Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C11
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          24   3.7  
AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    24   3.7  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = +2

Query: 443 SDSIEKSTVESTLQKENSSQTEK--TVL---NITDDKGENDKDNTLEDNEKT 583
           S S      +S  Q+++S Q ++  T+L   N+++ +GEN    TL+D   T
Sbjct: 132 SHSQHSQQQQSPQQQQSSQQLQQPLTILVPKNLSNSQGENSVTYTLDDLSNT 183


>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 13/61 (21%), Positives = 26/61 (42%)
 Frame = +2

Query: 455 EKSTVESTLQKENSSQTEKTVLNITDDKGENDKDNTLEDNEKTKKPSKSITDSSTWGEYA 634
           + S ++S +++          ++  DD+ E  KD+  ED+E+  +           GE  
Sbjct: 100 DDSEMDSAMKEGEEGAGSDDAVSGADDETEESKDDAEEDSEEGGEEGGDSASGGEGGEKE 159

Query: 635 S 637
           S
Sbjct: 160 S 160


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,665
Number of Sequences: 2352
Number of extensions: 10342
Number of successful extensions: 49
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)