Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301A06f
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   3.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   9.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   9.5  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    22   9.5  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    22   9.5  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            22   9.5  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 213 YRRTDKHPNEFRIL-CNLLIGTTSLCLFLVFLLCMSDILGNSSICLRTY 356
           +R+ ++    FR+  CNLLIGT+ L   +    C   I  NS    R+Y
Sbjct: 597 HRKQEEVLKRFRMHECNLLIGTSVLEEGIELPKCNLVIRWNSPANYRSY 645


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = -3

Query: 190  QNLHIHRFKKTIKEHLCNKAYYKVNDYLEDCTKW 89
            Q+ + H  K  + + +  +    V  + E CT+W
Sbjct: 2352 QHRYSHHLKLMLSKAISARKGLDVKTFEEKCTRW 2385


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = -3

Query: 190  QNLHIHRFKKTIKEHLCNKAYYKVNDYLEDCTKW 89
            Q+ + H  K  + + +  +    V  + E CT+W
Sbjct: 2362 QHRYSHHLKLMLSKAISARKGLDVKTFEEKCTRW 2395


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 267 IGTTSLCLFLVFLLC 311
           + T  +C+ +VFLLC
Sbjct: 309 LATMLICVVIVFLLC 323


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 352 VRKHIEEFPKMSDIHNRNTRNKHKLV 275
           V  H+ E+PK   I N   R + KL+
Sbjct: 426 VEIHLLEYPKDPSITNVTVRIEEKLI 451


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 13/60 (21%), Positives = 29/60 (48%)
 Frame = -1

Query: 288  NTSLLCR*VGYIRYEIHSGVCLCACTTKSHKMFRTYIYIGLRKLLKNICAIKLTIKSMII 109
            N  LL + +  IR   ++  C C   T+  +  +TY ++  R  ++  CA  ++  + ++
Sbjct: 904  NVWLLPKQLNDIRLAFNAWSCECDYVTRFQEYLKTYDFVRDRHKIR--CASYVSSNATVV 961


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,415
Number of Sequences: 2352
Number of extensions: 9180
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)