Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40021
         (381 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    26   0.54 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   6.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   6.6  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   6.6  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 165  FEILVGIERAWKKEVFSGPRPVLWAGMTTDMGQWHQDELE 284
            ++ ++G      K    G  P+ W G  T  G+W +DE +
Sbjct: 1780 YQEVLGAVPNTNKHSMKGSNPI-WIGSGTPEGEWAKDEFD 1818


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 244 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHI 131
           +PA  T      TS   A S PT+     +  I+ +HI
Sbjct: 39  VPACTTTTSTTSTSGASAASSPTRDEMSVVVPISPLHI 76


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -3

Query: 244 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHI 131
           +PA  T      TS   A S PT+     +  I+ +HI
Sbjct: 39  VPACTTTTSTTSTSGASAASSPTRDEMSVVVPISPLHI 76


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 372 PHIKGNVGFVFTRGD 328
           P +KGNVG+   +GD
Sbjct: 734 PGLKGNVGYSGDKGD 748


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,847
Number of Sequences: 2352
Number of extensions: 8111
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)