Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20107
         (796 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    28   0.38 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.6  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   8.2  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 288  PSMKQTQNSLPSYLSNLAPGFAMDPTQSNVKHTDGAIQNDENDL--HNQEAPQSQKVGGI 461
            PS   + +S PS    +  G A + + S+     G + NDEN+L  H   +P++   GG+
Sbjct: 870  PSSNSSPSSYPSP-DVVISGLASNNSSSSNLVAAGMVINDENNLHYHRSASPKATVAGGL 928


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 459 IFAFRPQGVPFPQPGMSHS*CRPGRSSARI 548
           I A    GVP P  G   + C P  S+ R+
Sbjct: 760 IVAAETAGVPVPPMGEDEAHCEPAESAKRL 789


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 303 TQN-SLPSYLSNLAPGFAMDPTQSNVKHTDGAIQNDEND 416
           T+N ++PS+  +L P   +DPT       +GA+ N++ D
Sbjct: 138 TKNLNIPSFF-DLFPDSFVDPTVIPKLREEGAVVNNQRD 175


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,701
Number of Sequences: 2352
Number of extensions: 13427
Number of successful extensions: 44
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)