Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0040
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    27   0.46 
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    27   0.80 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.3  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   5.7  

>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 27.5 bits (58), Expect = 0.46
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +3

Query: 12  EAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 140
           + G Q    S+G+G+    +P + G G  +SG  +FGN  +GG
Sbjct: 121 QGGGQGGIPSFGSGQQNGGVPFL-GNGQGQSGFPSFGNGQQGG 162


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 26.6 bits (56), Expect = 0.80
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
 Frame = +1

Query: 634 GSWKTPSKQKKNFNLPQP------KMANTDLTRLLK 723
           G  K P K+KK  +LP+P      K  N DL ++LK
Sbjct: 153 GQSKQPKKKKKKRSLPKPEAVVIEKCENIDLAKVLK 188


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 635 PNKGSSLPNAD*VQMTKRPR*PPGA 561
           P  G   P    V M  RP+ PPGA
Sbjct: 212 PRPGGMYPQPPGVPMPMRPQMPPGA 236


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 142 RPPRHMLPKAP*PDLWVPPPRTRGIRATARP 50
           RPP H  P       W+ PP  R   +TA P
Sbjct: 93  RPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,725
Number of Sequences: 2352
Number of extensions: 15442
Number of successful extensions: 62
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)