Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301B05f
         (356 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   0.85 
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   3.4  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           23   4.5  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   4.5  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   4.5  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    22   6.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    22   7.9  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 172 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLH 273
           +L+ E L  G   CN +  K CGK   HIR   H
Sbjct: 487 RLTFERLSGG---CNLHRCKLCGKVVTHIRNHYH 517


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -3

Query: 78  RYTPTEPRFRIRFIFAVPVASCWPAP 1
           R TP+ PR        VP +S W  P
Sbjct: 48  RSTPSSPRLAQASTCPVPCSSIWSRP 73


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 121 TVDDFPLCVHLVSDEYEQL 177
           T +  P  +HL+ +EY++L
Sbjct: 84  TCETLPSEIHLIKEEYDEL 102


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 239 PQFFTRYLLQQIRPASKASELSCSYSSDTKCT 144
           PQ F   L QQ +P S  +  SC Y+S+   T
Sbjct: 106 PQKFL--LSQQQQPQSALTSQSCKYASEGPST 135


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 251 N*SFPQFFTRYLLQQIRPASKASELSCSY 165
           N +FP  + R  L  I    K S +SCSY
Sbjct: 462 NGTFPAAWKRQRLVLIPKPGKPSGVSCSY 490


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 82   PKIRIFDLGKKRATVD 129
            P I +++  KKRAT+D
Sbjct: 1103 PDILVYEKRKKRATID 1118


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 167 YSSDTKCTHSGKSST 123
           Y+S TK TH+ KS T
Sbjct: 474 YNSKTKSTHTPKSIT 488


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,914
Number of Sequences: 2352
Number of extensions: 8887
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)