Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_A15
(498 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8) 34 0.057
SB_56371| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.099
SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24) 32 0.23
SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3) 32 0.23
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 32 0.30
SB_45915| Best HMM Match : CRAM_rpt (HMM E-Value=9.1e-20) 29 2.8
SB_52197| Best HMM Match : TPR_2 (HMM E-Value=6.6e-10) 28 3.7
SB_980| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 27 8.6
SB_17675| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_1693| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_22| Best HMM Match : Disintegrin (HMM E-Value=0.39) 27 8.6
SB_26379| Best HMM Match : HALZ (HMM E-Value=1.4) 27 8.6
SB_20735| Best HMM Match : HALZ (HMM E-Value=4.6) 27 8.6
>SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8)
Length = 551
Score = 34.3 bits (75), Expect = 0.057
Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Frame = +3
Query: 201 AKNR-DPCRYIRGAWSECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKA------CR 359
++NR + C ++C+++ N +S K + C+T ++ KC + C
Sbjct: 379 SENRSNKCNTGENRSNKCNTREN-RSNKCNTSESRSNKCNTSESRSNKCNTSENRSNKCN 437
Query: 360 YEKSAWSECNANGEMTRTDTLKANSDSSCEPSRRATKKCNKNK 488
++ ++CN + + + N + C S + KCN ++
Sbjct: 438 TSENRSNKCNTSENRSNKCNTRENRSNKCNTSESRSNKCNTSE 480
Score = 33.9 bits (74), Expect = 0.075
Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Frame = +3
Query: 201 AKNR-DPCRYIRGAWSECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKA------CR 359
++NR + C ++C++ N +S K ++ C+T ++ KC + C
Sbjct: 429 SENRSNKCNTSENRSNKCNTSEN-RSNKCNTRENRSNKCNTSESRSNKCNTSESRSNKCN 487
Query: 360 YEKSAWSECNANGEMTRTDTLKANSDSSCEPSRRATKKCNKNK 488
+S ++CN + + + + C S + KCN ++
Sbjct: 488 TSESRSNKCNTSESRSNKCNTSESRSNKCNTSENRSNKCNTSE 530
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 7/100 (7%)
Frame = +3
Query: 201 AKNR-DPCRYIRGAWSECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCK------KACR 359
++NR + C ++C+++ N +S K + C+T + KC C+
Sbjct: 269 SENRSNKCNTRESRSNKCNTREN-RSNKCNTSESRSNKCNTSENRSNKCNTRESRSNKCK 327
Query: 360 YEKSAWSECNANGEMTRTDTLKANSDSSCEPSRRATKKCN 479
++ ++CN + + + N + C + KCN
Sbjct: 328 TRENRSNKCNTSENRSNKCNTRENRSNKCNTRENRSNKCN 367
Score = 32.7 bits (71), Expect = 0.17
Identities = 18/87 (20%), Positives = 36/87 (41%)
Frame = +3
Query: 219 CRYIRGAWSECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKACRYEKSAWSECNANG 398
C ++C++ N +S K ++ C+T ++ KC + +S ++CN +
Sbjct: 376 CNTSENRSNKCNTGEN-RSNKCNTRENRSNKCNTSESRSNKCNTS----ESRSNKCNTSE 430
Query: 399 EMTRTDTLKANSDSSCEPSRRATKKCN 479
+ N + C S + KCN
Sbjct: 431 NRSNKCNTSENRSNKCNTSENRSNKCN 457
Score = 32.3 bits (70), Expect = 0.23
Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Frame = +3
Query: 243 SECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKA------CRYEKSAWSECNANGEM 404
++C++ N +S K ++ C+T + KC + C ++ ++CN
Sbjct: 264 NKCNTSEN-RSNKCNTRESRSNKCNTRENRSNKCNTSESRSNKCNTSENRSNKCNTRESR 322
Query: 405 TRTDTLKANSDSSCEPSRRATKKCN 479
+ + N + C S + KCN
Sbjct: 323 SNKCKTRENRSNKCNTSENRSNKCN 347
Score = 31.9 bits (69), Expect = 0.30
Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Frame = +3
Query: 204 KNR-DPCRYIRGAWSECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCK------KACRY 362
+NR + C ++C+++ + +S K + C+T + KC C
Sbjct: 350 ENRSNKCNTRENRSNKCNTRES-RSNKCNTSENRSNKCNTGENRSNKCNTRENRSNKCNT 408
Query: 363 EKSAWSECNANGEMTRTDTLKANSDSSCEPSRRATKKCNKNK 488
+S ++CN + + N + C S + KCN ++
Sbjct: 409 SESRSNKCNTSESRSNKCNTSENRSNKCNTSENRSNKCNTSE 450
Score = 30.7 bits (66), Expect = 0.70
Identities = 19/99 (19%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Frame = +3
Query: 204 KNR-DPCRYIRGAWSECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKA------CRY 362
+NR + C ++C++ N +S K ++ C T + KC + C
Sbjct: 290 ENRSNKCNTSESRSNKCNTSEN-RSNKCNTRESRSNKCKTRENRSNKCNTSENRSNKCNT 348
Query: 363 EKSAWSECNANGEMTRTDTLKANSDSSCEPSRRATKKCN 479
++ ++CN + + + + C S + KCN
Sbjct: 349 RENRSNKCNTRENRSNKCNTRESRSNKCNTSENRSNKCN 387
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/88 (18%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Frame = +3
Query: 243 SECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCK------KACRYEKSAWSECNANGEM 404
++C++ + +S K + C+T ++ KCK C ++ ++CN
Sbjct: 294 NKCNTSES-RSNKCNTSENRSNKCNTRESRSNKCKTRENRSNKCNTSENRSNKCNTRENR 352
Query: 405 TRTDTLKANSDSSCEPSRRATKKCNKNK 488
+ + N + C + KCN ++
Sbjct: 353 SNKCNTRENRSNKCNTRESRSNKCNTSE 380
>SB_56371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1035
Score = 33.5 bits (73), Expect = 0.099
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 242 PGSPYVTARISIFSTPHATDKNLVFTLLPY 153
P S Y+T +SI P A D+NLV T +PY
Sbjct: 135 PWSEYLTKLVSITGKPLAKDRNLVVTSIPY 164
>SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24)
Length = 429
Score = 32.3 bits (70), Expect = 0.23
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Frame = +3
Query: 222 RYIRGAWSECDSK--TNIKSRKLTLKKGD-PANCDTVKTVQKKC--KKACRYEKSAWSEC 386
R+ GAWSEC S + +++R ++ K D N + K+C + + WS C
Sbjct: 56 RWTAGAWSECSSTCGSGVRTRFVSCKPRDGTCNSEDKPDAYKECDVMECPTWSVGQWSSC 115
Query: 387 NAN-GEMTRTDTLKANSDSSCEPSRRATKK--CN 479
+ G R ++ + C+ R+ + CN
Sbjct: 116 SVTCGVGRRLRSVVCSIHGKCDKQRQPSSSTLCN 149
>SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 532
Score = 32.3 bits (70), Expect = 0.23
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +3
Query: 342 CKKACRYEKSAWSECNANGEMTRTDTLKANSDSSCE----PSRRA-TKKCN 479
C+ C + S WS C G T++ T+ + +SC PS R T++CN
Sbjct: 248 CRVNCNWYWSGWSRCTGCGYSTQSSTVVIRTAASCGGTACPSVRVRTQRCN 298
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 31.9 bits (69), Expect = 0.30
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +3
Query: 198 GAKNRDPCRYIR-GAWSECDSKTNIKSRKLTLKKGDPANC-DTVKTVQ---KKCKKACRY 362
G D CRY AWS C SK + S+ T + P+ C T +T Q KC A +
Sbjct: 663 GGGGGDWCRYWPWSAWSACSSKCSYGSQTRTRQANYPSFCRHTWQTRQCGGPKCDSATQV 722
Query: 363 EKSAWSEC 386
SA EC
Sbjct: 723 CISATGEC 730
>SB_45915| Best HMM Match : CRAM_rpt (HMM E-Value=9.1e-20)
Length = 359
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Frame = +3
Query: 246 ECDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCKKACRYEKS----AWSECNANGEMTRT 413
EC+S +S T + G C++ K ++C+ E + + SEC + E T
Sbjct: 59 ECESTRECES---TRECGSTTKCESTK---EECESTSECESTRECESTSECESTTECEST 112
Query: 414 DTLKANSDSSCEPSRRATKKCNKNKQ 491
++ S+ + +T++C K+
Sbjct: 113 SECESTSECASTTECESTRECESTKE 138
>SB_52197| Best HMM Match : TPR_2 (HMM E-Value=6.6e-10)
Length = 536
Score = 28.3 bits (60), Expect = 3.7
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 240 WSECDSKTNIKSRKLTLKKGDPANCDTVKTVQKK--CKKACRYEKSAWSECNANGEMTRT 413
+S C KT++K R +K ANC+ +++KK KA Y +S ++ G + +
Sbjct: 170 YSSC-LKTSLKIRGDGRRKESEANCNVGLSLEKKGDLHKAAEYFESFYN--LTKGRIWQM 226
Query: 414 DTLKANSDSSCEPSRR 461
D+ + SCE RR
Sbjct: 227 DSGENLHSMSCENLRR 242
>SB_980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 345 KKACRYEKSAWSECNANGEMTRTDTLKANSD 437
K C YE S + GEMT D K N D
Sbjct: 729 KHVCAYEISGMTRGTIGGEMTVNDEYKYNDD 759
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 267 IKSRKLTLKKGDPANCDTVKTVQKKCKKACR 359
IKS+K T+KK + N +++K+CK+ R
Sbjct: 603 IKSQKETMKKLETENSGLAASLEKECKEVER 633
>SB_17675| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 249 CDSKTNIKSRKLTLKKGDPANCDTVKTVQKKCK 347
C+ IK + + DP C K ++K+CK
Sbjct: 121 CEESEGIKIKSAFWGRDDPYVCSDSKPIEKRCK 153
>SB_1693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +3
Query: 264 NIKSR-KLTLKKGDPANCDTVKTVQ-KKCKKACRYEKSAWSECNANGEMTRTDTLKANSD 437
N+KS+ LKK PA T + K+ +K + + + + +GE K + D
Sbjct: 7 NVKSQLPELLKKNLPAPAPTAASAPGKRARKMTKVMEESKKQAEDDGETKDKKRKKTHID 66
Query: 438 SSCEPSRRATKKCNKNKQ 491
E + K KNK+
Sbjct: 67 PLTEKKKNKKKNGEKNKE 84
>SB_22| Best HMM Match : Disintegrin (HMM E-Value=0.39)
Length = 226
Score = 27.1 bits (57), Expect = 8.6
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 219 CRYIRGAWSECDSKTNI---KSRKLTLKKGDPANCDTVKTVQKKCKKACRYEKSAWSECN 389
C I+G+ E + KS L K P CD K+ K + + S C
Sbjct: 17 CDLIKGSTCELTKSSTCDLAKSSTCDLTKSSP--CDLTKSSTCDLTKGSTCDLTKSSTC- 73
Query: 390 ANGEMTRTDTLKANSDSSCEPSRRATKKCNKN 485
++TR T S+C+ +R +T K+
Sbjct: 74 ---DLTRNSTCDLTKSSTCDLTRNSTCDLTKS 102
>SB_26379| Best HMM Match : HALZ (HMM E-Value=1.4)
Length = 421
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +3
Query: 264 NIKSR-KLTLKKGDPANCDTVKTVQ-KKCKKACRYEKSAWSECNANGEMTRTDTLKANSD 437
N+KS+ LKK PA T + K+ +K + + + + +GE K + D
Sbjct: 7 NVKSQLPELLKKNLPAPAPTAASAPGKRARKMTKVMEESKKQAEDDGETKDKKRKKTHID 66
Query: 438 SSCEPSRRATKKCNKNKQ 491
E + K KNK+
Sbjct: 67 PLTEKKKNKKKNGEKNKE 84
>SB_20735| Best HMM Match : HALZ (HMM E-Value=4.6)
Length = 259
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +3
Query: 264 NIKSR-KLTLKKGDPANCDTVKTVQ-KKCKKACRYEKSAWSECNANGEMTRTDTLKANSD 437
N+KS+ LKK PA T + K+ +K + + + + +GE K + D
Sbjct: 26 NVKSQLPELLKKNLPAPAPTAASAPGKRARKMTKVMEESKKQAEDDGETKDKKRKKTHID 85
Query: 438 SSCEPSRRATKKCNKNKQ 491
E + K KNK+
Sbjct: 86 PLTEKKKNKKKNGEKNKE 103
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,161,202
Number of Sequences: 59808
Number of extensions: 239814
Number of successful extensions: 708
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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