Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a07f
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative odorant-b...    28   0.27 
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    23   5.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   5.8  

>AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative
           odorant-binding protein OBPjj11 protein.
          Length = 135

 Score = 27.9 bits (59), Expect = 0.27
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +3

Query: 162 QFTGFSEDDLERIKSGET 215
           Q TG SEDD+ R++SG+T
Sbjct: 38  QQTGASEDDVNRLRSGDT 55


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3

Query: 72  SMSFAIFYINAPYMKNITLTYLCKNK*NMSQFTGFSEDD 188
           S++F I+ I     K I L   CK +   S   G   DD
Sbjct: 357 SVNFFIYVIFGEKFKRIFLLLFCKPRGRQSPDDGLIHDD 395


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 405  AKMEEDKQNQVILQNNVEGNDEVQVDTIEADKSD 506
            A +E  K+N+V      +  DEVQ   +E ++ +
Sbjct: 1335 ANVENAKENEVAANVENQNEDEVQPMEVEEERDE 1368


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,926
Number of Sequences: 2352
Number of extensions: 10109
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)