEKCDATKDGQFSLLESANASQL 82
>SB_26577| Best HMM Match : Vicilin_N (HMM E-Value=1.5)
Length = 649
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 254 GANV-CNSMSTSWRTAATNSSMTCSMVL 334
G+NV CNSMS +W TN +M+ VL
Sbjct: 249 GSNVSCNSMSGAWGKKPTNRTMSTECVL 276
>SB_11910| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 456
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 88 AIWKWCDLDAHDNDRFVSRHELFPIRAPLMSL 183
A+WKW + D H FV+ + +R PLM+L
Sbjct: 70 AVWKWLNHDFHGRSMFVADIMQY-VRFPLMNL 100
>SB_41973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2504
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = -1
Query: 421 LLNSKSKLQSHVIKSEWRYVEPNIIVEFSKHHAT 320
++ + +SH++ + +P I FS+H AT
Sbjct: 1425 IVKHEQNFRSHILPDRYLIAQPTIFTSFSRHQAT 1458
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,939,303
Number of Sequences: 59808
Number of extensions: 269974
Number of successful extensions: 716
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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