Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0020X.Seq
         (534 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.    132   9e-33
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   3.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.5  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score =  132 bits (318), Expect = 9e-33
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 61  IQKESTLH 68



 Score =  132 bits (318), Expect = 9e-33
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 137 IQKESTLH 144



 Score =  132 bits (318), Expect = 9e-33
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = +3

Query: 12  MXIFVKTLTGKTITLEVEPSDTIENVKATIQDKEGIPPNQQRLIFAGEQLEDGRTLSEYN 191
           M IFVKTLTGKTITLEVEPSDTIENVKA IQDKEGIPP+QQRLIFAG+QLEDGRTLS+YN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 192 IQKESTLH 215
           IQKESTLH
Sbjct: 213 IQKESTLH 220


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 176 PLGVQYPEGIHPPPGV 223
           P GV  P G H PPG+
Sbjct: 5   PPGVNRPPGSHRPPGL 20


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -1

Query: 237 HHEASTPGGGWIPSGYCTPRGYVHLPAALQQRSTAV 130
           HH A  P  G  P     P+   H P A   RS+AV
Sbjct: 824 HHAAQQPPPGSHPGAQTQPQLSQHPPGA-SGRSSAV 858


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,819
Number of Sequences: 2352
Number of extensions: 11234
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)