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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A06
         (936 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               46   3e-05
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)     45   8e-05
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)         44   2e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)           43   3e-04
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   0.001
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               42   0.001
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)              41   0.001
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)         40   0.004
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               39   0.005
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)             38   0.012
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               38   0.012
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)           38   0.015
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)           38   0.015
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)                 36   0.047
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)              36   0.062
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               33   0.25 
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)         33   0.33 
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               32   0.58 
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)               32   0.77 
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)         32   0.77 
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.77 
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)             31   1.3  
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)             30   2.3  
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.1  
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)               29   5.4  
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.4  
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)         29   5.4  
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)         29   5.4  
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.4  
SB_25189| Best HMM Match : Drf_FH1 (HMM E-Value=4.1)                   29   7.1  
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)         28   9.4  

>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 541

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
 Frame = +1

Query: 319 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 483
           ++  LL  Y +++ P    +  + + L + LR   ++ E +  + I   ++  W D  L 
Sbjct: 35  LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94

Query: 484 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWI 636
           WN  ++G   +  ++ +R+W+PDV+L N A+T     +L  ++  N      GS +W+
Sbjct: 95  WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWL 152



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
 Frame = +1

Query: 319 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 483
           +++ L   Y +++ P    D  + + L + LR   ++ E E  +     ++  W D  L 
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512

Query: 484 WNAGEW-GCSTWLVSSERLWRPDVVLLN 564
           WN  ++ G  + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540


>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
          Length = 342

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
 Frame = +1

Query: 385 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL 561
           LTL+  H    ++E  ++    L+  W D RL+WN  E+ G     + S+ +W PD+ +L
Sbjct: 22  LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80

Query: 562 NAAATTAG--DYALRARVSNNGSVSWIKRLDIST 657
           N+A       +  +R  +++ G V W+  L + T
Sbjct: 81  NSANKDMDLREKNIRLFINSAGEVLWMNPLILHT 114


>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
          Length = 373

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
 Frame = +1

Query: 331 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 495
           L  TY+++  P    D  + V L L L    ++ +   T+ ++  ++  W D RL WN  
Sbjct: 20  LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79

Query: 496 EW-GCSTWLVSSERLWRPDVVLLNAA 570
            + G    ++ + RLW PD+ L N A
Sbjct: 80  AYDGVDNIVIKASRLWLPDITLYNNA 105


>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
          Length = 478

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = +1

Query: 457 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 570
           + W++  LSWNA E+G  +T  V  +RLW PD+VL N A
Sbjct: 77  VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115


>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 686

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
 Frame = +1

Query: 403 HANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NAAAT 576
           H  +  +  TV     L   W D  L+WN  ++ G  +  V    +W PD+VL  N  + 
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258

Query: 577 TAGD---YALRARVSNNGSVSWIKRLDIST 657
           ++G+   +  +  + ++G+V W+  + + +
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKS 288


>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 716

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
 Frame = +1

Query: 463 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRA--RVSNNGSV 627
           W +  LSWNA E+G  S   +  ++LW+PD+ L N A ++A    Y  +A  +VS+ G  
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178

Query: 628 SWIKRLDIST 657
            W+    ++T
Sbjct: 179 MWLAPTILTT 188


>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 724

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
 Frame = +1

Query: 430 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 600
           T+R+    ++ W D +L W+  ++G    +V  ER  +W PDVVLLN A  ++    +  
Sbjct: 32  TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91

Query: 601 ---ARVSNNGSVSWI 636
                V +NG V W+
Sbjct: 92  GNPVLVESNGVVRWL 106


>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
          Length = 445

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
 Frame = +1

Query: 436 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNA 567
           +++  + + W +  LSWNA E+ G S   VS +R W PD++L N+
Sbjct: 16  KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNS 60


>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 422

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
 Frame = +1

Query: 451 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 609
           +++ W D  L+WN  ++G   +  V    +W+PD++L N A+T     +L  ++      
Sbjct: 26  IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85

Query: 610 SNNGSVSWIKRLDIST 657
           S++GS +W+    I T
Sbjct: 86  SSDGSAAWLSPAIIKT 101


>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
          Length = 79

 Score = 37.9 bits (84), Expect = 0.012
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +1

Query: 430 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 564
           T+R+    ++ W D +L W+  ++G    +V  ER  +W PDVVLLN
Sbjct: 32  TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78


>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 548

 Score = 37.9 bits (84), Expect = 0.012
 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
 Frame = +1

Query: 394 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NA 567
           HLR     +    V +   ++  W +  L+WN  ++ G  +  ++  ++W PD++L  NA
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165

Query: 568 AATTAG---DYALRARVSNNGSVSW 633
             T AG    Y      S++G+  W
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEW 190


>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
          Length = 123

 Score = 37.5 bits (83), Expect = 0.015
 Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
 Frame = +1

Query: 295 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 459
           ++   L L+ D     Y++   P  D  + V +   + +  + +     ++L     ++M
Sbjct: 27  QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86

Query: 460 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 564
           NW +  L WNA E+G    L +S   +W PD+VL N
Sbjct: 87  NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122


>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
          Length = 362

 Score = 37.5 bits (83), Expect = 0.015
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +1

Query: 451 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 618
           + + W D RL WN  ++G   +++  S +LW PD+ L N A        +      V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335

Query: 619 GSVSW 633
           GS+ W
Sbjct: 336 GSIGW 340


>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 930

 Score = 35.9 bits (79), Expect = 0.047
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
 Frame = +1

Query: 451 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSN 615
           L+M W D  L WN  ++G  T + + +  +W P V++ N A     +       R  V +
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606

Query: 616 NGSVSWI 636
           +G+V W+
Sbjct: 607 DGTVLWM 613


>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 705

 Score = 35.5 bits (78), Expect = 0.062
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
 Frame = +1

Query: 451 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSN 615
           + + W++  L+W+   +G  T + V+   +W+PD+VL +      T   Y    RA + +
Sbjct: 64  INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123

Query: 616 NGSVSWIKRLDI 651
           NG   W    +I
Sbjct: 124 NGYTEWFAPTEI 135


>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 506

 Score = 33.5 bits (73), Expect = 0.25
 Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = +1

Query: 433 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG----DYAL 597
           + I+  + + W ++ L+W+   + G  T  + ++ +W PD+VL ++A +        Y  
Sbjct: 39  MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98

Query: 598 RARVSNNGSVSW 633
              +S +GS +W
Sbjct: 99  HVIISKDGSSAW 110


>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
          Length = 479

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
 Frame = +1

Query: 463 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAG---DYALRARVSNNGSV 627
           W +  L WN   +G    + VS  ++W PD+VL  NA A+T G   ++  R  VS++G  
Sbjct: 40  WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99

Query: 628 SWI 636
            W+
Sbjct: 100 MWL 102


>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 275

 Score = 32.3 bits (70), Expect = 0.58
 Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
 Frame = +1

Query: 451 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 615
           + + W +  ++WN  E+G    + +    LW+PD+ L N A +    +   +  + +V+ 
Sbjct: 44  MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103

Query: 616 NGSVSWI 636
           +G+ +W+
Sbjct: 104 SGTNTWL 110


>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
          Length = 434

 Score = 31.9 bits (69), Expect = 0.77
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
 Frame = +1

Query: 250 LSAQFVLAIASAAECENATSL---SLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE 420
           +SA+F +A+    + +   SL   S  + + L T    SPP   ++ +  L     ++  
Sbjct: 22  VSAKFGIALKEVLDMDAIPSLIHPSYDVITSLCTLTMTSPPP--LLASSRLAFPGYDVIS 79

Query: 421 SESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 564
             + V +    +  W D  L W+  + G  T + V    LW+PD+VL N
Sbjct: 80  GPNMVLLC---RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYN 125


>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
          Length = 191

 Score = 31.9 bits (69), Expect = 0.77
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = +1

Query: 370 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 546
           K +V   LH + A +  S S VR+   +++ W +  L WN  ++G   T  V+   +W P
Sbjct: 69  KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126

Query: 547 DVVLLN 564
           D+VL N
Sbjct: 127 DIVLYN 132


>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 312

 Score = 31.9 bits (69), Expect = 0.77
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 451 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 570
           + + W +  L+W+   +G  T + V   R+WRPD++L N A
Sbjct: 75  IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNA 115


>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
          Length = 88

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
 Frame = +1

Query: 319 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 492
           +++ LL  YDR   P  +    V +TL L          T+  + D+   W +  L+WN 
Sbjct: 15  LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62

Query: 493 GEWG-CSTWLVSSERLWRPDVVL 558
            E+G   T  VS   +W PD+VL
Sbjct: 63  TEYGGLKTINVSPTIIWLPDIVL 85


>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
          Length = 156

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +1

Query: 463 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 564
           W ++ L+W+  E+G  ST  V+ +++W PD+ L N
Sbjct: 2   WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36


>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 648

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
 Frame = +1

Query: 463 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN---AAATTAGDYAL---RARVSNNGS 624
           W D  L W+  ++       S + +W PDV L+N        AG   L      V  +G 
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463

Query: 625 VSWIKRLDIST 657
           V WI +   ++
Sbjct: 464 VDWIAQASFTS 474


>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
          Length = 360

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 511 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 621
           TWL+    +WRPD+VL +A      D  L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306


>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 137

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = +1

Query: 343 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 507
           YD+   P  D+   V L + +   N   I E    V +   ++ NW D RL+ N  +   
Sbjct: 14  YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72

Query: 508 STWLVSSERLWRPDVVLLNAAA 573
           +      E++WRPD    NA A
Sbjct: 73  TFTRGDIEKVWRPDTYCSNAHA 94


>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
          Length = 137

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
 Frame = +1

Query: 343 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 507
           YD+   P  D+   V L + +   N   I E    V +   ++ NW D RL+ N  +   
Sbjct: 14  YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72

Query: 508 STWLVSSERLWRPDVVLLNAAA 573
           +      E++WRPD    NA A
Sbjct: 73  TFTRGDIEKVWRPDTYCSNAHA 94


>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
          Length = 428

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
 Frame = +1

Query: 451 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 564
           +   W D  L WN     G     V    +W PD+ L+N
Sbjct: 28  IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66


>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1516

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -1

Query: 420 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 316
           L+++S    +G VD  FGV  +   +R  +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628


>SB_25189| Best HMM Match : Drf_FH1 (HMM E-Value=4.1)
          Length = 570

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 179 VFIQYFRNHTMYLLHERILCIRLCYQ 256
           V +QY RNH  YLLH+   C+ L Y+
Sbjct: 244 VALQY-RNHCHYLLHKLCYCVALQYR 268


>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1758

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 442  LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 564
            + DLQ  W +  L+W+  ++G    + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506


>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
          Length = 229

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
 Frame = +1

Query: 298 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 465
           NA +LS+ I+  LA+YDR+  P+   + V + +  +  +  E  E+ +    D  L+  W
Sbjct: 15  NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74

Query: 466 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 564
            D R   N  E   +     ++  W PD    N
Sbjct: 75  YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWN 106


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,828,029
Number of Sequences: 59808
Number of extensions: 576951
Number of successful extensions: 1447
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2729039029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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