Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0003X.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   5.0  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    23   8.8  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   8.8  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 529 GSAHISPKVQPDAPFTAALSAAGVVVTRT*PLHLP 425
           G A +SP  Q   P  A+ S   V    + P+H+P
Sbjct: 98  GGAVVSPATQIVPPSAASESPGSVSSQPSGPIHIP 132


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 295 PKNLIRVMVHVVGHALIDG 239
           PKN I+ + H  GH ++ G
Sbjct: 97  PKNTIKTLKHGGGHVMVWG 115


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 295 PKNLIRVMVHVVGHALIDG 239
           PKN I+ + H  GH ++ G
Sbjct: 169 PKNTIKTLSHGGGHVMVWG 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,285
Number of Sequences: 2352
Number of extensions: 11116
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)