Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10416
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   4.5  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   4.5  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.9  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   5.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.8  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   7.8  

>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 16/72 (22%), Positives = 25/72 (34%)
 Frame = -3

Query: 718 TGTNKWSCKFSPTGKSALTSMFRSSKCLRGPIPESNNSCGELIAPAETTTSFLTFTAISR 539
           T T  WS +  P   +  T     +     P P +  +  +L  P  TTT+ +     + 
Sbjct: 169 TTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDPTAT 228

Query: 538 PPLFNKTPLTCW 503
                 T  T W
Sbjct: 229 TTTHAPTTTTTW 240


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 16/72 (22%), Positives = 25/72 (34%)
 Frame = -3

Query: 718 TGTNKWSCKFSPTGKSALTSMFRSSKCLRGPIPESNNSCGELIAPAETTTSFLTFTAISR 539
           T T  WS +  P   +  T     +     P P +  +  +L  P  TTT+ +     + 
Sbjct: 169 TTTTTWSDQPPPPTTTTTTVWTDPTATTTTPAPTTTTTWSDLPPPPPTTTTTVWIDPTAT 228

Query: 538 PPLFNKTPLTCW 503
                 T  T W
Sbjct: 229 TTTHAPTTTTTW 240


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 343 NGDSQIGVMKSFTTTKGGTRFSTARAFLSPIKDRKNLHVIKNAIATKI-VFKPGTNKSVE 519
           N D Q G  +S TT     R+S++      + D  N   + N  AT I V+KP +  SV+
Sbjct: 4   NTDDQYGDAESKTTISSSRRYSSSSYQDQSMDDALNT-TLTNDKATLIQVWKPKSYGSVK 62


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +1

Query: 343 NGDSQIGVMKSFTTTKGGTRFSTARAFLSPIKDRKNLHVIKNAIATKI-VFKPGTNKSVE 519
           N D Q G  +S TT     R+S++      + D  N   + N  AT I V+KP +  SV+
Sbjct: 4   NTDDQYGDAESKTTISSSRRYSSSSYQDQSMDDALNT-TLTNDKATLIQVWKPKSYGSVK 62


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 289 DLIIKAAVELGLKNLTDCNGDSQIGVMKSFTTTKGGTRFS 408
           +L+  A  ELG  ++TD +G +    +  F T  G   ++
Sbjct: 268 ELLAVAGTELGSPHMTDIHGATVYNNLLKFYTESGNLLYT 307


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = +2

Query: 599 PTAVVALRNWTS-QALG 646
           PTAV  LR WTS +A+G
Sbjct: 133 PTAVQDLRKWTSTEAIG 149


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 11/17 (64%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = +2

Query: 599 PTAVVALRNWTS-QALG 646
           PTAV  LR WTS +A+G
Sbjct: 134 PTAVQDLRKWTSTEAIG 150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,724
Number of Sequences: 2352
Number of extensions: 17783
Number of successful extensions: 59
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)