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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_B03
         (860 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               53   3e-07
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               50   3e-06
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)         49   6e-06
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               48   7e-06
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)         47   2e-05
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)     47   2e-05
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   3e-05
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)         46   3e-05
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               46   4e-05
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   5e-05
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)              46   5e-05
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   9e-05
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   9e-05
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               44   1e-04
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   4e-04
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)        43   4e-04
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)         43   4e-04
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)        43   4e-04
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)           42   9e-04
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)         41   0.001
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               40   0.003
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               40   0.003
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)         39   0.006
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)               39   0.006
SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.042
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)         36   0.056
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)              35   0.074
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)        35   0.098
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)                 33   0.23 
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)         33   0.30 
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.39 
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               33   0.39 
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.39 
SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26)        32   0.52 
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   0.64 
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)             32   0.69 
SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29)        31   1.6  
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)         31   1.6  
SB_43823| Best HMM Match : MAM (HMM E-Value=0)                         30   2.1  
SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32)        30   2.8  
SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05)         30   2.8  
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)         29   3.7  
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)               29   4.9  
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)        29   4.9  
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_13592| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.5  
SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.5  

>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 716

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
 Frame = +1

Query: 301 GCSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSVSWIKRLDISTPISM 468
           G S   +  ++LW+PD+ L N A ++A    Y  +A+  VS+ G   W+    ++T   +
Sbjct: 133 GISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLNMWLAPTILTTSCKI 192

Query: 469 QLDNWPNDMQTCTFKFGSRMHNSDEMDFVID--KRIYSMFESGAWD 600
            +  +P D Q+CT KFGS  +++  +D        I    ++G WD
Sbjct: 193 NVKYFPFDQQSCTLKFGSWTYDAGSVDIDTSPTASIKGYQQNGEWD 238


>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 422

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
 Frame = +1

Query: 319 VSSERLWRPDVVLLNAAATTAGDYALRARV------SNNGSVSWIKRLDISTPISMQLDN 480
           V    +W+PD++L N A+T     +L  ++      S++GS +W+    I T   + +  
Sbjct: 50  VEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVILSSDGSAAWLSPAIIKTECKVDVRL 109

Query: 481 WPNDMQTCTFKFGSRMHNSDEMDFVIDK 564
           +P D+Q C  KFGS  H+  ++D  + K
Sbjct: 110 FPFDVQYCDLKFGSWTHDGLKIDIQLRK 137


>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
          Length = 240

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
 Frame = +1

Query: 328 ERLWRPDVVLLNAAATT---AGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPN 489
           + +W PD+ LLN    T   AG  ++      V N G   W   +  +   SM L  WP 
Sbjct: 149 KEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVENTGKCVWSGPVTFTFTCSMALSRWPF 208

Query: 490 DMQTCTFKFGSRMHNSDEM 546
           D QTC  KFGS  + S+ M
Sbjct: 209 DQQTCAMKFGSLSYGSNLM 227


>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 541

 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
 Frame = +1

Query: 319 VSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKRLDISTPISMQLDN 480
           ++ +R+W+PDV+L N A+T     +L  ++  N      GS +W+    I +   + +  
Sbjct: 108 IAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAPAIIKSECKIDVRF 167

Query: 481 WPNDMQTCTFKFGSRMHNSDEMD 549
           +P D+Q+C   FGS  H+  ++D
Sbjct: 168 FPFDVQSCELTFGSWTHDGLKID 190


>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
          Length = 479

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
 Frame = +1

Query: 319 VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 486
           VS  ++W PD+VL N A A+T G   ++  R  VS++G   W+  +  S+  ++++  +P
Sbjct: 60  VSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKNMWLAPVIFSSSCTIKIKYFP 119

Query: 487 NDMQTCTFKFGSRMHNSDEMDF---VIDKRIYSMFESGAWDV 603
            D Q C+ KFGS   +   +D         +     +G WD+
Sbjct: 120 FDDQYCSLKFGSWTFDGFHLDLKPEAPQASLSKFIPNGEWDL 161


>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
          Length = 342

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
 Frame = +1

Query: 301 GCSTWLVSSERLWRPDVVLLNAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQL 474
           G     + S+ +W PD+ +LN+A       +  +R  +++ G V W+  L + T   M +
Sbjct: 61  GIKQMTLRSKLIWTPDISVLNSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDI 120

Query: 475 DNWPNDMQTCTFKFGSRMHNSDEMD---FVIDKRIYSMFESGAWDVTDLSS 618
            ++P D Q C  +FGS   +   MD   F     +    E+G W +   +S
Sbjct: 121 AHFPFDNQACELRFGSWSTSLRYMDVHPFEDTANLQYFVENGEWILESTTS 171


>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 705

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
 Frame = +1

Query: 301 GCSTWLVSSERLWRPDVVLLN--AAATTAGDYAL--RARVSNNGSVSWIKRLDISTPISM 468
           G ++  V+   +W+PD+VL +      T   Y    RA + +NG   W    +I +  ++
Sbjct: 82  GLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMHNGYTEWFAPTEIHSICAI 141

Query: 469 QLDNWPNDMQTCTFKFGSRMHNSDEMDFVI--DKRIYSMF-ESGAWDV 603
            +  +P D Q C  KFGS  ++  +++     D    S + +SG WD+
Sbjct: 142 DITYFPFDEQFCKMKFGSWSYSGRQLNLTSKGDSADLSKYTKSGEWDL 189


>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
          Length = 384

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 25/113 (22%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
 Frame = +1

Query: 301 GCSTWLVSSERLWRPDVVLL-NAAATTAG--DYA-LRARVSNNGSVSWIKRLDISTPISM 468
           G    ++ +  +W+PD++L  N      G  D+   R R++++G   W     + T  ++
Sbjct: 16  GVKEVVLQARDVWQPDIILYQNIIQDFDGRLDHTNTRVRITSSGMTYWSMPFVVVTLCTI 75

Query: 469 QLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDVTDLS 615
            + ++P D Q C   FGS  H+ +E++ + D++      +  ++G W + +++
Sbjct: 76  NVSDFPFDTQQCKLTFGSWQHDGNEINLINDRKQALLAKTRVKNGEWQIQNIT 128


>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 506

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
 Frame = +1

Query: 301 GCSTWLVSSERLWRPDVVLLNAAATTAGD----YALRARVSNNGSVSWIKRLDISTPISM 468
           G  T  + ++ +W PD+VL ++A +        Y     +S +GS +W       +   +
Sbjct: 63  GVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISKDGSSAWFSPASFRSTCKI 122

Query: 469 QLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDK---RIYSMFESGAWDVTDLSSAVXSQ 633
            +  +P D QTC  KFGS  +   ++D        +     +S  WD+   +++  SQ
Sbjct: 123 DVTYFPFDEQTCYMKFGSWTYTIADVDIQASPAPVKSSKYLKSAEWDLMSATTSRKSQ 180


>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
 Frame = +1

Query: 328 ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPND 492
           +++W+PD  L N     AG  D +L     RV  NG+V++  R+  +    M+  N+P D
Sbjct: 135 DKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKMEFRNFPMD 194

Query: 493 MQTCTFKFGSRMHNSDEMDFVI-DKRIYSMFESGAWDVTDLSSAV 624
            Q+C     S     DE+ ++  D RIY   E   +DV  L   V
Sbjct: 195 RQSCPVTISSYFFPEDEIYYIWGDLRIYK-GELAQFDVLGLKKDV 238


>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 724

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
 Frame = +1

Query: 289 QGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR----ARVSNNGSVSWIKRLDI 450
           Q ++G    +V  ER  +W PDVVLLN A  ++    +       V +NG V W+  + +
Sbjct: 52  QSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNEGNPVLVESNGVVRWLAPVVL 111

Query: 451 STPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF-VIDKRIYSMF-ESGAWDV 603
            +   M + ++P D Q C  KF S   +  E+    +D  +   + ES  WD+
Sbjct: 112 KSRCKMDVRSYPFDEQYCGLKFASWTGSQSELRLDAMDNDVRQNYSESSEWDL 164


>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 312

 Score = 44.8 bits (101), Expect = 9e-05
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
 Frame = +1

Query: 331 RLWRPDVVLLNAA-ATTAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 498
           R+WRPD++L N A   T G    +  + ++  +GS  W+  +   +     +  +P D Q
Sbjct: 103 RVWRPDLILYNNADRDTDGALDRFYTKVQLKFDGSSLWLAPIIFKSTCKFDVAYFPFDEQ 162

Query: 499 TCTFKFGSRMHNSDEMDFV----IDKRIYSMFESGAWDVTDLSS 618
           +C  KFGS  ++   ++ V     D  I     +G W++T +S+
Sbjct: 163 SCILKFGSWTYDGLRLNIVPENGTDIGIDKFVSNGEWELTGVSA 206


>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 686

 Score = 44.8 bits (101), Expect = 9e-05
 Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = +1

Query: 301 GCSTWLVSSERLWRPDVVLLNAA-ATTAGD---YALRARVSNNGSVSWIKRLDISTPISM 468
           G  +  V    +W PD+VL N   + ++G+   +  +  + ++G+V W+  + + +   +
Sbjct: 233 GMKSIKVDPSCVWVPDIVLYNNVDSDSSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKI 292

Query: 469 QLDNWPNDMQTCTFKFGSRMHNSDE 543
            + N+P D Q C  +FGS  ++  E
Sbjct: 293 DITNFPLDEQFCKLEFGSWAYDGFE 317


>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 275

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
 Frame = +1

Query: 334 LWRPDVVLLNAAAT----TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 501
           LW+PD+ L N A +    +   +  + +V+ +G+ +W+     +T   + +  +P D Q 
Sbjct: 73  LWKPDIYLYNNADSGYDGSLYGFTAKIKVNYSGTNTWLAPKIFTTSCKINVKYFPFDQQE 132

Query: 502 CTFKFGSRMHNSDEMDFVIDK---RIYSMFESGAWD 600
           C  KFGS  ++++ +D   ++    I    ++G WD
Sbjct: 133 CRLKFGSWTYDANSVDIFPEEDQASIKGYQKNGEWD 168


>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 648

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
 Frame = +1

Query: 322 SSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNW 483
           S + +W PDV L+N        AG   L      V  +G V WI +   ++  ++++  W
Sbjct: 424 SPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGKVDWIAQASFTSTCNLRVRFW 483

Query: 484 PNDMQTCTFKFGSRMHNSDEMDFVIDKR--IYSMFESGAWDVTDLS 615
           P D Q CT  F S  +   E+   +D          +  WD+ +++
Sbjct: 484 PMDDQFCTLTFSSWTYTESEIALKMDNSGLTTGHLSNNEWDILNIT 529


>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
          Length = 319

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = +1

Query: 406 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF--VIDKRIYS- 576
           V+N G V W       +  S+++  WP D+Q C+  FGS +  +  ++   + D   Y+ 
Sbjct: 21  VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTD 80

Query: 577 -MFESGAWDVTDLS 615
              +SG WD+ ++S
Sbjct: 81  RFMQSGDWDIKEVS 94


>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
          Length = 147

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 8/107 (7%)
 Frame = +1

Query: 322 SSERLWRPDVVLLNAAATT---AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNW 483
           S + +W PDV L+N A  +   AG    +     V   G V W+     ++   +++  W
Sbjct: 23  SPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGGKVEWVAPASFTSDCKLRVRYW 82

Query: 484 PNDMQTCTFKFGSRMHNSDEMDFVID--KRIYSMFESGAWDVTDLSS 618
           P D Q CT  F S  ++  E+    D  +       +  WD+ ++++
Sbjct: 83  PIDDQFCTLTFSSWTYDDQEIIIETDDSELTRDHLHNSQWDIINITA 129


>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
          Length = 400

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = +1

Query: 406 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF--VIDKRIYS- 576
           V+N G V W       +  S+++  WP D+Q C+  FGS +  +  ++   + D   Y+ 
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTD 161

Query: 577 -MFESGAWDVTDLS 615
              +SG WD+ ++S
Sbjct: 162 RFMQSGDWDIKEVS 175


>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
          Length = 91

 Score = 41.5 bits (93), Expect = 9e-04
 Identities = 17/65 (26%), Positives = 33/65 (50%)
 Frame = +1

Query: 328 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 507
           +++W+PD  + N  ++T  +      +   G V + +R+ +     M L N+P D Q+C+
Sbjct: 26  KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85

Query: 508 FKFGS 522
             F S
Sbjct: 86  ISFES 90


>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
          Length = 445

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 12/99 (12%)
 Frame = +1

Query: 301 GCSTWLVSSERLWRPDVVLLNAA----ATTAGD--------YALRARVSNNGSVSWIKRL 444
           G S   VS +R W PD++L N+     +    D        Y  +  + +NG  SW+   
Sbjct: 39  GVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGGGTEKYKTQIEIRSNGYNSWLSPA 98

Query: 445 DISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID 561
              +   +    +P D Q CT +FGS   ++ ++D  ID
Sbjct: 99  MFKSTCDVNTRYFPFDDQHCTLEFGSWAFDASQLDLQID 137


>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 434

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
 Frame = +1

Query: 334 LWRPDVVLLNAA--ATTAGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 501
           LW+PD+VL N          Y    +V   + G + W     + T   + +  +P D QT
Sbjct: 116 LWKPDMVLYNNVNDEDRGEQYLFNTKVIIYSTGDIEWYSPNILKTHCKIDIQYFPFDTQT 175

Query: 502 CTFKFGSRMHNSDEMD 549
           C   FGS  +N  ++D
Sbjct: 176 CKLTFGSWTYNGLKID 191


>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 548

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
 Frame = +1

Query: 331 RLWRPDVVLLNAAATT-AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 498
           ++W PD++L N A  T AG    Y      S++G+  W      ++  ++ +  +P D Q
Sbjct: 153 KVWIPDIILYNNADETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQ 212

Query: 499 TCTFKFGS 522
            C+ KFGS
Sbjct: 213 NCSLKFGS 220


>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
          Length = 134

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 388 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID-- 561
           +  + +VS+ G   W+    ++T   + +  +P D Q+CT KFGS  +++  +D      
Sbjct: 13  FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVDIDTSPT 72

Query: 562 KRIYSMFESGAWD 600
             I    ++G WD
Sbjct: 73  ASIKGYQQNGEWD 85


>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 364

 Score = 38.7 bits (86), Expect = 0.006
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = +1

Query: 331 RLWRPDVVLLNA--AATTAGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQ 498
           ++WRPD    NA  ++ TA D  + + ++   NG V + +   I+    M+L ++P D Q
Sbjct: 34  KMWRPDPFCYNARESSLTASDDDINSMMTIHPNGDVVYSRMTIITAECEMKLHDFPMDEQ 93

Query: 499 TCTFKFGSRMHNS 537
            C  K GS  +++
Sbjct: 94  QCHLKLGSYSYST 106


>SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 142

 Score = 35.9 bits (79), Expect = 0.042
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +1

Query: 415 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDK---RIYSMFE 585
           NG   W+  + +++   + +  +P D Q C+ KFGS  ++ + +D V +     +     
Sbjct: 22  NGINIWLAPVLLTSSCKIDVTYFPFDEQHCSLKFGSWTYDGERLDLVSESPSGDVSKYVP 81

Query: 586 SGAWDVTDLSS 618
           SG WD+   ++
Sbjct: 82  SGQWDLVSFTA 92


>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
          Length = 636

 Score = 35.5 bits (78), Expect = 0.056
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
 Frame = +1

Query: 322 SSERLWRPDVVLLNAAATTA----GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 489
           ++   W+PD    NA  +       D   R  +  +G + + + + I     M L ++P 
Sbjct: 292 AASNAWKPDPYCYNARQSNMMLEDKDVNSRLSIDPDGKIFYSRGVSIVASCEMDLHDFPL 351

Query: 490 DMQTCTFKFGSRMHNSDEMDF 552
           D Q C  KFGS      ++ F
Sbjct: 352 DTQNCYLKFGSYAFTDTDIFF 372


>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 194

 Score = 35.1 bits (77), Expect = 0.074
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +1

Query: 361 NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSD 540
           N  A T   +  + ++ N+G   W     I +  ++ +  +P D Q C  KFGS  +N  
Sbjct: 5   NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYNGL 64

Query: 541 EMDFV 555
           E++ V
Sbjct: 65  EVNIV 69


>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
          Length = 269

 Score = 34.7 bits (76), Expect = 0.098
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 397 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 552
           +A V +NG   W    +I +   + +  +P D Q C  KFGS  +   +++F
Sbjct: 21  KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGSWTYTGRQLNF 72


>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 930

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
 Frame = +1

Query: 334 LWRPDVVLLNAAA----TTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 501
           +W P V++ N A     +       R  V ++G+V W+    I +   + +  +P D Q 
Sbjct: 576 IWTPPVIIYNQAGDLGESITSSNTPRPVVRSDGTVLWMVPTVIKSSCVIDVKYFPFDQQL 635

Query: 502 CTFKFGSRMHNSDEMD 549
           C   FGS  ++  ++D
Sbjct: 636 CKIIFGSWHYDVSKLD 651


>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
          Length = 592

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = +1

Query: 412 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMH-----NSDEMDFVIDKRIYS 576
           +NG+  W     + +   +++  +P D QTC  KFGS  H     +   M+     R Y 
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSHDITTLDMSPMNLTFPTRYYQ 266

Query: 577 MFESGAWDVTDL 612
             ++G W + D+
Sbjct: 267 --KNGEWSIYDI 276


>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 127

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = +1

Query: 334 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 501
           LW PD    NA  +   + D  + + ++   +GS+ + +   I     M L ++P D QT
Sbjct: 17  LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76

Query: 502 CTFKFGSRMHNSDEM 546
           C   FGS  +  +++
Sbjct: 77  CNLVFGSYGYTDNDI 91


>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 480

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 18/73 (24%), Positives = 30/73 (41%)
 Frame = +1

Query: 334 LWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 513
           +W PD    NA           + +  NG + +  R  +     M L N+P D+Q C+  
Sbjct: 151 IWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQMDLFNFPLDVQRCSLV 210

Query: 514 FGSRMHNSDEMDF 552
             S  +   ++DF
Sbjct: 211 LESFAYTGRQIDF 223


>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 346

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = +1

Query: 334 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 501
           LW PD    NA  +   + D  + + ++   +GS+ + +   I     M L ++P D QT
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203

Query: 502 CTFKFGSRMHNSDEM 546
           C   FGS  +  +++
Sbjct: 204 CNLVFGSYGYTDNDI 218


>SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26)
          Length = 360

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 13/60 (21%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = +1

Query: 448 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESGAWDVTDLS 615
           + T  ++ + ++P D Q C   FGS  H+ +E++ + D++      +  ++G W + +++
Sbjct: 5   VVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRKQALLAKTRVKNGEWQIQNIT 64


>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1758

 Score = 28.3 bits (60), Expect(2) = 0.64
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
 Frame = +1

Query: 481  WPNDMQTCTFKFGSRMHNSDEMDFVI-----DKRIYSMFESGAWDV 603
            +P D Q C  KFGS  H+S  +D        +K IY+  E G W +
Sbjct: 1509 FPFDEQKCLLKFGSWTHDSSRLDMRTQTNGSNKDIYT--EHGEWQL 1552



 Score = 22.2 bits (45), Expect(2) = 0.64
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 319  VSSERLWRPDVVLLN 363
            V+ E +W PD+V+ N
Sbjct: 1492 VAPEEVWVPDIVIYN 1506


>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
          Length = 75

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +1

Query: 406 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 549
           + + G + W     + T   + +  +P D QTC   FGS  +N  ++D
Sbjct: 19  IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 66


>SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29)
          Length = 355

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
 Frame = +1

Query: 454 TPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSM----FESGAWDV 603
           T   + + ++P D Q C   FG+  ++ +E++ + +KR+ ++     E+G W V
Sbjct: 7   TMCKIDVTDFPFDSQRCPITFGAWQYDQNEVNLINNKRLATVASTRVENGEWTV 60


>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
          Length = 301

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 403 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 513
           R+  NG++ +  RL +++   M L N+P D Q C  K
Sbjct: 64  RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100


>SB_43823| Best HMM Match : MAM (HMM E-Value=0)
          Length = 1724

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 24   CRRLILFCYQFLLTCAIASAAECENATSL 110
            C +L + C   L+ CA+    +CEN+TS+
Sbjct: 1537 CSKLNITCPAGLIPCAVGDNGQCENSTSV 1565


>SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32)
          Length = 363

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/69 (21%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +1

Query: 406 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSMFE 585
           + ++G+ SW    +I +   + +  +P D Q+C   FGS  +  + ++ V  +    + +
Sbjct: 10  IDSDGTNSWYAPTEIKSICQIDITYFPFDAQSCPIIFGSWTYTGNYLNLVNARNQSDLSK 69

Query: 586 ---SGAWDV 603
              SG W++
Sbjct: 70  YTISGEWEL 78


>SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05)
          Length = 109

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = +1

Query: 412 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR---IYSMF 582
           N G++ W     + +   + +  +P D Q C+  FGS  + S+ +   I ++   +    
Sbjct: 12  NTGAIEWYAPTLVKSICKIDITYFPFDKQNCSLVFGSWTYTSEFLSLDIKQKEPDLSKYT 71

Query: 583 ESGAWDV 603
            +G W++
Sbjct: 72  PNGQWEM 78


>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
          Length = 296

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
 Frame = +1

Query: 328 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 498
           + +W P     NA      D         +  NG V +  RL I+    + L  +P+D+Q
Sbjct: 32  DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91

Query: 499 TC 504
            C
Sbjct: 92  VC 93


>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
          Length = 360

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 310 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 420
           TWL+    +WRPD+VL +A      D  L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306


>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
          Length = 517

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +1

Query: 334 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 504
           +W PD V ++A+     +  +   +  V+  G V W  R  +     M L  +P D QTC
Sbjct: 38  VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97


>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1516

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -1

Query: 218 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 114
           L+++S    +G VD  FGV  +   +R  +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628


>SB_13592| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 195

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/68 (22%), Positives = 33/68 (48%)
 Frame = -2

Query: 208 LACLKCRVRLTTILESGGDSRSYVARSESIMRDSDVAFSHSAALAIAQVRRNW*QNNISR 29
           + C KC ++    L+ GG + S  A + ++     +  S+  +LA+   RR+W    +++
Sbjct: 62  VTCHKCNLKTIEFLQPGGSTSSRAA-ATAVELQFALYESYYNSLAVVLQRRDWENPGVTQ 120

Query: 28  RHFMTTDP 5
            + +   P
Sbjct: 121 LNRLAAHP 128


>SB_18296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 865

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 388 SPRRWLQPRLAVPRQASTSVPRTPAKCCSPIXPA 287
           SPR+ L    + P+ A TS  RTP     P+ PA
Sbjct: 629 SPRQTLSAPPSRPKTAPTSAQRTPEPIRKPLVPA 662


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,500,967
Number of Sequences: 59808
Number of extensions: 615375
Number of successful extensions: 1638
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1619
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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